Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p03560 Brassica napus HOM05D009749 ORTHO05D008033 7.7e-186 653.7 329 100.0
C04p35700 Brassica napus HOM05D009749 ORTHO05D008033 8.5e-169 597.0 329 91.2
BraA04t16080Z Brassica rapa HOM05D009749 ORTHO05D008033 1.9e-168 595.9 333 92.2
BolC4t25234H Brassica oleracea HOM05D009749 ORTHO05D008033 1.4e-166 589.7 338 89.1
BcaB02g08346 Brassica carinata HOM05D009749 ORTHO05D008033 2.3e-145 519.2 330 82.4
Sp5g05780 Schrenkiella parvula HOM05D009749 ORTHO05D008033 2.9e-145 518.8 336 81.2
A09p49630 Brassica napus HOM05D009749 ORTHO05D008033 1.3e-137 493.4 335 77.0
BraA09t40416Z Brassica rapa HOM05D009749 ORTHO05D008033 1.3e-137 493.4 335 77.0
C08p32040 Brassica napus HOM05D009749 ORTHO05D008033 7.3e-136 487.6 335 76.4
BcaC07g39991 Brassica carinata HOM05D009749 ORTHO05D008033 9.5e-136 487.3 335 76.7
BolC8t50822H Brassica oleracea HOM05D009749 ORTHO05D008033 9.5e-136 487.3 335 76.7
AL5G38190 Arabidopsis lyrata HOM05D009749 ORTHO05D008033 7.5e-125 451.1 340 73.8
BolC6t37547H Brassica oleracea HOM05D009749 ORTHO05D008033 2.2e-124 449.5 335 73.4
AT3G56810 Arabidopsis thaliana HOM05D009749 ORTHO05D008033 1.4e-123 446.8 342 72.5
BcaC08g44807 Brassica carinata HOM05D009749 ORTHO05D008033 1.9e-123 446.4 333 73.6
C06p23780 Brassica napus HOM05D009749 ORTHO05D008033 1.9e-123 446.4 333 73.9
BcaB02g07636 Brassica carinata HOM05D009749 ORTHO05D008033 3.2e-123 445.7 333 74.2
CARHR166960 Cardamine hirsuta HOM05D009749 ORTHO05D008033 1.5e-120 436.8 339 71.4
A07p23080 Brassica napus HOM05D009749 ORTHO05D008033 3.1e-118 429.1 339 71.4
BraA07t29970Z Brassica rapa HOM05D009749 ORTHO05D008033 3.1e-118 429.1 339 71.4
BcaC02g09872 Brassica carinata HOM05D009749 ORTHO05D008033 8.4e-116 421.0 236 91.1
BcaC07g40118 Brassica carinata HOM05D009749 ORTHO05D008033 7.3e-112 407.9 344 69.5
Carub.0005s2354 Capsella rubella HOM05D009749 ORTHO05D008033 1.5e-109 400.2 343 68.8
Thhalv10006250m.g Eutrema salsugineum HOM05D009749 ORTHO05D008033 3.4e-61 239.6 179 73.2
Thhalv10006450m.g Eutrema salsugineum HOM05D009749 ORTHO05D008033 2.2e-52 210.3 157 75.8
THA.LOC104803305 Tarenaya hassleriana HOM05D009749 ORTHO05D008033 8.5e-52 208.4 325 45.8
Aa31LG10G11650 Aethionema arabicum HOM05D009749 ORTHO05D008033 3.8e-36 156.4 145 62.8
PGR142G2092 Punica granatum HOM05D007667 ORTHO05D008033 2.2e-15 87.4 436 25.7
Atru.chr8.918 Acer truncatum HOM05D007667 ORTHO05D008033 4.1e-14 83.2 342 27.5
MD12G1111200 Malus domestica HOM05D007667 ORTHO05D008033 3.0e-12 77.0 244 29.1
Eucgr.K01702 Eucalyptus grandis HOM05D007667 ORTHO05D008033 8.6e-12 75.5 281 26.7
Medtr7g087970 Medicago truncatula HOM05D007667 ORTHO05D008033 1.9e-11 74.3 388 26.3
TPR.G23684 Trifolium pratense HOM05D007667 ORTHO05D008033 2.5e-11 73.9 238 28.6
COL.COLO4_22773 Corchorus olitorius HOM05D007667 ORTHO05D008033 4.3e-11 73.2 314 26.8
CANSAT01G1982 Cannabis sativa HOM05D007667 ORTHO05D008033 1.6e-10 71.2 256 26.2
Duzib128G0300 Durio zibethinus HOM05D007667 ORTHO05D008033 1.6e-10 71.2 319 25.7
GSVIVG01025830001 Vitis vinifera HOM05D007667 ORTHO05D008033 2.8e-10 70.5 264 25.8
Glyma.03G003800 Glycine max HOM05D007667 ORTHO05D008033 4.7e-10 69.7 375 27.2
arahy.Tifrunner.gnm1.ann1.2JVN0K Arachis hypogaea HOM05D007667 ORTHO05D008033 6.2e-10 69.3 242 28.1
CSS0027019 Camellia sinensis var. sinensis HOM05D007667 ORTHO05D008033 6.2e-10 69.3 246 27.6
Haze_20347 Corylus avellana HOM05D007667 ORTHO05D008033 1.4e-09 68.2 228 24.6
Sabra16G0030500 Salix brachista HOM05D007667 ORTHO05D008033 1.4e-09 68.2 260 26.2
arahy.Tifrunner.gnm1.ann1.B2YDCU Arachis hypogaea HOM05D007667 ORTHO05D008033 2.3e-09 67.4 242 27.7
CiPaw.09G161700 Carya illinoinensis HOM05D007667 ORTHO05D008033 2.3e-09 67.4 395 25.6
Glyma.19G122200 Glycine max HOM05D007667 ORTHO05D008033 3.1e-09 67.0 378 26.5
Sabra06G0019700 Salix brachista HOM05D007667 ORTHO05D008033 3.1e-09 67.0 253 27.3
SalBow6G3030 Salvia bowleyana HOM05D007667 ORTHO05D008033 3.1e-09 67.0 92 39.1
SalBow6G3731 Salvia bowleyana HOM05D007667 ORTHO05D008033 3.1e-09 67.0 92 39.1
Oeu041986.1 Olea europaea HOM05D007667 ORTHO05D008033 4.0e-09 66.6 231 27.3
Manes.08G067300 Manihot esculenta HOM05D007667 ORTHO05D008033 5.2e-09 66.2 227 28.6
Phvul.001G101500 Phaseolus vulgaris HOM05D007667 ORTHO05D008033 5.2e-09 66.2 391 24.8
Ciclev10012153m.g Citrus clementina HOM05D007667 ORTHO05D008033 6.8e-09 65.9 391 25.8
Potri.016G024600 Populus trichocarpa HOM05D007667 ORTHO05D008033 6.8e-09 65.9 196 30.6
Psat0s3111g0200 Pisum sativum HOM05D007667 ORTHO05D008033 8.9e-09 65.5 380 25.3
RcHm_v2.0_Chr3g0495051 Rosa chinensis HOM05D007667 ORTHO05D008033 8.9e-09 65.5 241 27.4
TWI77G1010 Tripterygium wilfordii HOM05D007667 ORTHO05D008033 8.9e-09 65.5 238 27.7
Oeu060747.1 Olea europaea HOM05D007667 ORTHO05D008033 2.6e-08 63.9 241 27.4
vmacro07594 Vaccinium macrocarpon HOM05D007667 ORTHO05D008033 3.4e-08 63.5 273 26.7
Lalb_Chr14g0365211 Lupinus albus HOM05D007667 ORTHO05D008033 4.4e-08 63.2 222 26.6
Migut.J01575 Erythranthe guttata HOM05D007667 ORTHO05D008033 7.5e-08 62.4 260 24.2
Lj1g0016001 Lotus japonicus HOM05D007667 ORTHO05D008033 7.5e-08 62.4 248 26.2
MSTRG.6277 Avicennia marina HOM05D007667 ORTHO05D008033 9.9e-08 62.0 92 38.0
RhsimUnG0021200 Rhododendron simsii HOM05D007667 ORTHO05D008033 2.2e-07 60.8 235 27.2
VMungo1383G2866 Vigna mungo HOM05D007667 ORTHO05D008033 2.2e-07 60.8 289 25.6
Thecc.05G130400 Theobroma cacao HOM05D007667 ORTHO05D008033 2.9e-07 60.5 92 35.9
TAR623G0652 Trochodendron aralioides HOM05D007667 ORTHO05D008033 3.7e-07 60.1 263 27.8
DCAR_020622 Daucus carota HOM05D007667 ORTHO05D008033 4.9e-07 59.7 123 33.3
Potri.006G026600 Populus trichocarpa HOM05D007667 ORTHO05D008033 4.9e-07 59.7 252 25.0
Aqoxy3G03841 Aquilegia oxysepala HOM05D007667 ORTHO05D008033 6.4e-07 59.3 370 24.3
Ah.13g077440 Amaranthus hybridus HOM05D007667 ORTHO05D008033 8.3e-07 58.9 417 23.3
Cc06_g20370 Coffea canephora HOM05D007667 ORTHO05D008033 8.3e-07 58.9 236 24.6
QL07p015392 Quercus lobata HOM05D007667 ORTHO05D008033 8.3e-07 58.9 238 25.2
Sc13g0000730 Simmondsia chinensis HOM05D007667 ORTHO05D008033 8.3e-07 58.9 59 47.5
PGSC0003DMG400029088 Solanum tuberosum HOM05D007667 ORTHO05D008033 1.1e-06 58.5 318 23.6
SGA_v2.0_scaffold66G22329 Striga asiatica HOM05D007667 ORTHO05D008033 1.4e-06 58.2 347 22.8
Hund19052 Selenicereus undatus HOM05D007667 ORTHO05D008033 3.2e-06 57.0 276 24.6
Cfa019904 Carpinus fangiana HOM05D007667 ORTHO05D008033 4.1e-06 56.6 371 25.1


User provided reference genes

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