Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p02170 Brassica napus HOM05D006244 ORTHO05D007401 1.8e-162 575.9 290 100.0
BraA04t15944Z Brassica rapa HOM05D006244 ORTHO05D007401 4.3e-148 528.1 290 92.8
BcaB02g08221 Brassica carinata HOM05D006244 ORTHO05D007401 4.9e-144 514.6 290 90.0
C08p34500 Brassica napus HOM05D006244 ORTHO05D007401 2.1e-139 499.2 290 87.6
BolC8t51051H Brassica oleracea HOM05D006244 ORTHO05D007401 2.1e-139 499.2 290 87.6
Sp5g03670 Schrenkiella parvula HOM05D006244 ORTHO05D007401 2.9e-136 488.8 294 85.0
AT3G59490 Arabidopsis thaliana HOM05D006244 ORTHO05D007401 3.2e-135 485.3 294 84.7
BcaC07g40479 Brassica carinata HOM05D006244 ORTHO05D007401 4.2e-135 485.0 289 85.5
A09p51770 Brassica napus HOM05D006244 ORTHO05D007401 4.2e-135 485.0 290 85.5
AL5G41400 Arabidopsis lyrata HOM05D006244 ORTHO05D007401 1.7e-133 479.6 294 85.0
Thhalv10006132m.g Eutrema salsugineum HOM05D006244 ORTHO05D007401 2.3e-133 479.2 294 84.0
Carub.0005s2622 Capsella rubella HOM05D006244 ORTHO05D007401 1.9e-132 476.1 294 83.7
BraA09t40612Z Brassica rapa HOM05D006244 ORTHO05D007401 6.9e-130 467.6 287 82.9
BcaC07g40478 Brassica carinata HOM05D006244 ORTHO05D007401 1.5e-129 466.5 289 82.4
BcaNung05942 Brassica carinata HOM05D006244 ORTHO05D007401 2.0e-129 466.1 278 85.6
CARHR169870 Cardamine hirsuta HOM05D006244 ORTHO05D007401 3.4e-129 465.3 294 81.6
BolC4t24903H Brassica oleracea HOM05D006244 ORTHO05D007401 4.6e-126 454.9 290 81.7
Aa31LG10G13810 Aethionema arabicum HOM05D006244 ORTHO05D007401 5.5e-119 431.4 295 77.3
THA.LOC104803749 Tarenaya hassleriana HOM05D006244 ORTHO05D007401 1.0e-109 400.6 306 69.6
C04p33420 Brassica napus HOM05D006244 ORTHO05D007401 1.5e-108 396.7 290 74.8
QL10p050150 Quercus lobata HOM05D006244 ORTHO05D007401 1.3e-96 357.1 305 61.3
Cpa.g.sc9.298 Carica papaya HOM05D006244 ORTHO05D007401 2.2e-96 356.3 307 63.8
QL05p011148 Quercus lobata HOM05D006244 ORTHO05D007401 2.9e-96 355.9 305 61.3
TAR636G2962 Trochodendron aralioides HOM05D006244 ORTHO05D007401 2.1e-94 349.7 306 58.8
Cfa020094 Carpinus fangiana HOM05D006244 ORTHO05D007401 3.9e-93 345.5 306 60.8
Atru.chr4.1240 Acer truncatum HOM05D006244 ORTHO05D007401 5.1e-93 345.1 293 62.5
Duzib175G0007 Durio zibethinus HOM05D006244 ORTHO05D007401 4.4e-92 342.0 305 60.0
Dinv22748 Davidia involucrata HOM05D006244 ORTHO05D007401 7.4e-92 341.3 293 60.8
COL.COLO4_12977 Corchorus olitorius HOM05D006244 ORTHO05D007401 9.7e-92 340.9 329 56.8
Hma1.2p1_0324F.1_g125510 Hydrangea macrophylla HOM05D006244 ORTHO05D007401 4.8e-91 338.6 294 61.6
Gorai.011G141500 Gossypium raimondii HOM05D006244 ORTHO05D007401 6.3e-91 338.2 305 59.0
Duzib151G0743 Durio zibethinus HOM05D006244 ORTHO05D007401 1.1e-90 337.4 305 59.3
Ciclev10021382m.g Citrus clementina HOM05D006244 ORTHO05D007401 1.8e-90 336.7 299 59.5
Actinidia11297 Actinidia chinensis HOM05D006244 ORTHO05D007401 3.1e-90 335.9 299 59.2
Gohir.D10G128300 Gossypium hirsutum HOM05D006244 ORTHO05D007401 3.1e-90 335.9 305 58.7
Manes.04G043800 Manihot esculenta HOM05D006244 ORTHO05D007401 4.1e-90 335.5 307 57.3
CiPaw.02G053900 Carya illinoinensis HOM05D006244 ORTHO05D007401 1.3e-88 330.5 306 58.8
Potri.017G028900 Populus trichocarpa HOM05D006244 ORTHO05D007401 1.3e-88 330.5 300 57.0
FAN07G2433 Fragaria x ananassa HOM05D006244 ORTHO05D007401 1.7e-88 330.1 304 56.9
CSS0032343 Camellia sinensis var. sinensis HOM05D006244 ORTHO05D007401 6.5e-88 328.2 306 55.6
Gohir.A10G138500 Gossypium hirsutum HOM05D006244 ORTHO05D007401 6.5e-88 328.2 305 57.4
Hund03170 Selenicereus undatus HOM05D006244 ORTHO05D007401 7.2e-87 324.7 299 56.2
Sc19g0002910 Simmondsia chinensis HOM05D006244 ORTHO05D007401 7.2e-87 324.7 306 53.9
FvH4_4g10850 Fragaria vesca HOM05D006244 ORTHO05D007401 1.6e-86 323.6 301 56.8
FAN12G2117 Fragaria x ananassa HOM05D006244 ORTHO05D007401 1.6e-86 323.6 301 56.8
HanXRQChr11g0343701 Helianthus annuus HOM05D006244 ORTHO05D007401 7.9e-86 321.2 294 56.8
RcHm_v2.0_Chr4g0406631 Rosa chinensis HOM05D006244 ORTHO05D007401 7.9e-86 321.2 304 55.6
CANSAT78G1025 Cannabis sativa HOM05D006244 ORTHO05D007401 1.0e-85 320.9 305 55.7
Prupe.1G196900 Prunus persica HOM05D006244 ORTHO05D007401 3.0e-85 319.3 305 56.4
Sabra17G0017500 Salix brachista HOM05D006244 ORTHO05D007401 3.9e-85 318.9 300 56.0
Aqoxy2G04144 Aquilegia oxysepala HOM05D006244 ORTHO05D007401 5.2e-85 318.5 297 55.2
Eucgr.H00368 Eucalyptus grandis HOM05D006244 ORTHO05D007401 5.2e-85 318.5 309 55.0
Thecc.04G177000 Theobroma cacao HOM05D006244 ORTHO05D007401 6.7e-85 318.2 305 56.4
EL10Ac3g05981 Beta vulgaris HOM05D006244 ORTHO05D007401 1.1e-84 317.4 303 55.1
AUR62023861 Chenopodium quinoa HOM05D006244 ORTHO05D007401 1.5e-84 317.0 303 54.8
ECA248G0275 Erigeron canadensis HOM05D006244 ORTHO05D007401 1.5e-84 317.0 305 55.1
MELO3C009823.2 Cucumis melo HOM05D006244 ORTHO05D007401 2.0e-84 316.6 305 56.7
PSO675G8539 Papaver somniferum HOM05D006244 ORTHO05D007401 2.0e-84 316.6 312 54.8
Peaxi162Scf00126g00623 Petunia axillaris HOM05D006244 ORTHO05D007401 2.0e-84 316.6 308 54.9
Nitab4.5_0008822g0040 Nicotiana tabacum HOM05D006244 ORTHO05D007401 2.6e-84 316.2 306 56.2
Lsat_1_v5_gn_1_77900 Lactuca sativa HOM05D006244 ORTHO05D007401 5.7e-84 315.1 294 55.8
MD04G1042500 Malus domestica HOM05D006244 ORTHO05D007401 5.7e-84 315.1 303 55.4
CsaV3_3G040880 Cucumis sativus L. HOM05D006244 ORTHO05D007401 9.7e-84 314.3 305 56.1
SalBow3G2237 Salvia bowleyana HOM05D006244 ORTHO05D007401 9.7e-84 314.3 301 53.8
Lalb_Chr22g0352091 Lupinus albus HOM05D006244 ORTHO05D007401 4.8e-83 312.0 305 53.4
PSO732G0675 Papaver somniferum HOM05D006244 ORTHO05D007401 4.8e-83 312.0 299 55.2
GSVIVG01010791001 Vitis vinifera HOM05D006244 ORTHO05D007401 6.3e-83 311.6 297 55.6
Nitab4.5_0004117g0020 Nicotiana tabacum HOM05D006244 ORTHO05D007401 8.2e-83 311.2 306 55.6
Sopen11g020640 Solanum pennellii HOM05D006244 ORTHO05D007401 8.2e-83 311.2 307 54.1
Solyc11g045210.2 Solanum lycopersicum HOM05D006244 ORTHO05D007401 4.1e-82 308.9 307 54.4
PGSC0003DMG400022864 Solanum tuberosum HOM05D006244 ORTHO05D007401 1.2e-81 307.4 308 53.6
Rhsim09G0025200 Rhododendron simsii HOM05D006244 ORTHO05D007401 2.6e-81 306.2 363 46.6
Lj3g0008901 Lotus japonicus HOM05D006244 ORTHO05D007401 4.5e-81 305.4 304 53.6
MSTRG.9759 Avicennia marina HOM05D006244 ORTHO05D007401 5.9e-81 305.1 302 52.6
ClCG10G015550 Citrullus lanatus HOM05D006244 ORTHO05D007401 1.0e-80 304.3 304 54.6
Psat5g289400 Pisum sativum HOM05D006244 ORTHO05D007401 6.5e-80 301.6 294 53.1
TPR.G18836 Trifolium pratense HOM05D006244 ORTHO05D007401 6.5e-80 301.6 297 53.9
TWI38G0370 Tripterygium wilfordii HOM05D006244 ORTHO05D007401 8.5e-80 301.2 307 52.4
Ah.07g202200 Amaranthus hybridus HOM05D006244 ORTHO05D007401 1.9e-79 300.1 302 50.7
CAN.G31.8 Capsicum annuum HOM05D006244 ORTHO05D007401 1.9e-79 300.1 308 53.6
Medtr2g098960 Medicago truncatula HOM05D006244 ORTHO05D007401 4.2e-79 298.9 294 52.7
Cc07_g21300 Coffea canephora HOM05D006244 ORTHO05D007401 2.7e-78 296.2 299 53.8
unitig_0.g2404 Utricularia gibba HOM05D006244 ORTHO05D007401 3.6e-78 295.8 294 50.7
AUR62002326 Chenopodium quinoa HOM05D006244 ORTHO05D007401 4.7e-78 295.4 303 52.8
PGR142G0422 Punica granatum HOM05D006244 ORTHO05D007401 4.7e-78 295.4 305 54.1
Migut.G01000 Erythranthe guttata HOM05D006244 ORTHO05D007401 1.0e-77 294.3 290 51.7
Glyma.15G029700 Glycine max HOM05D006244 ORTHO05D007401 3.3e-76 289.3 304 52.3
arahy.Tifrunner.gnm1.ann1.LPC3IP Arachis hypogaea HOM05D006244 ORTHO05D007401 2.2e-75 286.6 305 50.5
MBI08_g33169_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 3.5e-73 279.3 277 54.5
ATR0743G009 Amborella trichopoda HOM05D006244 ORTHO05D007401 1.0e-69 267.7 298 49.0
arahy.Tifrunner.gnm1.ann1.IE55HN Arachis hypogaea HOM05D006244 ORTHO05D007401 1.0e-69 267.7 294 49.0
Nn3g18564 Nelumbo nucifera HOM05D006244 ORTHO05D007401 1.0e-69 267.7 302 48.3
HPP92_001264 Vanilla planifolia HOM05D006244 ORTHO05D007401 6.8e-69 265.0 313 45.0
HPP92_001248 Vanilla planifolia HOM05D006244 ORTHO05D007401 1.2e-68 264.2 313 45.0
C04p32460 Brassica napus HOM05D006244 ORTHO05D007401 8.0e-62 241.5 192 68.2
VMungo1080G0762 Vigna mungo HOM05D006244 ORTHO05D007401 3.4e-60 236.1 261 49.4
Actinidia27645 Actinidia chinensis HOM05D006244 ORTHO05D007401 3.5e-57 226.1 207 59.4
DCAR_028445 Daucus carota HOM05D006244 ORTHO05D007401 5.0e-56 222.2 265 45.3
Sed0026513 Sechium edule HOM05D006244 ORTHO05D007401 5.0e-56 222.2 234 54.3
Phvul.005G153400 Phaseolus vulgaris HOM05D006244 ORTHO05D007401 4.7e-54 215.7 307 42.3
Lju337A6T20 Lonicera japonica HOM05D006244 ORTHO05D007401 8.3e-51 204.9 264 45.8
FAN17G1708 Fragaria x ananassa HOM05D006244 ORTHO05D007401 1.2e-49 201.1 199 54.3
vmacro00644 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 8.6e-48 194.9 201 52.7
Cfa015178 Carpinus fangiana HOM05D006244 ORTHO05D007401 2.5e-39 166.8 170 57.6
Zm00001eb318410 Zea mays HOM05D006244 ORTHO05D007401 1.2e-38 164.5 248 40.3
MBI08_g09972_MAGBIO Magnolia biondii HOM05D006244 ORTHO05D007401 5.8e-36 155.6 193 47.7
vmacro00645 Vaccinium macrocarpon HOM05D006244 ORTHO05D007401 2.7e-33 146.7 105 62.9
BcaC02g10138 Brassica carinata HOM05D006244 ORTHO05D007401 6.8e-29 132.1 245 41.2
Pp3c9_3600 Physcomitrium patens HOM05D006244 ORTHO05D007401 1.9e-26 124.0 302 29.1
Psat5g289440 Pisum sativum HOM05D006244 ORTHO05D007401 4.6e-25 119.4 125 51.2
Lj6A77G23 Lonicera japonica HOM05D006244 ORTHO05D007401 2.2e-19 100.5 94 56.4
Peaxi162Scf01193g00009 Petunia axillaris HOM05D006244 ORTHO05D007401 4.9e-19 99.4 127 45.7
Os09g0515300 Oryza sativa ssp. japonica HOM05D006244 ORTHO05D007401 6.4e-19 99.0 111 47.7
Sabra17G0062000 Salix brachista HOM05D006244 ORTHO05D007401 6.4e-19 99.0 120 48.3
Peaxi162Scf00533g00611 Petunia axillaris HOM05D006244 ORTHO05D007401 1.4e-18 97.8 127 44.9
Peaxi162Scf00066g02019 Petunia axillaris HOM05D006244 ORTHO05D007401 2.4e-18 97.1 127 44.9
Lj6C77T3 Lonicera japonica HOM05D006244 ORTHO05D007401 1.0e-16 91.7 65 64.6
SMO364G0376 Selaginella moellendorffii HOM05D006244 ORTHO05D007401 1.0e-16 91.7 270 28.1
Lju337A6G22 Lonicera japonica HOM05D006244 ORTHO05D007401 1.3e-16 91.3 65 63.1
Peaxi162Scf00272g00041 Petunia axillaris HOM05D006244 ORTHO05D007401 3.9e-16 89.7 120 43.3
Peaxi162Scf00627g00001 Petunia axillaris HOM05D006244 ORTHO05D007401 3.3e-15 86.7 120 42.5
Peaxi162Scf00404g00815 Petunia axillaris HOM05D006244 ORTHO05D007401 3.6e-14 83.2 130 43.1
Glyma.13G344600 Glycine max HOM05D006244 ORTHO05D007401 1.1e-13 81.6 68 54.4
Zm00001eb239190 Zea mays HOM05D001072 ORTHO05D007401 2.6e-12 77.0 79 46.8
AagrBONN_evm.TU.Sc2ySwM_228.3866 Anthoceros agrestis HOM05D006244 ORTHO05D007401 9.3e-10 68.6 113 38.1


User provided reference genes

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