Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p01960 Brassica napus HOM05D000003 ORTHO05D001498 6.8e-47 190.3 93 100.0
BraA04t15921Z Brassica rapa HOM05D000003 ORTHO05D001498 6.8e-47 190.3 93 100.0
A01p29670 Brassica napus HOM05D000003 ORTHO05D001498 2.7e-27 125.2 60 98.3
BraA06t24982Z Brassica rapa HOM05D000003 ORTHO05D001498 4.7e-24 114.4 91 65.9
BolC9t59471H Brassica oleracea HOM05D000003 ORTHO05D027495 5.8e-22 107.5 91 59.3
BcaC08g45793 Brassica carinata HOM05D000003 ORTHO05D027495 4.9e-21 104.4 91 56.0
C09p66950 Brassica napus HOM05D000003 ORTHO05D027495 5.6e-17 90.9 83 55.4
BcaB08g36133 Brassica carinata HOM05D000003 ORTHO05D001498 4.4e-14 81.3 93 47.3
BcaC06g35612 Brassica carinata HOM05D000003 ORTHO05D001498 2.2e-13 79.0 93 46.2
BcaC08g43530 Brassica carinata HOM05D000003 ORTHO05D001498 3.8e-13 78.2 93 45.2
BolC3t17146H Brassica oleracea HOM05D000003 ORTHO05D027495 2.4e-12 75.5 76 51.3
BcaB07g33176 Brassica carinata HOM05D000003 ORTHO05D001498 3.2e-12 75.1 93 43.0
BcaB08g34832 Brassica carinata HOM05D000003 ORTHO05D001498 7.1e-12 73.9 91 44.0
BcaB06g26978 Brassica carinata HOM05D000003 ORTHO05D001498 1.2e-11 73.2 91 44.0
BcaC07g36989 Brassica carinata HOM05D000003 ORTHO05D013515 3.5e-11 71.6 91 44.0
BcaB04g17934 Brassica carinata HOM05D000003 ORTHO05D012821 3.0e-10 68.6 91 41.8
BcaB08g34533 Brassica carinata HOM05D000003 ORTHO05D027432 6.6e-10 67.4 91 39.6
BolC1t05416H Brassica oleracea HOM05D000003 ORTHO05D027432 6.6e-10 67.4 91 37.4
BolC2t10508H Brassica oleracea HOM05D000003 ORTHO05D001498 8.7e-10 67.0 93 39.8
BcaNung04032 Brassica carinata HOM05D000003 ORTHO05D001498 1.5e-09 66.2 93 35.5
C04p57830 Brassica napus HOM05D011995 ORTHO05D013945 3.3e-09 65.1 91 38.5
BcaC07g39702 Brassica carinata HOM05D000003 ORTHO05D001498 4.3e-09 64.7 91 37.4
A02p21860 Brassica napus HOM05D000003 ORTHO05D001498 4.3e-09 64.7 93 39.8
CARHR034550 Cardamine hirsuta HOM05D000003 ORTHO05D001498 5.6e-09 64.3 93 36.6
BcaB02g07030 Brassica carinata HOM05D000003 ORTHO05D015466 9.6e-09 63.5 91 38.5
BcaB08g36524 Brassica carinata HOM05D000003 ORTHO05D001498 9.6e-09 63.5 97 42.3
BolC5t30456H Brassica oleracea HOM05D000003 ORTHO05D001498 9.6e-09 63.5 86 45.3
BolC8t52720H Brassica oleracea HOM05D000003 ORTHO05D001498 9.6e-09 63.5 97 41.2
BraA09t37716Z Brassica rapa HOM05D000003 ORTHO05D001498 1.3e-08 63.2 91 38.5
C04p71340 Brassica napus HOM05D001240 ORTHO05D002450 1.6e-08 62.8 92 38.0
BolC3t17202H Brassica oleracea HOM05D000003 ORTHO05D001498 1.6e-08 62.8 91 41.8
CARHR219240 Cardamine hirsuta HOM05D000003 ORTHO05D001498 1.6e-08 62.8 91 37.4
BolC7t42070H Brassica oleracea HOM05D000003 ORTHO05D001498 2.1e-08 62.4 91 36.3
BolC7t42817H Brassica oleracea HOM05D000003 ORTHO05D000004 2.1e-08 62.4 94 40.4
BcaC05g27568 Brassica carinata HOM05D000003 ORTHO05D001498 3.6e-08 61.6 91 37.4
C05p35510 Brassica napus HOM05D000003 ORTHO05D001498 3.6e-08 61.6 91 37.4
BcaC03g14008 Brassica carinata HOM05D000003 ORTHO05D001498 4.8e-08 61.2 91 41.8
BcaC09g50790 Brassica carinata HOM05D000003 ORTHO05D001498 4.8e-08 61.2 91 37.4
BcaB05g24145 Brassica carinata HOM05D000003 ORTHO05D001498 8.1e-08 60.5 93 39.8
BcaC08g44166 Brassica carinata HOM05D000003 ORTHO05D001498 8.1e-08 60.5 93 35.5
BcaB02g11015 Brassica carinata HOM05D000003 ORTHO05D000004 1.1e-07 60.1 92 41.3
BcaB06g26572 Brassica carinata HOM05D000003 ORTHO05D001498 1.1e-07 60.1 95 37.9
BcaB07g33055 Brassica carinata HOM05D000003 ORTHO05D001498 1.8e-07 59.3 97 41.2
BolC9t55555H Brassica oleracea HOM05D017055 ORTHO05D021777 1.8e-07 59.3 75 42.7
BcaB05g22683 Brassica carinata HOM05D000003 ORTHO05D001498 2.4e-07 58.9 93 33.3
BcaC09g48324 Brassica carinata HOM05D000003 ORTHO05D000004 2.4e-07 58.9 91 38.5
BraA04t16438Z Brassica rapa HOM05D000003 ORTHO05D001498 2.4e-07 58.9 91 39.6
BcaB03g16306 Brassica carinata HOM05D000003 ORTHO05D027432 3.1e-07 58.5 89 36.0
BcaC09g49939 Brassica carinata HOM05D010545 ORTHO05D001498 3.1e-07 58.5 93 33.3
BolC3t15769H Brassica oleracea HOM05D000003 ORTHO05D001498 3.1e-07 58.5 91 36.3
BcaB01g03556 Brassica carinata HOM05D000003 ORTHO05D001498 5.3e-07 57.8 91 35.2
BcaB04g18458 Brassica carinata HOM05D000003 ORTHO05D001498 5.3e-07 57.8 91 34.1
BcaNung01080 Brassica carinata HOM05D000003 ORTHO05D001498 5.3e-07 57.8 93 36.6
BraA01t02966Z Brassica rapa HOM05D000003 ORTHO05D014927 5.3e-07 57.8 93 36.6
BcaC02g09323 Brassica carinata HOM05D027210 ORTHO05D021777 6.9e-07 57.4 91 35.2
BcaNung05100 Brassica carinata HOM05D000003 ORTHO05D001498 6.9e-07 57.4 91 37.4
BcaB08g35608 Brassica carinata HOM05D000003 ORTHO05D001498 9.0e-07 57.0 91 39.6
C06p16520 Brassica napus HOM05D000003 ORTHO05D001498 9.0e-07 57.0 90 35.6
BolC6t36855H Brassica oleracea HOM05D000003 ORTHO05D001498 9.0e-07 57.0 90 35.6
BcaB03g12474 Brassica carinata HOM05D000003 ORTHO05D001498 1.2e-06 56.6 91 39.6
BcaC04g23343 Brassica carinata HOM05D000003 ORTHO05D001498 1.2e-06 56.6 91 36.3
A09p30440 Brassica napus HOM05D017055 ORTHO05D021777 1.2e-06 56.6 75 44.0
BraA09t39092Z Brassica rapa HOM05D000003 ORTHO05D001498 1.5e-06 56.2 93 37.6
BolC7t46481H Brassica oleracea HOM05D000003 ORTHO05D001498 2.0e-06 55.8 93 37.6
BcaB04g17723 Brassica carinata HOM05D000003 ORTHO05D001498 2.6e-06 55.5 93 37.6
BcaB07g33879 Brassica carinata HOM05D000003 ORTHO05D015466 2.6e-06 55.5 95 38.9
BolC1t04389H Brassica oleracea HOM05D000003 ORTHO05D001498 4.4e-06 54.7 93 29.0
BcaC01g02365 Brassica carinata HOM05D000003 ORTHO05D001498 5.8e-06 54.3 91 34.1
BcaC02g12052 Brassica carinata HOM05D000003 ORTHO05D001498 5.8e-06 54.3 95 34.7
BcaB07g32767 Brassica carinata HOM05D000003 ORTHO05D001498 7.6e-06 53.9 91 31.9
BcaC08g45914 Brassica carinata HOM05D000003 ORTHO05D001498 7.6e-06 53.9 91 31.9
BcaB03g16045 Brassica carinata HOM05D000003 ORTHO05D001498 9.9e-06 53.5 91 36.3


User provided reference genes

Program Settings