Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p01540 Brassica napus HOM05D005329 ORTHO05D041517 3.5e-21 104.0 51 100.0
BraA04t15874Z Brassica rapa HOM05D005329 ORTHO05D041517 2.9e-15 84.3 53 84.9
BcaC07g40582 Brassica carinata HOM05D005329 ORTHO05D006858 1.1e-14 82.4 44 90.9
C08p35570 Brassica napus HOM05D005329 ORTHO05D006858 1.1e-14 82.4 44 90.9
BolC8t51147H Brassica oleracea HOM05D005329 ORTHO05D006858 1.1e-14 82.4 44 90.9
AT3G60620 Arabidopsis thaliana HOM05D005329 ORTHO05D006858 1.4e-14 82.0 44 88.6
Carub.0005s2735 Capsella rubella HOM05D005329 ORTHO05D006858 1.4e-14 82.0 44 88.6
Thhalv10006014m.g Eutrema salsugineum HOM05D005329 ORTHO05D006858 1.4e-14 82.0 44 88.6
Sp5g02620 Schrenkiella parvula HOM05D005329 ORTHO05D006858 1.4e-14 82.0 44 88.6
A09p52830 Brassica napus HOM05D005329 ORTHO05D006858 3.5e-13 77.4 45 86.7
BraA09t40715Z Brassica rapa HOM05D005329 ORTHO05D006858 3.5e-13 77.4 45 86.7
SGA_v2.0_scaffold153G36970 Striga asiatica HOM05D005329 ORTHO05D006858 1.7e-12 75.1 48 79.2
Dinv44120 Davidia involucrata HOM05D005329 ORTHO05D006858 2.3e-12 74.7 40 87.5
SalBow5G1302 Salvia bowleyana HOM05D005329 ORTHO05D006858 2.3e-12 74.7 40 87.5
Lj6g0011922 Lotus japonicus HOM05D005329 ORTHO05D006858 3.9e-12 73.9 48 79.2
Nitab4.5_0000859g0250 Nicotiana tabacum HOM05D005329 ORTHO05D006858 3.9e-12 73.9 41 85.4
Nitab4.5_0012722g0010 Nicotiana tabacum HOM05D005329 ORTHO05D006858 3.9e-12 73.9 41 85.4
AL4G44260 Arabidopsis lyrata HOM05D005329 ORTHO05D006858 5.1e-12 73.6 49 73.5
MSTRG.20729 Avicennia marina HOM05D005329 ORTHO05D006858 5.1e-12 73.6 41 85.4
BcaB01g03288 Brassica carinata HOM05D005329 ORTHO05D006858 5.1e-12 73.6 49 73.5
Carub.0004s2776 Capsella rubella HOM05D005329 ORTHO05D006858 5.1e-12 73.6 49 73.5
CiPaw.14G025800 Carya illinoinensis HOM05D005329 ORTHO05D006858 5.1e-12 73.6 41 85.4
Thhalv10001472m.g Eutrema salsugineum HOM05D005329 ORTHO05D006858 5.1e-12 73.6 49 73.5
Sp4g27210 Schrenkiella parvula HOM05D005329 ORTHO05D006858 5.1e-12 73.6 49 73.5
THA.LOC104817220 Tarenaya hassleriana HOM05D005329 ORTHO05D006858 5.1e-12 73.6 48 77.1
Aqoxy7G00752 Aquilegia oxysepala HOM05D005329 ORTHO05D006858 6.6e-12 73.2 48 79.2
CAN.G1469.16 Capsicum annuum HOM05D005329 ORTHO05D006858 6.6e-12 73.2 41 82.9
Cfa011170 Carpinus fangiana HOM05D005329 ORTHO05D006858 6.6e-12 73.2 41 82.9
COL.COLO4_12491 Corchorus olitorius HOM05D005329 ORTHO05D006858 6.6e-12 73.2 41 82.9
Haze_02679 Corylus avellana HOM05D005329 ORTHO05D006858 6.6e-12 73.2 41 82.9
ECA236G3830 Erigeron canadensis HOM05D005329 ORTHO05D006858 6.6e-12 73.2 48 79.2
Gohir.D07G152900 Gossypium hirsutum HOM05D005329 ORTHO05D006858 6.6e-12 73.2 41 82.9
Gorai.001G175000 Gossypium raimondii HOM05D005329 ORTHO05D006858 6.6e-12 73.2 41 82.9
Lsat_1_v5_gn_7_9240 Lactuca sativa HOM05D005329 ORTHO05D006858 6.6e-12 73.2 48 79.2
Peaxi162Scf00803g00018 Petunia axillaris HOM05D005329 ORTHO05D006858 6.6e-12 73.2 41 82.9
Pp3c5_19250 Physcomitrium patens HOM05D005329 ORTHO05D006858 6.6e-12 73.2 49 73.5
Solyc01g090940.3 Solanum lycopersicum HOM05D005329 ORTHO05D006858 6.6e-12 73.2 41 82.9
Sopen01g036670 Solanum pennellii HOM05D005329 ORTHO05D006858 6.6e-12 73.2 41 82.9
Thecc.01G382500 Theobroma cacao HOM05D005329 ORTHO05D006858 6.6e-12 73.2 41 82.9
TWI23G1139 Tripterygium wilfordii HOM05D005329 ORTHO05D006858 6.6e-12 73.2 41 82.9
Atru.chr5.253 Acer truncatum HOM05D005329 ORTHO05D006858 8.7e-12 72.8 48 77.1
arahy.Tifrunner.gnm1.ann1.6F7D9A Arachis hypogaea HOM05D005329 ORTHO05D006858 8.7e-12 72.8 48 77.1
arahy.Tifrunner.gnm1.ann1.UJ6N0S Arachis hypogaea HOM05D005329 ORTHO05D006858 8.7e-12 72.8 48 77.1
Ciclev10020384m.g Citrus clementina HOM05D005329 ORTHO05D006858 8.7e-12 72.8 48 77.1
Migut.B01596 Erythranthe guttata HOM05D005329 ORTHO05D006858 8.7e-12 72.8 48 77.1
FvH4_7g11110 Fragaria vesca HOM05D005329 ORTHO05D006858 8.7e-12 72.8 48 77.1
FAN01G1917 Fragaria x ananassa HOM05D005329 ORTHO05D006858 8.7e-12 72.8 48 77.1
FAN03G0115 Fragaria x ananassa HOM05D005329 ORTHO05D006858 8.7e-12 72.8 48 77.1
FAN06G0681 Fragaria x ananassa HOM05D005329 ORTHO05D006858 8.7e-12 72.8 48 77.1
FAN06G1173 Fragaria x ananassa HOM05D005329 ORTHO05D006858 8.7e-12 72.8 48 77.1
FAN10G0345 Fragaria x ananassa HOM05D005329 ORTHO05D006858 8.7e-12 72.8 48 77.1
FAN10G0671 Fragaria x ananassa HOM05D005329 ORTHO05D006858 8.7e-12 72.8 48 77.1
Hma1.2p1_0072F.1_g038340 Hydrangea macrophylla HOM05D005329 ORTHO05D006858 8.7e-12 72.8 48 77.1
Manes.01G269000 Manihot esculenta HOM05D005329 ORTHO05D006858 8.7e-12 72.8 48 77.1
Nn6g33989 Nelumbo nucifera HOM05D005329 ORTHO05D006858 8.7e-12 72.8 48 77.1
RcHm_v2.0_Chr1g0349131 Rosa chinensis HOM05D005329 ORTHO05D006858 8.7e-12 72.8 48 77.1
TAR375G0089 Trochodendron aralioides HOM05D005329 ORTHO05D006858 8.7e-12 72.8 48 77.1
Aa31LG1G26700 Aethionema arabicum HOM05D005329 ORTHO05D006858 1.1e-11 72.4 48 75.0
Ah.04g166190 Amaranthus hybridus HOM05D005329 ORTHO05D006858 1.1e-11 72.4 40 85.0
AT2G45150 Arabidopsis thaliana HOM05D005329 ORTHO05D006858 1.1e-11 72.4 49 71.4
BcaC01g05155 Brassica carinata HOM05D005329 ORTHO05D006858 1.1e-11 72.4 49 73.5
C03p29890 Brassica napus HOM05D005329 ORTHO05D006858 1.1e-11 72.4 49 73.5
BolC3t15336H Brassica oleracea HOM05D005329 ORTHO05D006858 1.1e-11 72.4 49 73.5
CANSAT56G1088 Cannabis sativa HOM05D005329 ORTHO05D006858 1.1e-11 72.4 41 82.9
CANSAT56G2474 Cannabis sativa HOM05D005329 ORTHO05D006858 1.1e-11 72.4 41 82.9
Oeu005823.1 Olea europaea HOM05D005329 ORTHO05D006858 1.1e-11 72.4 41 80.5
PSO210G1941 Papaver somniferum HOM05D005329 ORTHO05D006858 1.1e-11 72.4 48 77.1
CSS0025552 Camellia sinensis var. sinensis HOM05D005329 ORTHO05D006858 1.5e-11 72.0 48 75.0
CSS0046286 Camellia sinensis var. sinensis HOM05D005329 ORTHO05D006858 1.5e-11 72.0 48 75.0
Duzib133G0265 Durio zibethinus HOM05D005329 ORTHO05D006858 1.5e-11 72.0 41 80.5
Lalb_Chr20g0117361 Lupinus albus HOM05D005329 ORTHO05D006858 1.5e-11 72.0 48 72.9
Pp3c6_11200 Physcomitrium patens HOM05D005329 ORTHO05D006858 1.5e-11 72.0 49 71.4
Prupe.2G138300 Prunus persica HOM05D005329 ORTHO05D006858 1.5e-11 72.0 48 77.1
Aa31LG10G14910 Aethionema arabicum HOM05D005329 ORTHO05D006858 1.9e-11 71.6 47 76.6
HanXRQChr06g0169081 Helianthus annuus HOM05D005329 ORTHO05D006858 1.9e-11 71.6 48 77.1
MD07G1115700 Malus domestica HOM05D005329 ORTHO05D006858 1.9e-11 71.6 40 85.0
vmacro13440 Vaccinium macrocarpon HOM05D005329 ORTHO05D006858 1.9e-11 71.6 41 80.5
Zm00001eb208740 Zea mays HOM05D005329 ORTHO05D006858 1.9e-11 71.6 41 82.9
Zm00001eb230950 Zea mays HOM05D005329 ORTHO05D006858 1.9e-11 71.6 41 82.9
Ca_15027_v3 Cicer arietinum L. HOM05D005329 ORTHO05D006858 2.5e-11 71.2 48 75.0
Lj7A535G33 Lonicera japonica HOM05D005329 ORTHO05D006858 2.5e-11 71.2 48 75.0
Psat5g150560 Pisum sativum HOM05D005329 ORTHO05D006858 2.5e-11 71.2 48 75.0
PGR142G4306 Punica granatum HOM05D005329 ORTHO05D006858 2.5e-11 71.2 48 75.0
Rhsim07G0031000 Rhododendron simsii HOM05D005329 ORTHO05D006858 2.5e-11 71.2 48 75.0
GSVIVG01027681001 Vitis vinifera HOM05D005329 ORTHO05D006858 2.5e-11 71.2 48 75.0
CBR_g46453 Chara braunii HOM05D005329 ORTHO05D006858 3.3e-11 70.9 41 80.5
Eucgr.E01511 Eucalyptus grandis HOM05D005329 ORTHO05D006858 3.3e-11 70.9 48 75.0
Medtr3g466380 Medicago truncatula HOM05D005329 ORTHO05D006858 3.3e-11 70.9 48 72.9
TPR.G24981 Trifolium pratense HOM05D005329 ORTHO05D006858 3.3e-11 70.9 40 82.5
CBR_g3184 Chara braunii HOM05D005329 ORTHO05D006858 4.3e-11 70.5 40 80.0
Cc02_g24400 Coffea canephora HOM05D005329 ORTHO05D006858 4.3e-11 70.5 48 75.0
Potri.014G060100 Populus trichocarpa HOM05D005329 ORTHO05D006858 4.3e-11 70.5 48 75.0
ATR0807G181 Amborella trichopoda HOM05D005329 ORTHO05D006858 5.6e-11 70.1 40 80.0
EL10Ac4g07683 Beta vulgaris HOM05D005329 ORTHO05D006858 5.6e-11 70.1 40 80.0
AUR62034758 Chenopodium quinoa HOM05D005329 ORTHO05D006858 5.6e-11 70.1 40 82.5
Sabra14G0044000 Salix brachista HOM05D005329 ORTHO05D006858 5.6e-11 70.1 48 72.9
Sed0016036 Sechium edule HOM05D005329 ORTHO05D006858 5.6e-11 70.1 48 70.8
Actinidia12186 Actinidia chinensis HOM05D005329 ORTHO05D006858 7.3e-11 69.7 48 70.8
AagrBONN_evm.TU.Sc2ySwM_228.5763 Anthoceros agrestis HOM05D005329 ORTHO05D006858 7.3e-11 69.7 49 69.4
Hund22462 Selenicereus undatus HOM05D005329 ORTHO05D006858 7.3e-11 69.7 40 82.5
SEGI_35106 Sequoiadendron giganteum HOM05D005329 ORTHO05D006858 7.3e-11 69.7 49 69.4
CDE04G3112 Ceratophyllum demersum HOM05D005329 ORTHO05D006858 9.6e-11 69.3 40 77.5
unitig_8.g3829 Utricularia gibba HOM05D005329 ORTHO05D006858 9.6e-11 69.3 40 77.5
A03p25050 Brassica napus HOM05D005329 ORTHO05D006858 1.3e-10 68.9 50 72.0
BraA03t11707Z Brassica rapa HOM05D005329 ORTHO05D006858 1.3e-10 68.9 50 72.0
ClCG06G003040 Citrullus lanatus HOM05D005329 ORTHO05D006858 1.3e-10 68.9 48 68.8
MELO3C021145.2 Cucumis melo HOM05D005329 ORTHO05D006858 1.3e-10 68.9 48 68.8
CsaV3_6G009150 Cucumis sativus L. HOM05D005329 ORTHO05D006858 1.3e-10 68.9 48 68.8
HanXRQChr04g0123141 Helianthus annuus HOM05D005329 ORTHO05D006858 1.3e-10 68.9 39 82.1
Mapoly0037s0028 Marchantia polymorpha HOM05D005329 ORTHO05D006858 1.3e-10 68.9 49 67.3
Sc24g0004030 Simmondsia chinensis HOM05D005329 ORTHO05D006858 1.3e-10 68.9 40 77.5
HPP92_022438 Vanilla planifolia HOM05D005329 ORTHO05D006858 1.3e-10 68.9 40 80.0
Glyma.18G055100 Glycine max HOM05D005329 ORTHO05D006858 1.6e-10 68.6 48 68.8
SMO118G0360 Selaginella moellendorffii HOM05D005329 ORTHO05D006858 2.1e-10 68.2 49 69.4
Glyma.11G161400 Glycine max HOM05D005329 ORTHO05D006858 3.6e-10 67.4 40 75.0
VMungo0540G2212 Vigna mungo HOM05D005329 ORTHO05D006858 4.8e-10 67.0 48 70.8
Phvul.006G076100 Phaseolus vulgaris HOM05D005329 ORTHO05D006858 1.8e-09 65.1 48 64.6
MBI04_g41909_MAGBIO Magnolia biondii HOM05D005329 ORTHO05D006858 9.0e-09 62.8 47 68.1
Gohir.A07G146900 Gossypium hirsutum HOM05D005329 ORTHO05D006858 1.2e-08 62.4 36 80.6
ECA236G1715 Erigeron canadensis HOM05D005329 ORTHO05D006858 2.2e-07 58.2 30 93.3
Cre12.g489050 Chlamydomonas reinhardtii HOM05D005329 ORTHO05D006858 1.4e-06 55.5 38 60.5
PRCOL_00006057 Prasinoderma coloniale HOM05D005329 ORTHO05D006858 7.1e-06 53.1 37 62.2


User provided reference genes

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