Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A04p00480 Brassica napus HOM05D007613 ORTHO05D009344 2.0e-89 332.4 165 100.0
BraA04t15767Z Brassica rapa HOM05D007613 ORTHO05D009344 1.0e-58 230.3 126 92.1
BcaB02g08092 Brassica carinata HOM05D007613 ORTHO05D009344 2.4e-55 219.2 126 85.7
C04p30380 Brassica napus HOM05D007613 ORTHO05D009344 1.0e-53 213.8 122 89.3
BolC4t24569H Brassica oleracea HOM05D007613 ORTHO05D009344 1.0e-53 213.8 122 89.3
Sp5g00640 Schrenkiella parvula HOM05D007613 ORTHO05D009344 3.7e-48 195.3 110 85.5
Thhalv10006304m.g Eutrema salsugineum HOM05D007613 ORTHO05D009344 8.3e-48 194.1 112 82.1
AL5G45650 Arabidopsis lyrata HOM05D007613 ORTHO05D009344 1.1e-44 183.7 110 80.0
CARHR173140 Cardamine hirsuta HOM05D007613 ORTHO05D009344 2.5e-44 182.6 109 78.9
AT3G62880 Arabidopsis thaliana HOM05D007613 ORTHO05D009344 6.2e-43 177.9 106 79.2
Aa31LG10G16510 Aethionema arabicum HOM05D007613 ORTHO05D009344 1.1e-42 177.2 106 77.4
THA.LOC104798831 Tarenaya hassleriana HOM05D007613 ORTHO05D009344 1.0e-37 160.6 106 68.9
BcaC02g10319 Brassica carinata HOM05D007613 ORTHO05D009344 3.0e-37 159.1 82 97.6
CiPaw.07G109200 Carya illinoinensis HOM05D007613 ORTHO05D009344 4.4e-33 145.2 105 61.9
Eucgr.H01109 Eucalyptus grandis HOM05D007613 ORTHO05D009344 7.6e-33 144.4 106 62.3
MELO3C016000.2 Cucumis melo HOM05D007613 ORTHO05D009344 2.9e-32 142.5 105 61.9
Ciclev10022836m.g Citrus clementina HOM05D007613 ORTHO05D009344 4.9e-32 141.7 109 59.6
Potri.014G128900 Populus trichocarpa HOM05D007613 ORTHO05D009344 4.9e-32 141.7 105 62.9
Manes.01G219200 Manihot esculenta HOM05D007613 ORTHO05D009344 6.4e-32 141.4 105 61.9
vmacro15014 Vaccinium macrocarpon HOM05D007613 ORTHO05D009344 1.4e-31 140.2 114 57.9
Duzib133G0913 Durio zibethinus HOM05D007613 ORTHO05D009344 1.9e-31 139.8 106 60.4
CsaV3_7G029280 Cucumis sativus L. HOM05D007613 ORTHO05D009344 3.2e-31 139.0 105 59.0
PGR119G2478 Punica granatum HOM05D007613 ORTHO05D009344 1.6e-30 136.7 106 59.4
Cpa.g.sc9.260 Carica papaya HOM05D000286 ORTHO05D000170 2.1e-30 136.3 92 66.3
VMungo0720G1265 Vigna mungo HOM05D007613 ORTHO05D009344 2.1e-30 136.3 105 55.2
Atru.chr5.1146 Acer truncatum HOM05D007613 ORTHO05D009344 3.5e-30 135.6 104 61.5
Actinidia24821 Actinidia chinensis HOM05D007613 ORTHO05D009344 3.5e-30 135.6 106 55.7
QL12p028448 Quercus lobata HOM05D007613 ORTHO05D009344 4.6e-30 135.2 105 58.1
Phvul.007G146700 Phaseolus vulgaris HOM05D007613 ORTHO05D009344 1.7e-29 133.3 105 54.3
Thecc.01G300700 Theobroma cacao HOM05D007613 ORTHO05D009344 1.1e-28 130.6 84 65.5
Prupe.8G261600 Prunus persica HOM05D007613 ORTHO05D009344 1.5e-28 130.2 108 57.4
MD03G1288400 Malus domestica HOM05D007613 ORTHO05D009344 2.5e-28 129.4 107 57.9
Gorai.008G145100 Gossypium raimondii HOM05D007613 ORTHO05D009344 3.3e-28 129.0 101 58.4
Gohir.D12G134100 Gossypium hirsutum HOM05D007613 ORTHO05D009344 9.6e-28 127.5 101 58.4
TAR636G2501 Trochodendron aralioides HOM05D007613 ORTHO05D009344 9.6e-28 127.5 105 52.4
Psat6g165400 Pisum sativum HOM05D007613 ORTHO05D009344 1.3e-27 127.1 105 52.4
ECA248G1192 Erigeron canadensis HOM05D007613 ORTHO05D009344 4.8e-27 125.2 107 52.3
TPR.G33996 Trifolium pratense HOM05D007613 ORTHO05D009344 1.1e-26 124.0 105 52.4
arahy.Tifrunner.gnm1.ann1.BW40YJ Arachis hypogaea HOM05D007613 ORTHO05D009344 1.8e-26 123.2 105 50.5
HanXRQChr13g0413041 Helianthus annuus HOM05D007613 ORTHO05D009344 4.0e-26 122.1 108 49.1
Medtr1g088460 Medicago truncatula HOM05D007613 ORTHO05D009344 6.9e-26 121.3 105 52.4
arahy.Tifrunner.gnm1.ann1.7MAL8N Arachis hypogaea HOM05D007613 ORTHO05D009344 9.0e-26 120.9 105 49.5
Lsat_1_v5_gn_5_191040 Lactuca sativa HOM05D007613 ORTHO05D009344 1.5e-25 120.2 107 48.6
GSVIVG01028017001 Vitis vinifera HOM05D007613 ORTHO05D009344 2.6e-25 119.4 101 53.5
Lalb_Chr06g0166471 Lupinus albus HOM05D007613 ORTHO05D009344 3.4e-25 119.0 107 46.7
DCAR_018332 Daucus carota HOM05D007613 ORTHO05D009344 4.5e-25 118.6 107 52.3
RcHm_v2.0_Chr6g0294031 Rosa chinensis HOM05D007613 ORTHO05D009344 7.6e-25 117.9 107 47.7
Solyc06g084550.3 Solanum lycopersicum HOM05D007613 ORTHO05D009344 7.6e-25 117.9 104 51.0
Sopen06g035930 Solanum pennellii HOM05D007613 ORTHO05D009344 1.7e-24 116.7 104 51.0
Glyma.10G018300 Glycine max HOM05D007613 ORTHO05D009344 2.2e-24 116.3 107 49.5
Nitab4.5_0002820g0060 Nicotiana tabacum HOM05D007613 ORTHO05D009344 2.2e-24 116.3 104 51.0
Nitab4.5_0019054g0010 Nicotiana tabacum HOM05D007613 ORTHO05D009344 2.2e-24 116.3 104 51.0
Lj5g0017580 Lotus japonicus HOM05D007613 ORTHO05D009344 3.8e-24 115.5 107 48.6
CDE08G0198 Ceratophyllum demersum HOM05D007613 ORTHO05D009344 4.9e-24 115.2 103 49.5
Peaxi162Scf00140g01222 Petunia axillaris HOM05D007613 ORTHO05D009344 4.9e-24 115.2 104 51.0
MSTRG.18147 Avicennia marina HOM05D007613 ORTHO05D009344 1.1e-23 114.0 105 50.5
Migut.B01150 Erythranthe guttata HOM05D007613 ORTHO05D009344 1.1e-23 114.0 105 49.5
Migut.D00222 Erythranthe guttata HOM05D007613 ORTHO05D009344 1.1e-23 114.0 105 49.5
EL10Ac7g17473 Beta vulgaris HOM05D007613 ORTHO05D009344 1.9e-23 113.2 105 54.3
TWI59G0030 Tripterygium wilfordii HOM05D007613 ORTHO05D009344 2.4e-23 112.8 101 54.5
Ca_10334_v3 Cicer arietinum L. HOM05D007613 ORTHO05D009344 3.2e-23 112.5 105 49.5
PSO170G2016 Papaver somniferum HOM05D007613 ORTHO05D009344 5.4e-23 111.7 105 50.5
Lalb_Chr02g0146351 Lupinus albus HOM05D007613 ORTHO05D009344 1.2e-22 110.5 105 44.8
CAN.G1209.25 Capsicum annuum HOM05D007613 ORTHO05D009344 1.0e-21 107.5 104 48.1
Oeu048336.2 Olea europaea HOM05D007613 ORTHO05D009344 1.3e-21 107.1 105 47.6
Hma1.2p1_0491F.1_g164570 Hydrangea macrophylla HOM05D007613 ORTHO05D009344 5.1e-21 105.1 97 49.5
Ah.08g213430 Amaranthus hybridus HOM05D000286 ORTHO05D000170 6.7e-21 104.8 95 52.6
COL.COLO4_23344 Corchorus olitorius HOM05D007613 ORTHO05D009344 1.1e-20 104.0 68 63.2
Sed0015913 Sechium edule HOM05D007613 ORTHO05D009344 3.3e-20 102.4 73 61.6
FvH4_2g25740 Fragaria vesca HOM05D007613 ORTHO05D009344 4.3e-20 102.1 107 41.1
Cc01_g20860 Coffea canephora HOM05D007613 ORTHO05D009344 9.6e-20 100.9 93 49.5
CSS0026666 Camellia sinensis var. sinensis HOM05D007613 ORTHO05D009344 2.6e-17 92.8 65 58.5
ClCG09G005860 Citrullus lanatus HOM05D007613 ORTHO05D009344 4.5e-17 92.0 113 46.9
Haze_04939 Corylus avellana HOM05D007613 ORTHO05D009344 3.8e-16 89.0 81 48.1
Carub.0005s2952 Capsella rubella HOM05D001675 ORTHO05D001808 1.9e-15 86.7 47 83.0
FAN20G1450 Fragaria x ananassa HOM05D007613 ORTHO05D009344 1.9e-15 86.7 124 33.9
Aqoxy2G02939 Aquilegia oxysepala HOM05D007613 ORTHO05D009344 5.5e-15 85.1 82 46.3
SGA_v2.0_scaffold1G00364 Striga asiatica HOM05D001636 ORTHO05D003817 5.5e-15 85.1 69 52.2
MD11G1309700 Malus domestica HOM05D007613 ORTHO05D009344 1.2e-14 84.0 65 61.5
Nn3g21498 Nelumbo nucifera HOM05D007613 ORTHO05D009344 1.2e-14 84.0 62 56.5
AUR62008666 Chenopodium quinoa HOM05D007613 ORTHO05D009344 1.3e-13 80.5 77 49.4
ATR0706G141 Amborella trichopoda HOM05D007613 ORTHO05D009344 2.3e-13 79.7 104 35.6
PGSC0003DMG400024046 Solanum tuberosum HOM05D007613 ORTHO05D009344 1.1e-12 77.4 124 34.7
Rhsim01G0285300 Rhododendron simsii HOM05D007613 ORTHO05D009344 4.3e-12 75.5 81 42.0
FAN27G2766 Fragaria x ananassa HOM05D007613 ORTHO05D009344 1.3e-11 73.9 64 45.3
Mapoly0048s0107 Marchantia polymorpha HOM05D007613 ORTHO05D009344 6.2e-11 71.6 95 37.9
Pp3c19_22480 Physcomitrium patens HOM05D007613 ORTHO05D009344 4.0e-10 68.9 116 37.1
SMO347G0100 Selaginella moellendorffii HOM05D007613 ORTHO05D009344 4.0e-10 68.9 76 43.4
HanXRQChr13g0413071 Helianthus annuus HOM05D007613 ORTHO05D009344 5.3e-10 68.6 57 47.4
Sabra14G0095700 Salix brachista HOM05D007613 ORTHO05D009344 9.0e-10 67.8 105 40.0
FAN24G3183 Fragaria x ananassa HOM05D007613 ORTHO05D009344 1.5e-09 67.0 68 39.7
Hund18170 Selenicereus undatus HOM05D007613 ORTHO05D009344 5.8e-09 65.1 68 41.2
FAN15G1907 Fragaria x ananassa HOM05D007613 ORTHO05D009344 7.6e-09 64.7 100 31.0
SEGI_00670 Sequoiadendron giganteum HOM05D002174 ORTHO05D005941 1.3e-08 63.9 113 36.3
Os01g0303300 Oryza sativa ssp. japonica HOM05D002174 ORTHO05D005447 8.4e-08 61.2 123 39.0
Lalb_Chr07g0182101 Lupinus albus HOM05D002174 ORTHO05D005447 1.2e-06 57.4 112 32.1
Medtr4g121900 Medicago truncatula HOM05D002174 ORTHO05D005447 1.2e-06 57.4 91 35.2
Cfa005911 Carpinus fangiana HOM05D007613 ORTHO05D009344 1.6e-06 57.0 44 65.9
SMO358G0166 Selaginella moellendorffii HOM05D002174 ORTHO05D005941 2.1e-06 56.6 58 43.1
Lalb_Chr13g0298411 Lupinus albus HOM05D002174 ORTHO05D005447 4.6e-06 55.5 79 39.2
HPP92_001148 Vanilla planifolia HOM05D002174 ORTHO05D005447 4.6e-06 55.5 79 38.0
HPP92_001059 Vanilla planifolia HOM05D002174 ORTHO05D005447 6.0e-06 55.1 79 38.0
Actinidia21047 Actinidia chinensis HOM05D007613 ORTHO05D009344 7.9e-06 54.7 39 56.4
Mapoly0133s0032 Marchantia polymorpha HOM05D002174 ORTHO05D005941 7.9e-06 54.7 67 38.8


User provided reference genes

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