Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p68390 Brassica napus HOM05D016987 ORTHO05D010763 1.1e-173 613.2 316 100.0
BraSC36t46107Z Brassica rapa HOM05D016987 ORTHO05D010763 7.7e-167 590.5 320 96.6
BraA01t02618Z Brassica rapa HOM05D016987 ORTHO05D010763 7.2e-165 583.9 320 95.3
BNapus_Darmor_BZH_scaffold_103p00090 Brassica napus HOM05D016987 ORTHO05D010763 1.0e-163 580.1 320 95.6
BNapus_Darmor_BZH_scaffold_104p00100 Brassica napus HOM05D016987 ORTHO05D010763 1.0e-163 580.1 320 95.6
BolC9t56412H Brassica oleracea HOM05D001038 ORTHO05D000395 1.3e-36 157.9 257 45.9
C03p52030 Brassica napus HOM05D001038 ORTHO05D000395 2.9e-33 146.7 78 91.0
BolC3t17485H Brassica oleracea HOM05D001038 ORTHO05D000395 2.9e-33 146.7 78 91.0
BcaB08g34565 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-29 134.8 597 24.5
C09p35780 Brassica napus HOM05D001038 ORTHO05D000395 2.0e-29 134.0 258 42.2
BcaB03g16578 Brassica carinata HOM05D001038 ORTHO05D000395 8.2e-28 128.6 456 28.7
C05p37200 Brassica napus HOM05D001038 ORTHO05D017560 1.5e-24 117.9 445 27.0
BcaB04g18537 Brassica carinata HOM05D001038 ORTHO05D000395 1.2e-23 114.8 492 27.6
BcaB01g01915 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-22 111.3 518 26.4
BcaC08g47005 Brassica carinata HOM05D001038 ORTHO05D000395 4.0e-22 109.8 498 26.9
BcaB02g10939 Brassica carinata HOM05D001038 ORTHO05D000395 2.6e-21 107.1 289 36.0
C05p36210 Brassica napus HOM05D001038 ORTHO05D017560 5.7e-21 105.9 164 43.3
BcaB07g30174 Brassica carinata HOM05D001038 ORTHO05D000395 2.4e-19 100.5 555 25.4
BcaB08g35416 Brassica carinata HOM05D001038 ORTHO05D017560 4.1e-19 99.8 73 65.8
BcaC05g27732 Brassica carinata HOM05D016987 ORTHO05D017560 5.0e-17 92.8 164 40.9
BcaC05g27633 Brassica carinata HOM05D016987 ORTHO05D017560 1.2e-15 88.2 243 31.7
BcaB03g16260 Brassica carinata HOM05D001038 ORTHO05D019962 1.6e-15 87.8 73 60.3
BcaB05g25087 Brassica carinata HOM05D001038 ORTHO05D000395 3.6e-15 86.7 78 55.1
BraA06t25412Z Brassica rapa HOM05D001038 ORTHO05D017560 3.6e-15 86.7 73 56.2
BcaB06g26982 Brassica carinata HOM05D001038 ORTHO05D000395 1.0e-14 85.1 78 53.8
A01p23200 Brassica napus HOM05D001038 ORTHO05D000395 1.0e-14 85.1 269 34.2
C02p52080 Brassica napus HOM05D001038 ORTHO05D019962 1.4e-14 84.7 63 61.9
BolC2t11293H Brassica oleracea HOM05D001038 ORTHO05D019962 1.4e-14 84.7 63 61.9
BcaC09g49024 Brassica carinata HOM05D001038 ORTHO05D000395 3.0e-14 83.6 60 61.7
BcaC04g23074 Brassica carinata HOM05D001038 ORTHO05D019962 6.8e-14 82.4 250 30.4
C02p45450 Brassica napus HOM05D001038 ORTHO05D017560 1.5e-13 81.3 58 63.8
BolC6t38916H Brassica oleracea HOM05D001038 ORTHO05D010763 9.8e-13 78.6 63 58.7
BolC7t41684H Brassica oleracea HOM05D001038 ORTHO05D010763 1.7e-12 77.8 65 56.9
A09p34780 Brassica napus HOM05D001038 ORTHO05D000395 2.2e-12 77.4 297 28.3
C08p05930 Brassica napus HOM05D001038 ORTHO05D010763 2.8e-12 77.0 63 58.7
C09p26140 Brassica napus HOM05D001038 ORTHO05D010763 2.8e-12 77.0 63 58.7
C09p45390 Brassica napus HOM05D001038 ORTHO05D024072 2.8e-12 77.0 244 33.2
BcaC07g36920 Brassica carinata HOM05D001038 ORTHO05D000395 3.7e-12 76.6 267 29.6
C07p12170 Brassica napus HOM05D001038 ORTHO05D010763 3.7e-12 76.6 65 55.4
A01p01820 Brassica napus HOM05D001038 ORTHO05D000395 4.9e-12 76.3 191 31.9
BcaB06g26021 Brassica carinata HOM05D001038 ORTHO05D000395 8.3e-12 75.5 449 23.4
C07p12200 Brassica napus HOM05D001038 ORTHO05D010763 8.3e-12 75.5 65 55.4
BcaC08g46980 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-11 75.1 60 60.0
BcaC01g02304 Brassica carinata HOM05D001038 ORTHO05D000395 5.4e-11 72.8 285 28.8
BcaC03g17929 Brassica carinata HOM05D001038 ORTHO05D000395 5.4e-11 72.8 293 28.0
BcaC04g21093 Brassica carinata HOM05D001038 ORTHO05D000395 5.4e-11 72.8 70 60.0
C07p18290 Brassica napus HOM05D001038 ORTHO05D010763 5.4e-11 72.8 82 51.2
A09p28390 Brassica napus HOM05D001038 ORTHO05D000395 9.1e-11 72.0 367 26.7
BolC2t11143H Brassica oleracea HOM05D001038 ORTHO05D024385 9.1e-11 72.0 65 52.3
BolC7t41410H Brassica oleracea HOM05D001038 ORTHO05D010763 9.1e-11 72.0 61 57.4
BcaB01g00119 Brassica carinata HOM05D001038 ORTHO05D000395 1.2e-10 71.6 320 25.3
BolC7t41688H Brassica oleracea HOM05D001038 ORTHO05D000395 1.2e-10 71.6 66 54.5
BolC9t58082H Brassica oleracea HOM05D001038 ORTHO05D000395 2.7e-10 70.5 247 31.6
BcaB01g01303 Brassica carinata HOM05D001038 ORTHO05D000395 3.5e-10 70.1 254 30.3
BcaC05g26744 Brassica carinata HOM05D001038 ORTHO05D000395 5.9e-10 69.3 290 28.3
C07p09720 Brassica napus HOM05D001038 ORTHO05D010763 5.9e-10 69.3 61 57.4
C09p42070 Brassica napus HOM05D001038 ORTHO05D021947 1.0e-09 68.6 285 29.5
BcaB06g28131 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-09 68.2 295 30.5
BolC4t27749H Brassica oleracea HOM05D001038 ORTHO05D016776 2.3e-09 67.4 55 54.5
BcaB04g17766 Brassica carinata HOM05D001038 ORTHO05D000395 3.8e-09 66.6 295 30.8
BcaB02g11159 Brassica carinata HOM05D001038 ORTHO05D000395 8.6e-09 65.5 260 28.5
BcaC04g20563 Brassica carinata HOM05D001038 ORTHO05D021947 8.6e-09 65.5 285 29.1
BcaC04g20742 Brassica carinata HOM05D001038 ORTHO05D010763 8.6e-09 65.5 327 28.1
BraSC37t46126Z Brassica rapa HOM05D001038 ORTHO05D016776 8.6e-09 65.5 55 52.7
BcaNung00229 Brassica carinata HOM05D001038 ORTHO05D000395 1.5e-08 64.7 293 31.4
C07p15560 Brassica napus HOM05D001038 ORTHO05D000395 1.5e-08 64.7 253 27.3
BolC7t42043H Brassica oleracea HOM05D001038 ORTHO05D000395 1.9e-08 64.3 254 27.6
C07p21850 Brassica napus HOM05D001038 ORTHO05D019929 2.5e-08 63.9 59 50.8
C01p11550 Brassica napus HOM05D001038 ORTHO05D040626 3.3e-08 63.5 222 28.4
BcaB08g34782 Brassica carinata HOM05D001038 ORTHO05D000395 4.2e-08 63.2 304 25.3
BcaC04g19622 Brassica carinata HOM05D001038 ORTHO05D000395 4.2e-08 63.2 70 51.4
A01p24490 Brassica napus HOM05D001038 ORTHO05D021947 4.2e-08 63.2 293 28.0
A10p08770 Brassica napus HOM05D001038 ORTHO05D016776 4.2e-08 63.2 55 50.9
C02p45440 Brassica napus HOM05D001038 ORTHO05D000395 4.2e-08 63.2 76 48.7
C09p52160 Brassica napus HOM05D001038 ORTHO05D000395 4.2e-08 63.2 70 51.4
BcaB01g00832 Brassica carinata HOM05D001038 ORTHO05D000395 5.6e-08 62.8 60 50.0
BcaB03g16620 Brassica carinata HOM05D001038 ORTHO05D000395 5.6e-08 62.8 59 49.2
BcaB06g28161 Brassica carinata HOM05D001038 ORTHO05D000395 5.6e-08 62.8 301 28.9
A02p12560 Brassica napus HOM05D001038 ORTHO05D019929 5.6e-08 62.8 59 52.5
BolC5t32344H Brassica oleracea HOM05D001038 ORTHO05D017560 5.6e-08 62.8 70 51.4
BolC9t58942H Brassica oleracea HOM05D001038 ORTHO05D010763 5.6e-08 62.8 58 51.7
Thhalv10003408m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 7.2e-08 62.4 55 52.7
Thhalv10023964m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 7.2e-08 62.4 55 52.7
BcaC06g35484 Brassica carinata HOM05D001038 ORTHO05D000395 9.5e-08 62.0 254 27.2
BraA04t16494Z Brassica rapa HOM05D001038 ORTHO05D021947 9.5e-08 62.0 287 27.5
C06p10570 Brassica napus HOM05D001038 ORTHO05D014932 1.2e-07 61.6 305 24.6
BcaB06g27965 Brassica carinata HOM05D001038 ORTHO05D000395 1.6e-07 61.2 59 49.2
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 1.6e-07 61.2 58 53.4
BraA09t36747Z Brassica rapa HOM05D001038 ORTHO05D000395 1.6e-07 61.2 191 27.7
BcaB02g10843 Brassica carinata HOM05D001038 ORTHO05D000395 2.1e-07 60.8 293 28.0
C05p48930 Brassica napus HOM05D001038 ORTHO05D016716 3.6e-07 60.1 55 47.3
BolC5t33633H Brassica oleracea HOM05D001038 ORTHO05D016716 3.6e-07 60.1 55 47.3
BcaB06g26720 Brassica carinata HOM05D001038 ORTHO05D000395 4.7e-07 59.7 59 47.5
A05p28250 Brassica napus HOM05D001038 ORTHO05D019929 4.7e-07 59.7 59 49.2
BraA05t21706Z Brassica rapa HOM05D001038 ORTHO05D019929 4.7e-07 59.7 59 49.2
BcaC06g34914 Brassica carinata HOM05D001038 ORTHO05D019929 6.1e-07 59.3 59 49.2
BcaC07g37762 Brassica carinata HOM05D001038 ORTHO05D000395 6.1e-07 59.3 59 49.2
A04p22180 Brassica napus HOM05D001038 ORTHO05D000395 6.1e-07 59.3 58 50.0
BolC7t42716H Brassica oleracea HOM05D001038 ORTHO05D019929 6.1e-07 59.3 59 49.2
BolC8t48147H Brassica oleracea HOM05D001038 ORTHO05D000395 6.1e-07 59.3 59 49.2
BcaB03g16061 Brassica carinata HOM05D001038 ORTHO05D000395 8.0e-07 58.9 293 28.0
BcaC05g25823 Brassica carinata HOM05D001038 ORTHO05D014932 1.0e-06 58.5 60 48.3
BolC7t40492H Brassica oleracea HOM05D001038 ORTHO05D010763 1.0e-06 58.5 58 48.3
BolC7t41626H Brassica oleracea HOM05D001038 ORTHO05D014932 1.0e-06 58.5 60 48.3
BraA09t41072Z Brassica rapa HOM05D001038 ORTHO05D000395 1.0e-06 58.5 81 42.0
BcaB02g06555 Brassica carinata HOM05D001038 ORTHO05D010763 1.4e-06 58.2 55 45.5
Thhalv10002975m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 1.4e-06 58.2 55 50.9
BcaB01g01205 Brassica carinata HOM05D001038 ORTHO05D000395 1.8e-06 57.8 60 50.0
BraA05t19810Z Brassica rapa HOM05D001038 ORTHO05D016703 1.8e-06 57.8 55 45.5
BolC9t57409H Brassica oleracea HOM05D001038 ORTHO05D024072 2.3e-06 57.4 151 33.1
BraA04t17267Z Brassica rapa HOM05D001038 ORTHO05D014932 2.3e-06 57.4 60 45.0
BcaB06g25472 Brassica carinata HOM05D001038 ORTHO05D010763 3.0e-06 57.0 61 41.0
BcaC03g15415 Brassica carinata HOM05D001038 ORTHO05D000395 3.0e-06 57.0 206 27.7
BolC5t32403H Brassica oleracea HOM05D001038 ORTHO05D016716 3.0e-06 57.0 55 45.5
BolC9t55839H Brassica oleracea HOM05D001038 ORTHO05D016703 3.0e-06 57.0 58 44.8
BraA02t08689Z Brassica rapa HOM05D001038 ORTHO05D010763 4.0e-06 56.6 59 45.8
BraA07t28383Z Brassica rapa HOM05D001038 ORTHO05D032078 4.0e-06 56.6 284 27.1
BraA07t28779Z Brassica rapa HOM05D001038 ORTHO05D000395 4.0e-06 56.6 159 29.6
BcaB04g19444 Brassica carinata HOM05D001038 ORTHO05D010763 5.2e-06 56.2 55 41.8
BolC6t36138H Brassica oleracea HOM05D001038 ORTHO05D014932 5.2e-06 56.2 60 46.7
BolC7t41164H Brassica oleracea HOM05D001038 ORTHO05D000395 5.2e-06 56.2 58 48.3
C04p58380 Brassica napus HOM05D001038 ORTHO05D010763 6.8e-06 55.8 55 45.5
C09p60390 Brassica napus HOM05D001038 ORTHO05D016703 6.8e-06 55.8 58 44.8
BcaB01g01614 Brassica carinata HOM05D001038 ORTHO05D014932 8.9e-06 55.5 297 27.6
BcaB04g17277 Brassica carinata HOM05D001038 ORTHO05D014932 8.9e-06 55.5 60 43.3
BcaNung04782 Brassica carinata HOM05D001038 ORTHO05D014932 8.9e-06 55.5 60 43.3
BolC9t56621H Brassica oleracea HOM05D001038 ORTHO05D000395 8.9e-06 55.5 58 48.3


User provided reference genes

Program Settings