Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p67500 Brassica napus HOM05D006957 ORTHO05D008647 1.0e-165 586.6 295 100.0
BraA01t02718Z Brassica rapa HOM05D006957 ORTHO05D008647 3.0e-165 585.1 295 99.7
BcaC02g10501 Brassica carinata HOM05D006957 ORTHO05D008647 2.4e-122 442.6 259 86.9
C04p28180 Brassica napus HOM05D006957 ORTHO05D008647 2.4e-122 442.6 259 86.9
BolC4t24361H Brassica oleracea HOM05D006957 ORTHO05D008647 2.4e-122 442.6 259 86.9
BcaC06g31885 Brassica carinata HOM05D006957 ORTHO05D008647 3.3e-119 432.2 259 86.1
BolC4t24891H Brassica oleracea HOM05D006957 ORTHO05D008647 3.6e-118 428.7 259 85.7
Sp2g02390 Schrenkiella parvula HOM05D006957 ORTHO05D008647 1.0e-109 400.6 260 80.4
Thhalv10023639m.g Eutrema salsugineum HOM05D006957 ORTHO05D008647 1.2e-105 387.1 262 78.2
AL2G13680 Arabidopsis lyrata HOM05D006957 ORTHO05D008647 2.0e-105 386.3 262 79.0
AT1G62250 Arabidopsis thaliana HOM05D006957 ORTHO05D008647 8.6e-104 380.9 262 77.9
Carub.0002s0276 Capsella rubella HOM05D006957 ORTHO05D008647 3.3e-103 379.0 259 77.2
BcaC02g10063 Brassica carinata HOM05D006957 ORTHO05D008647 2.0e-100 369.8 259 76.4
C04p33270 Brassica napus HOM05D006957 ORTHO05D008647 3.2e-90 335.9 209 82.3
THA.LOC104818712 Tarenaya hassleriana HOM05D006957 ORTHO05D008647 6.4e-83 311.6 262 67.6
Atru.chr10.2253 Acer truncatum HOM05D006957 ORTHO05D008647 2.0e-76 290.0 280 60.4
RcHm_v2.0_Chr5g0077361 Rosa chinensis HOM05D006957 ORTHO05D008647 8.4e-75 284.6 224 67.9
Thecc.06G223400 Theobroma cacao HOM05D006957 ORTHO05D008647 8.4e-75 284.6 203 73.4
CSS0002589 Camellia sinensis var. sinensis HOM05D006957 ORTHO05D008647 1.9e-74 283.5 262 60.3
COL.COLO4_31796 Corchorus olitorius HOM05D006957 ORTHO05D008647 5.4e-74 282.0 219 68.9
Dinv13912 Davidia involucrata HOM05D006957 ORTHO05D008647 5.4e-74 282.0 274 58.8
Duzib160G0853 Durio zibethinus HOM05D006957 ORTHO05D008647 7.1e-74 281.6 205 72.7
Gorai.010G181400 Gossypium raimondii HOM05D006957 ORTHO05D008647 1.2e-73 280.8 194 74.2
FvH4_3g43300 Fragaria vesca HOM05D006957 ORTHO05D008647 1.6e-73 280.4 272 59.9
Lj1A1232T100 Lonicera japonica HOM05D006957 ORTHO05D008647 1.6e-73 280.4 276 58.0
Prupe.6G022000 Prunus persica HOM05D006957 ORTHO05D008647 1.6e-73 280.4 272 59.6
MSTRG.7198 Avicennia marina HOM05D006957 ORTHO05D008647 2.1e-73 280.0 195 74.4
GSVIVG01012704001 Vitis vinifera HOM05D006957 ORTHO05D008647 2.7e-73 279.6 217 68.7
Migut.M01335 Erythranthe guttata HOM05D006957 ORTHO05D008647 4.6e-73 278.9 195 73.3
Gohir.A06G149100 Gossypium hirsutum HOM05D006957 ORTHO05D008647 4.6e-73 278.9 193 74.6
Manes.17G025800 Manihot esculenta HOM05D006957 ORTHO05D008647 6.0e-73 278.5 220 68.2
arahy.Tifrunner.gnm1.ann1.SK97UM Arachis hypogaea HOM05D006957 ORTHO05D008647 7.8e-73 278.1 268 59.3
arahy.Tifrunner.gnm1.ann1.VHEB9D Arachis hypogaea HOM05D006957 ORTHO05D008647 7.8e-73 278.1 268 59.3
QL05p072698 Quercus lobata HOM05D006957 ORTHO05D008647 7.8e-73 278.1 275 57.1
Gohir.D06G155200 Gossypium hirsutum HOM05D006957 ORTHO05D008647 1.0e-72 277.7 193 73.6
ClCG01G021850 Citrullus lanatus HOM05D006957 ORTHO05D008647 2.3e-72 276.6 274 58.0
CANSAT56G0113 Cannabis sativa HOM05D006957 ORTHO05D008647 3.0e-72 276.2 232 65.1
Peaxi162Scf00178g01715 Petunia axillaris HOM05D006957 ORTHO05D008647 3.9e-72 275.8 200 69.5
Cc09_g01500 Coffea canephora HOM05D006957 ORTHO05D008647 5.1e-72 275.4 245 60.8
Eucgr.L02772 Eucalyptus grandis HOM05D006957 ORTHO05D008647 5.1e-72 275.4 211 67.8
Rhsim02G0105900 Rhododendron simsii HOM05D006957 ORTHO05D008647 5.1e-72 275.4 274 56.2
TAR629G0592 Trochodendron aralioides HOM05D006957 ORTHO05D008647 5.1e-72 275.4 196 72.4
Sabra04G0005100 Salix brachista HOM05D006957 ORTHO05D008647 6.6e-72 275.0 182 75.3
MD11G1027900 Malus domestica HOM05D006957 ORTHO05D008647 8.7e-72 274.6 267 59.6
vmacro15796 Vaccinium macrocarpon HOM05D006957 ORTHO05D008647 8.7e-72 274.6 204 70.1
Cfa000203 Carpinus fangiana HOM05D006957 ORTHO05D008647 1.1e-71 274.2 209 68.4
Potri.011G006700 Populus trichocarpa HOM05D006957 ORTHO05D008647 1.1e-71 274.2 204 70.1
PGR042G2408 Punica granatum HOM05D006957 ORTHO05D008647 1.1e-71 274.2 221 65.2
Sed0022215 Sechium edule HOM05D006957 ORTHO05D008647 1.1e-71 274.2 267 58.1
Ciclev10016210m.g Citrus clementina HOM05D006957 ORTHO05D008647 1.9e-71 273.5 195 72.8
Glyma.07G262000 Glycine max HOM05D006957 ORTHO05D008647 1.9e-71 273.5 275 57.5
MELO3C007402.2 Cucumis melo HOM05D006957 ORTHO05D008647 3.3e-71 272.7 267 56.9
Psat4g006040 Pisum sativum HOM05D006957 ORTHO05D008647 3.3e-71 272.7 225 64.4
FAN16G3059 Fragaria x ananassa HOM05D006957 ORTHO05D008647 4.3e-71 272.3 280 57.9
FAN25G2833 Fragaria x ananassa HOM05D006957 ORTHO05D008647 4.3e-71 272.3 287 57.5
Glyma.17G012100 Glycine max HOM05D006957 ORTHO05D008647 4.3e-71 272.3 277 56.7
CAN.G1014.10 Capsicum annuum HOM05D006957 ORTHO05D008647 5.6e-71 271.9 180 75.0
Duzib192G0359 Durio zibethinus HOM05D006957 ORTHO05D008647 5.6e-71 271.9 189 73.0
FAN21G2957 Fragaria x ananassa HOM05D006957 ORTHO05D008647 7.3e-71 271.6 287 57.5
TWI38G1647 Tripterygium wilfordii HOM05D006957 ORTHO05D008647 7.3e-71 271.6 232 64.7
AUR62012727 Chenopodium quinoa HOM05D006957 ORTHO05D008647 9.6e-71 271.2 193 72.5
AUR62021927 Chenopodium quinoa HOM05D006957 ORTHO05D008647 9.6e-71 271.2 193 72.5
FAN11G3374 Fragaria x ananassa HOM05D006957 ORTHO05D008647 1.3e-70 270.8 287 57.1
Lj4g0000977 Lotus japonicus HOM05D006957 ORTHO05D008647 1.3e-70 270.8 182 74.2
PGSC0003DMG400016446 Solanum tuberosum HOM05D006957 ORTHO05D008647 1.3e-70 270.8 183 74.3
CsaV3_6G048910 Cucumis sativus L. HOM05D006957 ORTHO05D008647 2.1e-70 270.0 274 58.4
Lsat_1_v5_gn_4_59280 Lactuca sativa HOM05D006957 ORTHO05D008647 2.8e-70 269.6 270 58.1
SalBow8G2851 Salvia bowleyana HOM05D006957 ORTHO05D008647 3.6e-70 269.2 216 66.7
Solyc02g080780.3 Solanum lycopersicum HOM05D006957 ORTHO05D008647 4.8e-70 268.9 180 74.4
VMungo1215G0309 Vigna mungo HOM05D006957 ORTHO05D008647 4.8e-70 268.9 275 56.7
MBI18_g04903_MAGBIO Magnolia biondii HOM05D006957 ORTHO05D008647 6.2e-70 268.5 182 74.7
Sopen02g025470 Solanum pennellii HOM05D006957 ORTHO05D008647 6.2e-70 268.5 180 74.4
DCAR_028192 Daucus carota HOM05D006957 ORTHO05D008647 8.1e-70 268.1 283 55.5
EL10Ac8g20084 Beta vulgaris HOM05D006957 ORTHO05D008647 1.4e-69 267.3 193 69.9
Nitab4.5_0007963g0030 Nicotiana tabacum HOM05D006957 ORTHO05D008647 1.4e-69 267.3 232 62.9
Eucgr.E03906 Eucalyptus grandis HOM05D006957 ORTHO05D008647 3.1e-69 266.2 211 67.3
Lalb_Chr07g0177131 Lupinus albus HOM05D006957 ORTHO05D008647 3.1e-69 266.2 180 75.0
ATR0794G153 Amborella trichopoda HOM05D006957 ORTHO05D008647 4.0e-69 265.8 266 55.3
Aqoxy4G01856 Aquilegia oxysepala HOM05D006957 ORTHO05D008647 4.0e-69 265.8 211 65.9
HanXRQChr16g0515501 Helianthus annuus HOM05D006957 ORTHO05D008647 6.9e-69 265.0 270 57.4
QL02p099916 Quercus lobata HOM05D006957 ORTHO05D008647 1.2e-68 264.2 178 74.2
ECA234G3681 Erigeron canadensis HOM05D006957 ORTHO05D008647 1.5e-68 263.8 203 67.0
SGA_v2.0_scaffold4G01906 Striga asiatica HOM05D006957 ORTHO05D008647 2.0e-68 263.5 196 69.4
TPR.G29296 Trifolium pratense HOM05D006957 ORTHO05D008647 2.0e-68 263.5 225 62.2
Nitab4.5_0002695g0060 Nicotiana tabacum HOM05D006957 ORTHO05D008647 3.4e-68 262.7 252 57.9
PSO832G3220 Papaver somniferum HOM05D006957 ORTHO05D008647 4.5e-68 262.3 183 72.1
Haze_06820 Corylus avellana HOM05D006957 ORTHO05D008647 5.8e-68 261.9 296 54.4
Ca_21073_v3 Cicer arietinum L. HOM05D006957 ORTHO05D008647 7.6e-68 261.5 182 70.9
Medtr4g132350 Medicago truncatula HOM05D006957 ORTHO05D008647 7.6e-68 261.5 265 55.1
Phvul.003G080300 Phaseolus vulgaris HOM05D006957 ORTHO05D008647 1.1e-66 257.7 275 55.6
Ah.09g234750 Amaranthus hybridus HOM05D006957 ORTHO05D008647 1.4e-66 257.3 183 68.9
Os03g0744700 Oryza sativa ssp. japonica HOM05D006957 ORTHO05D008647 2.7e-65 253.1 182 70.3
Hund21421 Selenicereus undatus HOM05D006957 ORTHO05D008647 7.9e-65 251.5 278 54.7
unitig_748.g7953 Utricularia gibba HOM05D006957 ORTHO05D008647 7.9e-65 251.5 202 63.9
Actinidia11860 Actinidia chinensis HOM05D006957 ORTHO05D008647 5.1e-64 248.8 277 54.5
Zm00001eb056950 Zea mays HOM05D006957 ORTHO05D008647 5.1e-64 248.8 206 62.1
CDE05G2181 Ceratophyllum demersum HOM05D006957 ORTHO05D008647 2.0e-60 236.9 180 64.4
Nn1g07184 Nelumbo nucifera HOM05D006957 ORTHO05D008647 2.7e-57 226.5 192 64.1
CiPaw.09G093600 Carya illinoinensis HOM05D006957 ORTHO05D008647 1.9e-55 220.3 235 55.3
Mapoly0071s0090 Marchantia polymorpha HOM05D006957 ORTHO05D008647 2.1e-54 216.9 184 58.2
Sc05g0009300 Simmondsia chinensis HOM05D006957 ORTHO05D008647 2.1e-54 216.9 185 63.2
Pp3c10_11430 Physcomitrium patens HOM05D006957 ORTHO05D008647 1.4e-50 204.1 186 57.0
SMO347G0662 Selaginella moellendorffii HOM05D006957 ORTHO05D008647 1.5e-44 184.1 185 50.3
CiPaw.10G072800 Carya illinoinensis HOM05D006957 ORTHO05D008647 4.8e-38 162.5 107 74.8
Oeu051204.1 Olea europaea HOM05D006957 ORTHO05D008647 1.2e-36 157.9 95 78.9
arahy.Tifrunner.gnm1.ann1.EAEB6D Arachis hypogaea HOM05D006957 ORTHO05D008647 9.1e-21 105.1 88 62.5
TAR627G0415 Trochodendron aralioides HOM05D006957 ORTHO05D008647 2.6e-20 103.6 83 66.3
SEGI_02842 Sequoiadendron giganteum HOM05D006957 ORTHO05D008647 4.7e-17 92.8 115 47.8
Dinv20064 Davidia involucrata HOM05D006957 ORTHO05D008647 5.7e-15 85.9 159 37.7
CiPaw.10G072900 Carya illinoinensis HOM05D006957 ORTHO05D008647 1.7e-14 84.3 77 58.4
Cre02.g141850 Chlamydomonas reinhardtii HOM05D006957 ORTHO05D008647 2.2e-14 84.0 148 33.1
AagrBONN_evm.TU.Sc2ySwM_228.4491 Anthoceros agrestis HOM05D006957 ORTHO05D008647 4.7e-09 66.2 93 40.9


User provided reference genes

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