Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p67140 Brassica napus HOM05D009123 ORTHO05D011699 5.3e-72 274.2 137 100.0
BolC4t24290H Brassica oleracea HOM05D009123 ORTHO05D011699 2.0e-63 245.7 127 96.1
BraA01t02761Z Brassica rapa HOM05D009123 ORTHO05D011699 9.0e-48 193.7 94 100.0
C04p27520 Brassica napus HOM05D009123 ORTHO05D011699 3.4e-39 165.2 84 94.0
BcaB02g10130 Brassica carinata HOM05D009123 ORTHO05D011699 6.5e-30 134.4 161 45.3
Thhalv10014916m.g Eutrema salsugineum HOM05D009123 ORTHO05D011699 1.9e-29 132.9 155 46.5
A07p18490 Brassica napus HOM05D009123 ORTHO05D011699 1.0e-27 127.1 162 46.3
BraA07t29565Z Brassica rapa HOM05D009123 ORTHO05D011699 1.0e-27 127.1 162 46.3
BcaC02g10927 Brassica carinata HOM05D009123 ORTHO05D011699 1.8e-27 126.3 162 45.1
C04p23580 Brassica napus HOM05D009123 ORTHO05D011699 1.8e-27 126.3 162 45.1
BcaB05g21892 Brassica carinata HOM05D009123 ORTHO05D011699 3.7e-25 118.6 161 43.5
BraA02t04707Z Brassica rapa HOM05D009123 ORTHO05D011699 4.8e-25 118.2 154 43.5
BcaC03g13061 Brassica carinata HOM05D009123 ORTHO05D011699 6.3e-25 117.9 154 44.8
C02p00340 Brassica napus HOM05D009123 ORTHO05D011699 6.3e-25 117.9 154 44.8
BolC2t06034H Brassica oleracea HOM05D009123 ORTHO05D011699 6.3e-25 117.9 154 44.8
CARHR119510 Cardamine hirsuta HOM05D009123 ORTHO05D011699 3.0e-19 99.0 165 40.0
Carub.0004s0766 Capsella rubella HOM05D009123 ORTHO05D011699 9.7e-18 94.0 166 40.4
AT5G23820 Arabidopsis thaliana HOM05D009123 ORTHO05D011699 1.2e-15 87.0 164 37.8
AT5G23840 Arabidopsis thaliana HOM05D009123 ORTHO05D011699 1.6e-15 86.7 166 36.1
C03p81730 Brassica napus HOM05D009123 ORTHO05D011699 3.5e-15 85.5 177 33.9
BolC3t20444H Brassica oleracea HOM05D009123 ORTHO05D011699 3.5e-15 85.5 177 33.9
AT5G23830 Arabidopsis thaliana HOM05D009123 ORTHO05D011699 5.9e-15 84.7 165 36.4
BcaB04g18529 Brassica carinata HOM05D009123 ORTHO05D011699 5.9e-15 84.7 177 33.3
A08p14150 Brassica napus HOM05D009123 ORTHO05D011699 7.7e-15 84.3 177 33.3
BcaC01g00598 Brassica carinata HOM05D009123 ORTHO05D011699 1.7e-14 83.2 177 32.8
AL6G35100 Arabidopsis lyrata HOM05D009123 ORTHO05D011699 1.5e-13 80.1 164 35.4
Sp6g40410 Schrenkiella parvula HOM05D009123 ORTHO05D011699 4.2e-13 78.6 143 35.7
BraA08t33409Z Brassica rapa HOM05D009123 ORTHO05D011699 1.2e-12 77.0 93 39.8
BcaC02g07810 Brassica carinata HOM05D030909 ORTHO05D027123 2.0e-10 69.7 74 45.9
BcaB06g28710 Brassica carinata HOM05D030909 ORTHO05D027123 5.7e-10 68.2 74 45.9
Thhalv10029005m.g Eutrema salsugineum HOM05D009123 ORTHO05D195657 4.8e-09 65.1 164 32.3
Carub.0003s2749 Capsella rubella HOM05D009123 ORTHO05D038737 1.4e-08 63.5 170 32.9
CARHR152880 Cardamine hirsuta HOM05D002139 ORTHO05D002264 3.1e-08 62.4 92 41.3
AL5G22100 Arabidopsis lyrata HOM05D002139 ORTHO05D002264 4.1e-08 62.0 92 41.3
AL6G35080 Arabidopsis lyrata HOM05D009123 ORTHO05D011699 4.1e-08 62.0 73 46.6
AT2G26370 Arabidopsis thaliana HOM05D009123 ORTHO05D038737 5.4e-08 61.6 174 30.5
Carub.0005s0985 Capsella rubella HOM05D002139 ORTHO05D002264 5.4e-08 61.6 92 40.2
Sp5g17230 Schrenkiella parvula HOM05D002139 ORTHO05D002264 5.4e-08 61.6 92 42.4
AT3G44100 Arabidopsis thaliana HOM05D002139 ORTHO05D002264 1.6e-07 60.1 77 46.8
THA.LOC104810941 Tarenaya hassleriana HOM05D002139 ORTHO05D002264 1.6e-07 60.1 92 40.2
C03p20560 Brassica napus HOM05D025788 ORTHO05D019748 2.7e-07 59.3 149 30.2
BcaB01g01201 Brassica carinata HOM05D002139 ORTHO05D002264 4.5e-07 58.5 97 41.2
BraA06t25309Z Brassica rapa HOM05D002139 ORTHO05D002264 5.9e-07 58.2 97 41.2
Sp2g30780 Schrenkiella parvula HOM05D009123 ORTHO05D019748 1.7e-06 56.6 93 36.6
A06p22210 Brassica napus HOM05D002139 ORTHO05D002264 2.9e-06 55.8 97 40.2
BcaC01g02081 Brassica carinata HOM05D002139 ORTHO05D002264 3.8e-06 55.5 97 40.2
C03p68780 Brassica napus HOM05D002139 ORTHO05D002264 3.8e-06 55.5 97 40.2
BolC3t19132H Brassica oleracea HOM05D002139 ORTHO05D002264 3.8e-06 55.5 97 40.2
BolC3t14436H Brassica oleracea HOM05D025788 ORTHO05D019748 6.6e-06 54.7 46 50.0
BolC3t14467H Brassica oleracea HOM05D025788 ORTHO05D019748 6.6e-06 54.7 46 50.0
Thhalv10003282m.g Eutrema salsugineum HOM05D009123 ORTHO05D019748 6.6e-06 54.7 69 43.5


User provided reference genes

Program Settings