Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p66860 Brassica napus HOM05D003513 ORTHO05D004660 6.1e-33 143.7 78 100.0
A08p11320 Brassica napus HOM05D003513 ORTHO05D004660 1.3e-22 109.4 58 94.8
A10p16400 Brassica napus HOM05D003513 ORTHO05D004660 1.3e-22 109.4 58 94.8
C06p15560 Brassica napus HOM05D003513 ORTHO05D004660 1.3e-22 109.4 58 94.8
C08p23080 Brassica napus HOM05D003513 ORTHO05D004660 1.3e-22 109.4 58 94.8
BcaC04g20358 Brassica carinata HOM05D003513 ORTHO05D004660 2.2e-22 108.6 70 84.3
BraA01t02793Z Brassica rapa HOM05D004336 ORTHO05D004660 2.8e-22 108.2 60 93.3
AT4G33690 Arabidopsis thaliana HOM05D003513 ORTHO05D004660 4.9e-22 107.5 60 90.0
C03p42610 Brassica napus HOM05D003513 ORTHO05D004660 4.9e-22 107.5 60 91.7
Carub.0007s0673 Capsella rubella HOM05D003513 ORTHO05D004660 4.9e-22 107.5 60 90.0
A03p61430 Brassica napus HOM05D003513 ORTHO05D004660 6.3e-22 107.1 59 94.9
C06p18710 Brassica napus HOM05D003513 ORTHO05D004660 6.3e-22 107.1 58 91.4
AL7G17790 Arabidopsis lyrata HOM05D003513 ORTHO05D004660 1.4e-21 105.9 60 88.3
BcaC09g52179 Brassica carinata HOM05D003513 ORTHO05D004660 1.4e-21 105.9 60 88.3
A03p35030 Brassica napus HOM05D003513 ORTHO05D004660 1.4e-21 105.9 60 90.0
BolC1t00484H Brassica oleracea HOM05D003513 ORTHO05D004660 1.4e-21 105.9 60 88.3
A09p29610 Brassica napus HOM05D003513 ORTHO05D004660 2.4e-21 105.1 56 96.4
A09p33590 Brassica napus HOM05D003513 ORTHO05D004660 2.4e-21 105.1 56 96.4
Aa31LG8G12720 Aethionema arabicum HOM05D003513 ORTHO05D004660 4.1e-21 104.4 71 76.1
C01p05020 Brassica napus HOM05D003513 ORTHO05D004660 4.1e-21 104.4 59 88.1
BraA09t38150Z Brassica rapa HOM05D003513 ORTHO05D004660 7.0e-21 103.6 56 94.6
A01p04630 Brassica napus HOM05D003513 ORTHO05D004660 9.1e-21 103.2 73 74.0
BraA01t00446Z Brassica rapa HOM05D003513 ORTHO05D004660 9.1e-21 103.2 73 74.0
Sp7g31420 Schrenkiella parvula HOM05D003513 ORTHO05D004660 9.1e-21 103.2 56 92.9
THA.LOC104807196 Tarenaya hassleriana HOM05D003513 ORTHO05D004660 9.1e-21 103.2 60 85.0
BcaC08g44431 Brassica carinata HOM05D003513 ORTHO05D013524 1.2e-20 102.8 56 92.9
Sp3g05980 Schrenkiella parvula HOM05D003513 ORTHO05D004660 1.2e-20 102.8 75 76.0
BolC3t16531H Brassica oleracea HOM05D003513 ORTHO05D004660 1.6e-20 102.4 62 88.7
BcaB07g32937 Brassica carinata HOM05D003513 ORTHO05D004660 2.0e-20 102.1 60 88.3
A04p04130 Brassica napus HOM05D003513 ORTHO05D004660 2.0e-20 102.1 56 92.9
BcaB02g10961 Brassica carinata HOM05D003513 ORTHO05D004660 3.5e-20 101.3 60 88.3
BraA03t12683Z Brassica rapa HOM05D003513 ORTHO05D004660 1.3e-19 99.4 59 86.4
BraA03t15374Z Brassica rapa HOM05D003513 ORTHO05D004660 1.3e-19 99.4 56 91.1
C01p31670 Brassica napus HOM05D003513 ORTHO05D015800 3.8e-19 97.8 54 92.6
A05p21550 Brassica napus HOM05D003513 ORTHO05D004660 8.6e-19 96.7 69 78.3
BraA05t21075Z Brassica rapa HOM05D003513 ORTHO05D004660 8.6e-19 96.7 69 78.3
Carub.0003s2847 Capsella rubella HOM05D003513 ORTHO05D004660 3.3e-18 94.7 88 65.9
Psat1g212080 Pisum sativum HOM05D003513 ORTHO05D004660 4.2e-18 94.4 60 78.3
Dinv03362 Davidia involucrata HOM05D003513 ORTHO05D004660 5.5e-18 94.0 60 78.3
Manes.07G049900 Manihot esculenta HOM05D003513 ORTHO05D004660 5.5e-18 94.0 60 78.3
vmacro01922 Vaccinium macrocarpon HOM05D003513 ORTHO05D004660 5.5e-18 94.0 60 78.3
Ca_00197_v3 Cicer arietinum L. HOM05D000871 ORTHO05D000770 9.5e-18 93.2 59 76.3
MELO3C013317.2 Cucumis melo HOM05D003513 ORTHO05D004660 9.5e-18 93.2 60 78.3
CsaV3_7G001360 Cucumis sativus L. HOM05D003513 ORTHO05D004660 9.5e-18 93.2 60 78.3
GSVIVG01036987001 Vitis vinifera HOM05D003513 ORTHO05D004660 9.5e-18 93.2 60 76.7
Lj1g0004946 Lotus japonicus HOM05D003513 ORTHO05D004660 1.2e-17 92.8 60 76.7
Medtr2g010510 Medicago truncatula HOM05D003513 ORTHO05D004660 1.2e-17 92.8 60 76.7
AL3G45960 Arabidopsis lyrata HOM05D003513 ORTHO05D004660 1.6e-17 92.4 88 62.5
CiPaw.16G055200 Carya illinoinensis HOM05D003513 ORTHO05D004660 1.6e-17 92.4 60 76.7
Lj9A339T51 Lonicera japonica HOM05D003513 ORTHO05D004660 1.6e-17 92.4 75 64.0
Oeu059873.1 Olea europaea HOM05D003513 ORTHO05D004660 1.6e-17 92.4 60 76.7
BraA05t21192Z Brassica rapa HOM05D003513 ORTHO05D004660 2.8e-17 91.7 57 84.2
Oeu010478.1 Olea europaea HOM05D003513 ORTHO05D004660 3.6e-17 91.3 60 75.0
DCAR_029853 Daucus carota HOM05D003513 ORTHO05D004660 4.7e-17 90.9 75 64.0
Lsat_1_v5_gn_7_84220 Lactuca sativa HOM05D003513 ORTHO05D004660 4.7e-17 90.9 60 75.0
A05p23280 Brassica napus HOM05D003513 ORTHO05D004660 6.1e-17 90.5 46 100.0
Cfa004752 Carpinus fangiana HOM05D003513 ORTHO05D004660 6.1e-17 90.5 60 75.0
COL.COLO4_17824 Corchorus olitorius HOM05D003513 ORTHO05D004660 6.1e-17 90.5 60 73.3
Duzib052G1139 Durio zibethinus HOM05D003513 ORTHO05D004660 6.1e-17 90.5 60 73.3
Thecc.02G033900 Theobroma cacao HOM05D003513 ORTHO05D004660 6.1e-17 90.5 60 73.3
CSS0016653 Camellia sinensis var. sinensis HOM05D003513 ORTHO05D004660 8.0e-17 90.1 60 73.3
Gohir.A03G213100 Gossypium hirsutum HOM05D003513 ORTHO05D004660 8.0e-17 90.1 60 73.3
Gohir.D02G234600 Gossypium hirsutum HOM05D003513 ORTHO05D004660 8.0e-17 90.1 60 73.3
Gorai.005G262600 Gossypium raimondii HOM05D003513 ORTHO05D004660 8.0e-17 90.1 60 73.3
Hma1.2p1_0661F.1_g197860 Hydrangea macrophylla HOM05D003513 ORTHO05D004660 1.0e-16 89.7 59 76.3
ECA236G2279 Erigeron canadensis HOM05D003513 ORTHO05D004660 1.4e-16 89.4 76 64.5
FAN20G2897 Fragaria x ananassa HOM05D003513 ORTHO05D004660 1.4e-16 89.4 60 71.7
CiPaw.05G024600 Carya illinoinensis HOM05D003513 ORTHO05D004660 1.8e-16 89.0 60 71.7
Cc02_g20350 Coffea canephora HOM05D003513 ORTHO05D004660 1.8e-16 89.0 77 64.9
Actinidia00338 Actinidia chinensis HOM05D003513 ORTHO05D004660 2.3e-16 88.6 60 73.3
PGR042G0778 Punica granatum HOM05D003513 ORTHO05D004660 2.3e-16 88.6 60 71.7
Sabra09G0063800 Salix brachista HOM05D003513 ORTHO05D004660 2.3e-16 88.6 60 71.7
Atru.chr5.2163 Acer truncatum HOM05D003513 ORTHO05D004660 3.0e-16 88.2 60 73.3
ClCG02G003790 Citrullus lanatus HOM05D003513 ORTHO05D004660 3.0e-16 88.2 86 61.6
Glyma.13G253000 Glycine max HOM05D003513 ORTHO05D004660 3.0e-16 88.2 60 71.7
RcHm_v2.0_Chr6g0247131 Rosa chinensis HOM05D003513 ORTHO05D004660 3.0e-16 88.2 60 71.7
Actinidia02426 Actinidia chinensis HOM05D003513 ORTHO05D004660 4.0e-16 87.8 59 72.9
arahy.Tifrunner.gnm1.ann1.C4ZNB5 Arachis hypogaea HOM05D003513 ORTHO05D004660 4.0e-16 87.8 79 63.3
arahy.Tifrunner.gnm1.ann1.SQB86K Arachis hypogaea HOM05D003513 ORTHO05D004660 4.0e-16 87.8 79 63.3
Duzib248G1448 Durio zibethinus HOM05D003513 ORTHO05D004660 4.0e-16 87.8 60 71.7
Lj6g0027000 Lotus japonicus HOM05D003513 ORTHO05D004660 4.0e-16 87.8 75 61.3
Lj6g0027758 Lotus japonicus HOM05D003513 ORTHO05D004660 4.0e-16 87.8 75 61.3
arahy.Tifrunner.gnm1.ann1.2E8PRH Arachis hypogaea HOM05D003513 ORTHO05D004660 5.2e-16 87.4 79 63.3
arahy.Tifrunner.gnm1.ann1.K4QFJX Arachis hypogaea HOM05D003513 ORTHO05D004660 5.2e-16 87.4 79 63.3
Eucgr.I02512 Eucalyptus grandis HOM05D003513 ORTHO05D004660 5.2e-16 87.4 60 73.3
Rhsim11G0147300 Rhododendron simsii HOM05D003513 ORTHO05D004660 5.2e-16 87.4 56 76.8
Aqoxy5G03939 Aquilegia oxysepala HOM05D003513 ORTHO05D004660 6.8e-16 87.0 71 63.4
EL10Ac4g09206 Beta vulgaris HOM05D003513 ORTHO05D004660 6.8e-16 87.0 60 71.7
FvH4_2g02710 Fragaria vesca HOM05D003513 ORTHO05D004660 6.8e-16 87.0 60 70.0
FAN15G2646 Fragaria x ananassa HOM05D003513 ORTHO05D004660 6.8e-16 87.0 60 70.0
Potri.009G082200 Populus trichocarpa HOM05D003513 ORTHO05D004660 6.8e-16 87.0 60 70.0
TWI23G0398 Tripterygium wilfordii HOM05D003513 ORTHO05D004660 6.8e-16 87.0 75 60.0
Potri.001G287900 Populus trichocarpa HOM05D003513 ORTHO05D004660 8.9e-16 86.7 75 64.0
Solyc01g106560.4 Solanum lycopersicum HOM05D003513 ORTHO05D004660 1.2e-15 86.3 71 63.4
Sopen01g048910 Solanum pennellii HOM05D003513 ORTHO05D004660 1.2e-15 86.3 71 63.4
PGSC0003DMG400005104 Solanum tuberosum HOM05D003513 ORTHO05D004660 1.2e-15 86.3 71 63.4
TWI14G0477 Tripterygium wilfordii HOM05D003513 ORTHO05D004660 1.2e-15 86.3 75 58.7
CANSAT11G1387 Cannabis sativa HOM05D003513 ORTHO05D004660 1.5e-15 85.9 60 71.7
Atru.chr4.2879 Acer truncatum HOM05D003513 ORTHO05D004660 2.0e-15 85.5 71 62.0
FAN24G3528 Fragaria x ananassa HOM05D003513 ORTHO05D004660 2.0e-15 85.5 60 68.3
TAR375G0591 Trochodendron aralioides HOM05D003513 ORTHO05D004660 2.0e-15 85.5 71 62.0
Ciclev10028868m.g Citrus clementina HOM05D003513 ORTHO05D004660 2.6e-15 85.1 71 60.6
SalBow6G6243 Salvia bowleyana HOM05D003513 ORTHO05D004660 2.6e-15 85.1 59 71.2
BcaB04g17698 Brassica carinata HOM05D003513 ORTHO05D004660 3.4e-15 84.7 49 89.8
Cfa003376 Carpinus fangiana HOM05D003513 ORTHO05D004660 3.4e-15 84.7 77 62.3
FAN27G0638 Fragaria x ananassa HOM05D003513 ORTHO05D004660 3.4e-15 84.7 60 68.3
Glyma.15G062000 Glycine max HOM05D003513 ORTHO05D004660 3.4e-15 84.7 82 58.5
Lalb_Chr18g0060191 Lupinus albus HOM05D003513 ORTHO05D004660 3.4e-15 84.7 60 68.3
Nn4g22684 Nelumbo nucifera HOM05D003513 ORTHO05D004660 3.4e-15 84.7 71 60.6
Os07g0213400 Oryza sativa ssp. japonica HOM05D003513 ORTHO05D004660 3.4e-15 84.7 59 69.5
PSO339G4304 Papaver somniferum HOM05D003513 ORTHO05D004660 3.4e-15 84.7 86 60.5
Prupe.8G155900 Prunus persica HOM05D003513 ORTHO05D004660 4.4e-15 84.3 87 57.5
MD05G1110900 Malus domestica HOM05D003513 ORTHO05D004660 5.7e-15 84.0 86 57.0
VMungo0540G2261 Vigna mungo HOM05D003513 ORTHO05D004660 5.7e-15 84.0 79 59.5
QL11p027784 Quercus lobata HOM05D003513 ORTHO05D004660 7.5e-15 83.6 60 70.0
SGA_v2.0_scaffold32G12967 Striga asiatica HOM05D003513 ORTHO05D004660 7.5e-15 83.6 59 69.5
Zm00001eb325060 Zea mays HOM05D003513 ORTHO05D004660 7.5e-15 83.6 59 67.8
Cpa.g.sc20.72 Carica papaya HOM05D003513 ORTHO05D004660 9.8e-15 83.2 87 56.3
PSO384G0236 Papaver somniferum HOM05D003513 ORTHO05D004660 9.8e-15 83.2 86 59.3
Sed0007617 Sechium edule HOM05D003513 ORTHO05D004660 9.8e-15 83.2 75 58.7
Peaxi162Scf00016g03328 Petunia axillaris HOM05D003513 ORTHO05D004660 1.7e-14 82.4 76 60.5
unitig_0.g631 Utricularia gibba HOM05D003513 ORTHO05D004660 1.7e-14 82.4 59 66.1
AUR62000955 Chenopodium quinoa HOM05D003513 ORTHO05D004660 2.9e-14 81.6 75 57.3
AUR62005013 Chenopodium quinoa HOM05D003513 ORTHO05D004660 6.3e-14 80.5 75 56.0
MSTRG.8970 Avicennia marina HOM05D003513 ORTHO05D004660 8.3e-14 80.1 76 63.2
MSTRG.8971 Avicennia marina HOM05D003513 ORTHO05D004660 8.3e-14 80.1 76 61.8
SHI04900 Sapria himalayana HOM05D003513 ORTHO05D004660 1.1e-13 79.7 59 66.1
HPP92_011751 Vanilla planifolia HOM05D003513 ORTHO05D004660 1.4e-13 79.3 76 57.9
Glyma.07G229300 Glycine max HOM05D003513 ORTHO05D004660 7.0e-13 77.0 59 64.4
MBI18_g04900_MAGBIO Magnolia biondii HOM05D003513 ORTHO05D004660 9.2e-13 76.6 71 54.9
ATR0681G195 Amborella trichopoda HOM05D003513 ORTHO05D004660 4.6e-12 74.3 71 54.9
CDE04G2077 Ceratophyllum demersum HOM05D000016 ORTHO05D000538 4.6e-12 74.3 71 56.3
MBI18_g12443_MAGBIO Magnolia biondii HOM05D003513 ORTHO05D004660 5.9e-12 73.9 71 53.5
CDE07G1727 Ceratophyllum demersum HOM05D003513 ORTHO05D004660 1.0e-11 73.2 71 54.9
Gohir.A01G179633 Gossypium hirsutum HOM05D003513 ORTHO05D004660 2.9e-11 71.6 51 66.7
C09p21920 Brassica napus HOM05D001670 ORTHO05D015800 6.6e-11 70.5 50 76.0
BolC1t03102H Brassica oleracea HOM05D003531 ORTHO05D015800 1.5e-10 69.3 38 92.1
Dinv17746 Davidia involucrata HOM05D003513 ORTHO05D004660 7.3e-10 67.0 74 52.7
Gorai.002G212100 Gossypium raimondii HOM05D003513 ORTHO05D004660 7.3e-10 67.0 51 64.7
MD10G1114400 Malus domestica HOM05D003513 ORTHO05D004660 9.5e-10 66.6 47 68.1
Mapoly0037s0029 Marchantia polymorpha HOM05D003513 ORTHO05D004660 3.6e-09 64.7 59 54.2
AagrBONN_evm.TU.Sc2ySwM_289.2 Anthoceros agrestis HOM05D003513 ORTHO05D004660 1.8e-08 62.4 59 52.5
AagrBONN_evm.TU.Sc2ySwM_362.2667 Anthoceros agrestis HOM05D003513 ORTHO05D004660 1.8e-08 62.4 59 52.5
SEGI_16177 Sequoiadendron giganteum HOM05D003513 ORTHO05D004660 3.1e-08 61.6 84 45.2
A09p57370 Brassica napus HOM05D003513 ORTHO05D004660 4.0e-08 61.2 34 94.1
SMO119G0189 Selaginella moellendorffii HOM05D003513 ORTHO05D004660 6.8e-08 60.5 83 43.4
HanXRQChr17g0550541 Helianthus annuus HOM05D003513 ORTHO05D004660 1.5e-07 59.3 72 54.2
TAR629G2534 Trochodendron aralioides HOM05D003513 ORTHO05D004660 2.0e-07 58.9 58 55.2
HPP92_025257 Vanilla planifolia HOM05D003513 ORTHO05D004660 2.6e-07 58.5 68 47.1
Sabra16G0180200 Salix brachista HOM05D003513 ORTHO05D004660 2.9e-06 55.1 36 69.4
BolC8t52234H Brassica oleracea HOM05D003513 ORTHO05D004660 4.9e-06 54.3 87 46.0


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