Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p65480 Brassica napus HOM05D012766 ORTHO05D014775 2.8e-74 282.0 150 100.0
BraA03t15600Z Brassica rapa HOM05D012766 ORTHO05D014775 2.8e-74 282.0 150 100.0
C07p62580 Brassica napus HOM05D012766 ORTHO05D014775 3.4e-72 275.0 150 98.7
BolC7t46673H Brassica oleracea HOM05D012766 ORTHO05D014775 3.4e-72 275.0 150 98.7
BcaC06g33375 Brassica carinata HOM05D012766 ORTHO05D014775 4.9e-63 244.6 152 90.1
BcaNung02083 Brassica carinata HOM05D012766 ORTHO05D014775 4.9e-63 244.6 152 90.1
Sp7g35350 Schrenkiella parvula HOM05D012766 ORTHO05D014775 1.2e-48 196.8 139 77.7
Thhalv10026498m.g Eutrema salsugineum HOM05D012766 ORTHO05D014775 1.6e-45 186.4 149 71.1
AL7G12990 Arabidopsis lyrata HOM05D012766 ORTHO05D014775 2.1e-45 186.0 152 71.1
AT4G37700 Arabidopsis thaliana HOM05D012766 ORTHO05D014775 2.5e-43 179.1 145 68.3
CARHR246090 Cardamine hirsuta HOM05D012766 ORTHO05D014775 1.5e-40 169.9 148 68.9
Carub.0007s0255 Capsella rubella HOM05D012766 ORTHO05D014775 1.1e-38 163.7 155 61.9
Aa31LG6G14600 Aethionema arabicum HOM05D012766 ORTHO05D014775 8.2e-10 67.8 114 41.2
CANSAT01G1870 Cannabis sativa HOM05D001896 ORTHO05D001862 2.0e-08 63.2 165 33.9
RcHm_v2.0_Chr2g0108431 Rosa chinensis HOM05D001896 ORTHO05D001862 3.4e-08 62.4 158 36.1
Cfa004148 Carpinus fangiana HOM05D001896 ORTHO05D001862 1.7e-07 60.1 155 34.8
Haze_15187 Corylus avellana HOM05D001896 ORTHO05D001862 1.7e-07 60.1 152 34.2
Thecc.01G074600 Theobroma cacao HOM05D001896 ORTHO05D001862 1.1e-06 57.4 149 34.2
MD02G1188200 Malus domestica HOM05D001896 ORTHO05D001862 1.4e-06 57.0 84 50.0
MD15G1299400 Malus domestica HOM05D001896 ORTHO05D001862 1.4e-06 57.0 84 48.8
Gorai.003G031600 Gossypium raimondii HOM05D001896 ORTHO05D001862 5.5e-06 55.1 148 35.1
CiPaw.01G002900 Carya illinoinensis HOM05D001896 ORTHO05D001862 7.2e-06 54.7 154 35.7
Gohir.D03G029900 Gossypium hirsutum HOM05D001896 ORTHO05D001862 9.4e-06 54.3 89 43.8


User provided reference genes

Program Settings