Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p65280 Brassica napus HOM05D015565 ORTHO05D017608 3.6e-70 268.1 131 100.0
BraA03t15583Z Brassica rapa HOM05D015565 ORTHO05D017608 3.6e-70 268.1 131 100.0
A09p60390 Brassica napus HOM05D015565 ORTHO05D017608 4.4e-68 261.2 131 97.7
A01p11980 Brassica napus HOM05D015565 ORTHO05D017608 9.8e-68 260.0 131 97.7
BraA01t01140Z Brassica rapa HOM05D015565 ORTHO05D017608 9.8e-68 260.0 131 97.7
C08p07050 Brassica napus HOM05D015565 ORTHO05D017608 1.7e-64 249.2 127 95.3
BolC8t47548H Brassica oleracea HOM05D015565 ORTHO05D017608 1.7e-64 249.2 127 95.3
BolC7t44632H Brassica oleracea HOM05D015565 ORTHO05D017608 5.8e-52 207.6 120 88.3
BcaC07g37277 Brassica carinata HOM05D015565 ORTHO05D017608 1.1e-31 140.2 81 90.1
BcaC05g27392 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-24 116.7 115 55.7
BcaB08g35222 Brassica carinata HOM05D000313 ORTHO05D000065 2.8e-22 109.0 115 53.0
BraA09t35833Z Brassica rapa HOM05D000313 ORTHO05D000065 5.3e-21 104.8 114 48.2
A04p09780 Brassica napus HOM05D000313 ORTHO05D000065 2.0e-20 102.8 97 56.7
BraA04t16639Z Brassica rapa HOM05D000313 ORTHO05D000065 2.0e-20 102.8 97 56.7
A03p36970 Brassica napus HOM05D000313 ORTHO05D000065 5.8e-20 101.3 133 45.1
BraA03t12859Z Brassica rapa HOM05D000313 ORTHO05D000065 5.8e-20 101.3 133 45.1
C03p68040 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-18 97.1 114 45.6
BolC3t19028H Brassica oleracea HOM05D000313 ORTHO05D000065 1.1e-18 97.1 114 45.6
BolC5t32063H Brassica oleracea HOM05D000313 ORTHO05D000065 1.4e-18 96.7 115 45.2
BraA03t14449Z Brassica rapa HOM05D000313 ORTHO05D000065 1.9e-18 96.3 115 45.2
A03p65540 Brassica napus HOM05D000313 ORTHO05D000065 2.5e-18 95.9 115 45.2
BolC3t17675H Brassica oleracea HOM05D000313 ORTHO05D000065 2.5e-18 95.9 102 53.9
BraA03t15605Z Brassica rapa HOM05D000313 ORTHO05D000065 2.5e-18 95.9 115 45.2
BcaC09g48413 Brassica carinata HOM05D000313 ORTHO05D000065 7.1e-18 94.4 115 43.5
BolC5t33481H Brassica oleracea HOM05D000313 ORTHO05D000065 1.6e-17 93.2 106 45.3
BcaNung02470 Brassica carinata HOM05D000313 ORTHO05D000065 3.5e-17 92.0 111 44.1
C07p40640 Brassica napus HOM05D000313 ORTHO05D000065 3.5e-17 92.0 111 44.1
BraA07t29991Z Brassica rapa HOM05D000313 ORTHO05D000065 3.5e-17 92.0 128 40.6
C08p15350 Brassica napus HOM05D000313 ORTHO05D000065 6.0e-17 91.3 115 45.2
BolC3t17179H Brassica oleracea HOM05D000313 ORTHO05D000065 7.9e-17 90.9 140 42.1
C03p49010 Brassica napus HOM05D000313 ORTHO05D000065 1.3e-16 90.1 122 45.1
C01p50060 Brassica napus HOM05D000313 ORTHO05D000065 5.1e-16 88.2 109 44.0
BcaNung04477 Brassica carinata HOM05D000313 ORTHO05D000065 6.7e-16 87.8 115 40.9
C05p18010 Brassica napus HOM05D000313 ORTHO05D000065 6.7e-16 87.8 133 44.4
BolC1t04960H Brassica oleracea HOM05D000313 ORTHO05D000065 1.5e-15 86.7 112 42.9
BolC2t12325H Brassica oleracea HOM05D000313 ORTHO05D000065 1.9e-15 86.3 133 40.6
BraA08t34530Z Brassica rapa HOM05D000313 ORTHO05D000065 1.9e-15 86.3 133 40.6
A06p31410 Brassica napus HOM05D000313 ORTHO05D000065 2.5e-15 85.9 133 38.3
A09p40830 Brassica napus HOM05D000313 ORTHO05D000065 2.5e-15 85.9 133 38.3
C08p36910 Brassica napus HOM05D000313 ORTHO05D000065 3.3e-15 85.5 112 43.8
C02p24580 Brassica napus HOM05D000313 ORTHO05D000065 4.3e-15 85.1 112 42.0
A02p25350 Brassica napus HOM05D000313 ORTHO05D000065 2.8e-14 82.4 97 52.6
BraA02t07522Z Brassica rapa HOM05D000313 ORTHO05D000065 6.3e-14 81.3 105 47.6
BcaNung02693 Brassica carinata HOM05D000313 ORTHO05D000065 8.2e-14 80.9 101 45.5
BcaB05g24308 Brassica carinata HOM05D000313 ORTHO05D000065 1.1e-13 80.5 115 42.6
C07p18950 Brassica napus HOM05D000313 ORTHO05D000065 1.4e-13 80.1 117 43.6
BcaC01g03291 Brassica carinata HOM05D000313 ORTHO05D000065 1.8e-13 79.7 53 75.5
C02p57090 Brassica napus HOM05D000313 ORTHO05D000065 3.1e-13 79.0 133 37.6
BraA07t31324Z Brassica rapa HOM05D000313 ORTHO05D000065 4.1e-13 78.6 101 44.6
C01p35780 Brassica napus HOM05D000313 ORTHO05D000065 2.6e-12 75.9 115 41.7
BolC1t03539H Brassica oleracea HOM05D000313 ORTHO05D000065 2.6e-12 75.9 115 41.7
BcaC07g37052 Brassica carinata HOM05D000313 ORTHO05D000065 4.5e-12 75.1 116 40.5
BolC2t09877H Brassica oleracea HOM05D000313 ORTHO05D000065 1.0e-11 73.9 122 41.0
BcaC01g04173 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-11 73.6 93 41.9
C05p33380 Brassica napus HOM05D000313 ORTHO05D000065 2.2e-11 72.8 98 42.9
A07p04670 Brassica napus HOM05D000313 ORTHO05D042285 3.8e-11 72.0 82 51.2
BraA07t28253Z Brassica rapa HOM05D000313 ORTHO05D042285 3.8e-11 72.0 82 51.2
C05p17990 Brassica napus HOM05D000313 ORTHO05D000065 6.5e-11 71.2 116 37.1
C07p50150 Brassica napus HOM05D000313 ORTHO05D000065 6.5e-11 71.2 92 43.5
A02p26890 Brassica napus HOM05D000313 ORTHO05D000065 2.5e-10 69.3 121 36.4
A07p16160 Brassica napus HOM05D000313 ORTHO05D000065 2.5e-10 69.3 91 44.0
A08p20960 Brassica napus HOM05D000313 ORTHO05D000065 2.5e-10 69.3 91 44.0
C04p56080 Brassica napus HOM05D014693 ORTHO05D039701 2.5e-10 69.3 80 51.2
BolC3t21647H Brassica oleracea HOM05D000313 ORTHO05D000065 2.5e-10 69.3 108 38.0
A05p29610 Brassica napus HOM05D000313 ORTHO05D000065 3.2e-10 68.9 117 35.9
BcaC07g36916 Brassica carinata HOM05D000313 ORTHO05D000065 4.2e-10 68.6 114 35.1
BolC8t46904H Brassica oleracea HOM05D000313 ORTHO05D000065 4.2e-10 68.6 114 35.1
BcaB08g36535 Brassica carinata HOM05D000313 ORTHO05D000065 7.2e-10 67.8 109 40.4
A05p29370 Brassica napus HOM05D000313 ORTHO05D000065 7.2e-10 67.8 117 35.0
C02p38600 Brassica napus HOM05D000313 ORTHO05D000065 7.2e-10 67.8 109 38.5
BcaB07g33686 Brassica carinata HOM05D000313 ORTHO05D000065 9.3e-10 67.4 117 38.5
C01p48110 Brassica napus HOM05D000313 ORTHO05D000065 1.2e-09 67.0 114 35.1
C01p35750 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-09 66.6 117 38.5
C05p47720 Brassica napus HOM05D000313 ORTHO05D000065 2.1e-09 66.2 96 39.6
BolC4t25625H Brassica oleracea HOM05D000313 ORTHO05D000065 2.1e-09 66.2 115 38.3
C01p51210 Brassica napus HOM05D000313 ORTHO05D000065 2.7e-09 65.9 115 39.1
C07p23830 Brassica napus HOM05D000313 ORTHO05D000065 2.7e-09 65.9 118 39.0
BolC7t43564H Brassica oleracea HOM05D000313 ORTHO05D000065 2.7e-09 65.9 115 38.3
A07p14660 Brassica napus HOM05D000313 ORTHO05D000065 3.5e-09 65.5 110 37.3
C07p15520 Brassica napus HOM05D000313 ORTHO05D000065 3.5e-09 65.5 108 37.0
C09p21420 Brassica napus HOM05D000313 ORTHO05D000065 4.6e-09 65.1 109 41.3
BcaC07g37361 Brassica carinata HOM05D000313 ORTHO05D000065 6.1e-09 64.7 115 36.5
BolC8t47661H Brassica oleracea HOM05D000313 ORTHO05D000065 6.1e-09 64.7 115 36.5
BcaC05g28021 Brassica carinata HOM05D000313 ORTHO05D000065 7.9e-09 64.3 51 64.7
C07p41060 Brassica napus HOM05D026226 ORTHO05D027671 7.9e-09 64.3 33 100.0
A01p40600 Brassica napus HOM05D000313 ORTHO05D000065 1.0e-08 63.9 114 38.6
BraA01t02560Z Brassica rapa HOM05D000313 ORTHO05D000065 1.0e-08 63.9 114 38.6
BcaB05g23049 Brassica carinata HOM05D000313 ORTHO05D000065 1.3e-08 63.5 98 38.8
BcaB01g05260 Brassica carinata HOM05D000313 ORTHO05D000065 1.8e-08 63.2 86 41.9
BolC2t07261H Brassica oleracea HOM05D000313 ORTHO05D000065 2.3e-08 62.8 53 62.3
BraA02t08012Z Brassica rapa HOM05D000313 ORTHO05D000065 2.3e-08 62.8 104 38.5
BolC5t32686H Brassica oleracea HOM05D000313 ORTHO05D000065 3.9e-08 62.0 94 39.4
BolC9t57465H Brassica oleracea HOM05D000313 ORTHO05D039480 3.9e-08 62.0 53 69.8
BcaC09g49275 Brassica carinata HOM05D000313 ORTHO05D000065 5.1e-08 61.6 104 40.4
BcaNung03865 Brassica carinata HOM05D000313 ORTHO05D000065 5.1e-08 61.6 107 38.3
BcaC02g10698 Brassica carinata HOM05D000313 ORTHO05D000065 6.7e-08 61.2 104 35.6
C04p26780 Brassica napus HOM05D000313 ORTHO05D000065 1.1e-07 60.5 98 36.7
BolC4t24124H Brassica oleracea HOM05D000313 ORTHO05D000065 1.1e-07 60.5 98 36.7
BcaB06g27595 Brassica carinata HOM05D000313 ORTHO05D000065 1.5e-07 60.1 107 32.7
BcaC09g51352 Brassica carinata HOM05D000313 ORTHO05D000065 1.5e-07 60.1 99 35.4
BcaC02g09918 Brassica carinata HOM05D000313 ORTHO05D000065 1.9e-07 59.7 99 35.4
C04p35220 Brassica napus HOM05D000313 ORTHO05D000065 1.9e-07 59.7 99 35.4
BolC4t25076H Brassica oleracea HOM05D000313 ORTHO05D000065 1.9e-07 59.7 99 35.4
BcaB01g02596 Brassica carinata HOM05D002389 ORTHO05D000065 2.5e-07 59.3 74 50.0
BcaC03g15390 Brassica carinata HOM05D000313 ORTHO05D000065 2.5e-07 59.3 115 35.7
C08p08080 Brassica napus HOM05D000313 ORTHO05D000065 2.5e-07 59.3 98 35.7
BolC8t47221H Brassica oleracea HOM05D000313 ORTHO05D000065 2.5e-07 59.3 65 49.2
BcaC01g00020 Brassica carinata HOM05D000313 ORTHO05D000065 4.3e-07 58.5 95 38.9
C01p40640 Brassica napus HOM05D000313 ORTHO05D000065 4.3e-07 58.5 108 33.3
BolC2t12255H Brassica oleracea HOM05D000313 ORTHO05D000065 4.3e-07 58.5 53 60.4
BolC7t42040H Brassica oleracea HOM05D000313 ORTHO05D000065 4.3e-07 58.5 108 36.1
C03p79730 Brassica napus HOM05D000313 ORTHO05D000065 5.7e-07 58.2 107 33.6
C06p35960 Brassica napus HOM05D000313 ORTHO05D000065 5.7e-07 58.2 50 58.0
C09p46520 Brassica napus HOM05D000313 ORTHO05D000065 5.7e-07 58.2 61 54.1
BolC9t57505H Brassica oleracea HOM05D000313 ORTHO05D000065 5.7e-07 58.2 61 54.1
BcaC06g35487 Brassica carinata HOM05D000313 ORTHO05D000065 7.4e-07 57.8 92 37.0
BcaB01g03092 Brassica carinata HOM05D000313 ORTHO05D000065 9.7e-07 57.4 58 53.4
BraA08t34048Z Brassica rapa HOM05D000313 ORTHO05D000065 9.7e-07 57.4 104 37.5
C04p40420 Brassica napus HOM05D000313 ORTHO05D000065 1.6e-06 56.6 142 30.3
BcaB02g06416 Brassica carinata HOM05D000313 ORTHO05D000065 2.2e-06 56.2 118 31.4
BcaC04g22281 Brassica carinata HOM05D000313 ORTHO05D000065 2.2e-06 56.2 84 42.9
A01p07440 Brassica napus HOM05D000313 ORTHO05D000065 2.2e-06 56.2 94 37.2
BolC3t20344H Brassica oleracea HOM05D000313 ORTHO05D000065 2.2e-06 56.2 57 50.9
BcaC05g28024 Brassica carinata HOM05D000313 ORTHO05D000065 3.7e-06 55.5 76 46.1
BcaC08g43805 Brassica carinata HOM05D000313 ORTHO05D000065 3.7e-06 55.5 103 31.1
C05p40380 Brassica napus HOM05D000313 ORTHO05D000065 3.7e-06 55.5 76 46.1
BolC1t03534H Brassica oleracea HOM05D000313 ORTHO05D000065 3.7e-06 55.5 114 36.0
BolC5t32778H Brassica oleracea HOM05D000313 ORTHO05D000065 3.7e-06 55.5 76 46.1
BcaB01g03278 Brassica carinata HOM05D017000 ORTHO05D000065 4.8e-06 55.1 45 66.7
C06p11820 Brassica napus HOM05D000313 ORTHO05D024047 4.8e-06 55.1 103 31.1
BraA03t09628Z Brassica rapa HOM05D000313 ORTHO05D000065 6.3e-06 54.7 86 41.9
BcaB06g28669 Brassica carinata HOM05D000313 ORTHO05D000065 8.2e-06 54.3 45 66.7
A08p13660 Brassica napus HOM05D000313 ORTHO05D000065 8.2e-06 54.3 53 52.8


User provided reference genes

Program Settings