Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p62520 Brassica napus HOM05D009953 ORTHO05D003195 1.4e-113 412.9 208 100.0
BraA03t15320Z Brassica rapa HOM05D009953 ORTHO05D003195 2.1e-104 382.5 208 94.2
C07p60100 Brassica napus HOM05D009953 ORTHO05D003195 1.7e-98 362.8 209 90.4
BolC7t46450H Brassica oleracea HOM05D009953 ORTHO05D003195 1.1e-97 360.1 209 90.0
BcaNung03354 Brassica carinata HOM05D000546 ORTHO05D000398 2.2e-77 292.7 218 76.6
Sp7g31720 Schrenkiella parvula HOM05D009953 ORTHO05D003195 3.6e-64 248.8 237 63.7
Sp7g31710 Schrenkiella parvula HOM05D009953 ORTHO05D003195 8.0e-64 247.7 233 63.9
BcaC01g00943 Brassica carinata HOM05D009953 ORTHO05D003195 7.8e-59 231.1 222 63.1
Thhalv10026267m.g Eutrema salsugineum HOM05D009953 ORTHO05D003195 1.0e-58 230.7 221 64.3
BcaB03g11864 Brassica carinata HOM05D009953 ORTHO05D003195 1.3e-58 230.3 222 63.1
BcaNung03785 Brassica carinata HOM05D009953 ORTHO05D003195 8.6e-58 227.6 211 65.4
BraA01t00428Z Brassica rapa HOM05D009953 ORTHO05D003195 8.6e-58 227.6 215 67.0
BolC1t00464H Brassica oleracea HOM05D009953 ORTHO05D003195 2.8e-56 222.6 208 64.9
BolC3t20907H Brassica oleracea HOM05D009953 ORTHO05D003195 4.7e-56 221.9 218 61.9
C03p86190 Brassica napus HOM05D009953 ORTHO05D003195 3.1e-55 219.2 207 62.8
Aa31LG2G16400 Aethionema arabicum HOM05D009953 ORTHO05D003195 2.0e-51 206.5 230 55.2
C01p04800 Brassica napus HOM05D009953 ORTHO05D003195 1.7e-50 203.4 208 62.0
CARHR242110 Cardamine hirsuta HOM05D009953 ORTHO05D003195 1.9e-49 199.9 221 58.4
AL7G17410 Arabidopsis lyrata HOM05D009953 ORTHO05D003195 3.7e-45 185.7 238 55.0
A08p17220 Brassica napus HOM05D009953 ORTHO05D003195 1.4e-44 183.7 219 55.7
BraA08t33685Z Brassica rapa HOM05D009953 ORTHO05D003195 5.4e-44 181.8 218 55.5
Carub.0007s0642 Capsella rubella HOM05D009953 ORTHO05D003195 1.2e-38 164.1 254 48.0
AT4G33980 Arabidopsis thaliana HOM05D009953 ORTHO05D003195 4.1e-36 155.6 236 47.9
A01p04400 Brassica napus HOM05D009953 ORTHO05D003195 1.4e-31 140.6 165 56.4
THA.LOC104819577 Tarenaya hassleriana HOM05D009953 ORTHO05D003195 6.4e-29 131.7 235 40.9
THA.LOC104807270 Tarenaya hassleriana HOM05D009953 ORTHO05D003195 3.2e-20 102.8 207 38.2
Gohir.A12G023800 Gossypium hirsutum HOM05D003792 ORTHO05D003195 1.8e-10 70.5 173 34.1
Dinv42162 Davidia involucrata HOM05D003792 ORTHO05D003195 6.7e-10 68.6 225 32.4
Rhsim11G0165200 Rhododendron simsii HOM05D003792 ORTHO05D003195 2.5e-09 66.6 187 30.5
FAN15G1261 Fragaria x ananassa HOM05D003792 ORTHO05D003195 7.4e-09 65.1 201 32.3
Oeu025580.1 Olea europaea HOM05D003792 ORTHO05D003195 1.3e-08 64.3 218 30.3
FvH4_2g34400 Fragaria vesca HOM05D003792 ORTHO05D003195 1.6e-08 63.9 201 29.9
Gohir.D12G024500 Gossypium hirsutum HOM05D003792 ORTHO05D003195 1.6e-08 63.9 200 32.0
Gorai.008G024800 Gossypium raimondii HOM05D003792 ORTHO05D003195 1.6e-08 63.9 200 32.0
Medtr4g085990 Medicago truncatula HOM05D003792 ORTHO05D003195 2.8e-08 63.2 227 27.8
Oeu012963.1 Olea europaea HOM05D003792 ORTHO05D003195 3.7e-08 62.8 214 27.1
Thecc.08G006700 Theobroma cacao HOM05D003792 ORTHO05D003195 3.7e-08 62.8 214 30.8
Cpa.g.sc62.6 Carica papaya HOM05D003792 ORTHO05D003195 6.2e-08 62.0 147 33.3
Dinv15716 Davidia involucrata HOM05D003792 ORTHO05D003195 6.2e-08 62.0 228 30.3
Glyma.07G213000 Glycine max HOM05D003792 ORTHO05D003195 1.1e-07 61.2 206 29.1
AT5G42900 Arabidopsis thaliana HOM05D003792 ORTHO05D003195 1.4e-07 60.8 219 29.2
CSS0015140 Camellia sinensis var. sinensis HOM05D003792 ORTHO05D003195 1.4e-07 60.8 194 30.4
Manes.18G037600 Manihot esculenta HOM05D003792 ORTHO05D003195 1.4e-07 60.8 213 29.6
RcHm_v2.0_Chr6g0307971 Rosa chinensis HOM05D003792 ORTHO05D003195 1.4e-07 60.8 205 28.8
COL.COLO4_26514 Corchorus olitorius HOM05D003792 ORTHO05D003195 1.8e-07 60.5 210 30.0
HanXRQChr14g0439641 Helianthus annuus HOM05D003792 ORTHO05D003195 1.8e-07 60.5 189 33.3
ECA232G3551 Erigeron canadensis HOM05D003792 ORTHO05D003195 3.1e-07 59.7 201 28.4
Thecc.02G101400 Theobroma cacao HOM05D003792 ORTHO05D003195 4.0e-07 59.3 193 29.0
CSS0036112 Camellia sinensis var. sinensis HOM05D003792 ORTHO05D003195 5.3e-07 58.9 202 28.7
Duzib052G0481 Durio zibethinus HOM05D003792 ORTHO05D003195 5.3e-07 58.9 166 33.7
Duzib248G0608 Durio zibethinus HOM05D003792 ORTHO05D003195 5.3e-07 58.9 200 31.0
Prupe.8G126300 Prunus persica HOM05D003792 ORTHO05D003195 5.3e-07 58.9 79 40.5
ClCG05G019900 Citrullus lanatus HOM05D004168 ORTHO05D004999 6.9e-07 58.5 231 26.0
Duzib116G0066 Durio zibethinus HOM05D003792 ORTHO05D003195 6.9e-07 58.5 183 33.3
Phvul.003G291900 Phaseolus vulgaris HOM05D003792 ORTHO05D003195 9.0e-07 58.2 184 28.3
AL8G18050 Arabidopsis lyrata HOM05D003792 ORTHO05D003195 1.5e-06 57.4 189 27.5
Duzib093G2220 Durio zibethinus HOM05D003792 ORTHO05D003195 1.5e-06 57.4 179 30.7
MD05G1081700 Malus domestica HOM05D003792 ORTHO05D003195 2.0e-06 57.0 207 28.0
Aqoxy6G01313 Aquilegia oxysepala HOM05D003792 ORTHO05D003195 2.6e-06 56.6 222 28.4
arahy.Tifrunner.gnm1.ann1.ND8QY1 Arachis hypogaea HOM05D003792 ORTHO05D003195 3.4e-06 56.2 199 29.1
arahy.Tifrunner.gnm1.ann1.V1SQNE Arachis hypogaea HOM05D003792 ORTHO05D003195 3.4e-06 56.2 199 29.1
COL.COLO4_32649 Corchorus olitorius HOM05D003465 ORTHO05D004034 3.4e-06 56.2 68 48.5
MSTRG.24332 Avicennia marina HOM05D003792 ORTHO05D003195 4.5e-06 55.8 183 31.1
Gohir.A06G018700 Gossypium hirsutum HOM05D003792 ORTHO05D003195 5.8e-06 55.5 217 27.6
CANSAT25G3506 Cannabis sativa HOM05D003792 ORTHO05D003195 7.6e-06 55.1 192 32.3
QL11p035325 Quercus lobata HOM05D003792 ORTHO05D003195 7.6e-06 55.1 202 29.2
Aqoxy5G01231 Aquilegia oxysepala HOM05D003792 ORTHO05D003195 9.9e-06 54.7 181 29.3
VMungo0647G0635 Vigna mungo HOM05D003792 ORTHO05D003195 9.9e-06 54.7 188 25.5


User provided reference genes

Program Settings