Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p61820 Brassica napus HOM05D005195 ORTHO05D006088 8.5e-204 713.4 342 100.0
BraA03t15220Z Brassica rapa HOM05D005195 ORTHO05D006088 3.3e-200 701.4 343 98.8
BcaNung02154 Brassica carinata HOM05D005195 ORTHO05D006088 5.9e-173 610.9 344 89.5
C07p59500 Brassica napus HOM05D005195 ORTHO05D006088 5.9e-173 610.9 344 89.5
BolC7t46394H Brassica oleracea HOM05D005195 ORTHO05D006088 3.8e-172 608.2 343 89.2
Thhalv10025620m.g Eutrema salsugineum HOM05D005195 ORTHO05D006088 1.6e-157 559.7 354 81.6
A01p05070 Brassica napus HOM05D005195 ORTHO05D006088 2.0e-152 542.7 356 81.2
Sp7g30880 Schrenkiella parvula HOM05D005195 ORTHO05D006088 1.7e-151 539.7 333 83.8
C01p05540 Brassica napus HOM05D005195 ORTHO05D006088 1.9e-150 536.2 356 78.7
BolC1t00534H Brassica oleracea HOM05D005195 ORTHO05D006088 1.9e-150 536.2 356 78.7
AT4G33140 Arabidopsis thaliana HOM05D005195 ORTHO05D006088 3.0e-148 528.9 358 77.1
BraA01t00489Z Brassica rapa HOM05D005195 ORTHO05D006088 1.1e-147 526.9 356 79.5
Carub.0007s0732 Capsella rubella HOM05D005195 ORTHO05D006088 4.3e-147 525.0 357 76.8
AL7G18430 Arabidopsis lyrata HOM05D005195 ORTHO05D006088 1.4e-145 520.0 361 76.5
BcaC09g52118 Brassica carinata HOM05D005195 ORTHO05D006088 2.4e-142 509.2 356 77.0
Aa31sc810G10 Aethionema arabicum HOM05D005195 ORTHO05D006088 3.9e-132 475.3 355 71.3
THA.LOC104804446 Tarenaya hassleriana HOM05D005195 ORTHO05D006088 4.8e-122 441.8 347 69.2
Gorai.010G094600 Gossypium raimondii HOM05D005195 ORTHO05D006088 5.6e-107 391.7 326 62.6
Gohir.D06G081300 Gossypium hirsutum HOM05D005195 ORTHO05D006088 7.4e-107 391.3 326 62.3
Gohir.A06G082100 Gossypium hirsutum HOM05D005195 ORTHO05D006088 1.4e-105 387.1 303 65.3
Cpa.g.sc82.43 Carica papaya HOM05D005195 ORTHO05D006088 2.2e-103 379.8 286 67.8
Eucgr.C00758 Eucalyptus grandis HOM05D005195 ORTHO05D006088 2.5e-102 376.3 293 64.5
GSVIVG01014997001 Vitis vinifera HOM05D005195 ORTHO05D006088 4.2e-102 375.6 292 63.7
Atru.chr7.1799 Acer truncatum HOM05D005195 ORTHO05D006088 1.2e-101 374.0 281 69.4
Thecc.09G067900 Theobroma cacao HOM05D005195 ORTHO05D006088 3.5e-101 372.5 304 63.2
Duzib150G0538 Durio zibethinus HOM05D005195 ORTHO05D006088 3.0e-100 369.4 323 61.6
RcHm_v2.0_Chr2g0096491 Rosa chinensis HOM05D005195 ORTHO05D006088 6.7e-100 368.2 295 63.1
Ciclev10008817m.g Citrus clementina HOM05D005195 ORTHO05D006088 1.1e-99 367.5 288 66.0
Gohir.A07G017900 Gossypium hirsutum HOM05D005195 ORTHO05D006088 1.1e-99 367.5 334 56.3
Gorai.001G018400 Gossypium raimondii HOM05D005195 ORTHO05D006088 8.2e-98 361.3 334 56.0
Duzib187G0988 Durio zibethinus HOM05D005195 ORTHO05D006088 3.1e-97 359.4 297 61.6
MD15G1225300 Malus domestica HOM05D005195 ORTHO05D006088 3.1e-97 359.4 295 60.7
CiPaw.03G199200 Carya illinoinensis HOM05D005195 ORTHO05D006088 4.1e-97 359.0 206 79.6
FvH4_1g09650 Fragaria vesca HOM05D005195 ORTHO05D006088 5.3e-97 358.6 206 79.6
FAN19G0176 Fragaria x ananassa HOM05D005195 ORTHO05D006088 5.3e-97 358.6 206 79.6
FAN26G0153 Fragaria x ananassa HOM05D005195 ORTHO05D006088 5.3e-97 358.6 206 79.6
FAN26G2084 Fragaria x ananassa HOM05D005195 ORTHO05D006088 5.3e-97 358.6 206 79.6
Dinv25492 Davidia involucrata HOM05D005195 ORTHO05D006088 1.2e-96 357.5 289 62.6
QL11p003443 Quercus lobata HOM05D005195 ORTHO05D006088 1.2e-96 357.5 206 80.6
TWI63G0336 Tripterygium wilfordii HOM05D005195 ORTHO05D006088 1.5e-96 357.1 280 65.7
Prupe.7G189700 Prunus persica HOM05D005195 ORTHO05D006088 2.0e-96 356.7 286 61.9
Duzib168G1130 Durio zibethinus HOM05D005195 ORTHO05D006088 3.4e-96 355.9 302 60.6
TWI34G1666 Tripterygium wilfordii HOM05D005195 ORTHO05D006088 3.4e-96 355.9 277 65.0
Gohir.D07G017700 Gossypium hirsutum HOM05D005195 ORTHO05D006088 5.9e-96 355.1 306 58.5
PSO421G0417 Papaver somniferum HOM05D005195 ORTHO05D006088 5.9e-96 355.1 207 79.7
CANSAT56G1537 Cannabis sativa HOM05D005195 ORTHO05D006088 1.7e-95 353.6 289 63.0
TAR383G0985 Trochodendron aralioides HOM05D005195 ORTHO05D006088 1.7e-95 353.6 275 65.1
PGR142G1085 Punica granatum HOM05D005195 ORTHO05D006088 2.2e-95 353.2 287 62.0
Nn6g35744 Nelumbo nucifera HOM05D005195 ORTHO05D006088 3.8e-95 352.4 238 70.2
Haze_26081 Corylus avellana HOM05D005195 ORTHO05D006088 5.0e-95 352.1 350 55.7
Cfa002928 Carpinus fangiana HOM05D005195 ORTHO05D006088 2.5e-94 349.7 206 77.7
Sabra06G0166900 Salix brachista HOM05D005195 ORTHO05D006088 3.2e-94 349.4 280 62.5
EL10Ac8g18946 Beta vulgaris HOM05D005195 ORTHO05D006088 5.5e-94 348.6 227 72.7
Hund08917 Selenicereus undatus HOM05D005195 ORTHO05D006088 5.5e-94 348.6 314 58.9
Potri.006G216500 Populus trichocarpa HOM05D005195 ORTHO05D006088 9.3e-94 347.8 282 62.4
TPR.G12689 Trifolium pratense HOM05D005195 ORTHO05D006088 1.2e-93 347.4 235 70.2
Actinidia39605 Actinidia chinensis HOM05D005195 ORTHO05D006088 2.1e-93 346.7 206 76.2
CSS0045452 Camellia sinensis var. sinensis HOM05D005195 ORTHO05D006088 2.7e-93 346.3 205 77.6
Glyma.17G044200 Glycine max HOM05D005195 ORTHO05D006088 2.7e-93 346.3 207 78.3
VMungo1215G2768 Vigna mungo HOM05D005195 ORTHO05D006088 3.6e-93 345.9 207 76.8
Lj4g0025754 Lotus japonicus HOM05D005195 ORTHO05D006088 6.1e-93 345.1 210 76.2
MD02G1105400 Malus domestica HOM05D005195 ORTHO05D006088 6.1e-93 345.1 289 59.5
Phvul.003G126200 Phaseolus vulgaris HOM05D005195 ORTHO05D006088 1.4e-92 344.0 207 76.8
arahy.Tifrunner.gnm1.ann1.EYB30S Arachis hypogaea HOM05D005195 ORTHO05D006088 1.8e-92 343.6 290 60.7
Nitab4.5_0000055g0120 Nicotiana tabacum HOM05D005195 ORTHO05D006088 2.3e-92 343.2 298 59.4
Lj6g0001650 Lotus japonicus HOM05D005195 ORTHO05D006088 3.0e-92 342.8 285 61.1
Cc00_g13790 Coffea canephora HOM05D005195 ORTHO05D006088 6.7e-92 341.7 203 75.9
Lj7A694G45 Lonicera japonica HOM05D005195 ORTHO05D006088 6.7e-92 341.7 205 77.6
Glyma.13G115600 Glycine max HOM05D005195 ORTHO05D006088 8.8e-92 341.3 207 76.8
Aqoxy7G00925 Aquilegia oxysepala HOM05D005195 ORTHO05D006088 1.1e-91 340.9 287 61.7
FAN23G0045 Fragaria x ananassa HOM05D005195 ORTHO05D006088 1.1e-91 340.9 234 69.7
Manes.16G088800 Manihot esculenta HOM05D005195 ORTHO05D006088 1.1e-91 340.9 286 60.1
Oeu010853.1 Olea europaea HOM05D005195 ORTHO05D006088 1.1e-91 340.9 283 62.2
Oeu010852.1 Olea europaea HOM05D005195 ORTHO05D006088 1.5e-91 340.5 283 62.2
Lalb_Chr07g0181481 Lupinus albus HOM05D005195 ORTHO05D006088 2.5e-91 339.7 205 77.1
PSO104G0051 Papaver somniferum HOM05D005195 ORTHO05D006088 2.5e-91 339.7 207 76.3
Psat4g019920 Pisum sativum HOM05D005195 ORTHO05D006088 2.5e-91 339.7 207 76.3
Lalb_Chr13g0299131 Lupinus albus HOM05D005195 ORTHO05D006088 3.3e-91 339.3 205 77.6
Psat1g139120 Pisum sativum HOM05D005195 ORTHO05D006088 3.3e-91 339.3 271 62.4
Sc14g0000920 Simmondsia chinensis HOM05D005195 ORTHO05D006088 4.3e-91 339.0 195 78.5
AUR62028337 Chenopodium quinoa HOM05D005195 ORTHO05D006088 5.7e-91 338.6 278 61.9
Medtr4g124450 Medicago truncatula HOM05D005195 ORTHO05D006088 5.7e-91 338.6 208 75.0
arahy.Tifrunner.gnm1.ann1.QID06X Arachis hypogaea HOM05D005195 ORTHO05D006088 7.4e-91 338.2 290 60.0
CAN.G88.12 Capsicum annuum HOM05D005195 ORTHO05D006088 9.7e-91 337.8 268 63.4
Phvul.009G221900 Phaseolus vulgaris HOM05D005195 ORTHO05D006088 9.7e-91 337.8 203 76.8
ClCG03G014710 Citrullus lanatus HOM05D005195 ORTHO05D006088 1.7e-90 337.0 206 76.7
MSTRG.26504 Avicennia marina HOM05D005195 ORTHO05D006088 2.2e-90 336.7 295 58.0
Glyma.09G077400 Glycine max HOM05D005195 ORTHO05D006088 3.7e-90 335.9 284 60.9
Nitab4.5_0001114g0020 Nicotiana tabacum HOM05D005195 ORTHO05D006088 3.7e-90 335.9 351 53.3
SalBow6G3026 Salvia bowleyana HOM05D005195 ORTHO05D006088 3.7e-90 335.9 207 75.4
Sopen07g006530 Solanum pennellii HOM05D005195 ORTHO05D006088 3.7e-90 335.9 206 74.8
VMungo1309G1826 Vigna mungo HOM05D005195 ORTHO05D006088 1.4e-89 334.0 276 60.5
Lalb_Chr12g0200391 Lupinus albus HOM05D005195 ORTHO05D006088 4.1e-89 332.4 205 75.6
CARHR241160 Cardamine hirsuta HOM05D005195 ORTHO05D006088 5.3e-89 332.0 165 90.3
AUR62025326 Chenopodium quinoa HOM05D005195 ORTHO05D006088 5.3e-89 332.0 273 61.9
CsaV3_1G041450 Cucumis sativus L. HOM05D005195 ORTHO05D006088 5.3e-89 332.0 291 59.1
Ca_21349_v3 Cicer arietinum L. HOM05D005195 ORTHO05D006088 9.1e-89 331.3 207 74.4
ATR0099G089 Amborella trichopoda HOM05D005195 ORTHO05D006088 2.0e-88 330.1 205 74.1
TPR.G25386 Trifolium pratense HOM05D005195 ORTHO05D006088 4.5e-88 328.9 275 61.5
Sed0003985 Sechium edule HOM05D005195 ORTHO05D006088 1.7e-87 327.0 209 73.2
Medtr2g044900 Medicago truncatula HOM05D005195 ORTHO05D006088 2.9e-87 326.2 205 73.7
MSTRG.19420 Avicennia marina HOM05D005195 ORTHO05D006088 3.8e-87 325.9 280 60.4
MELO3C015557.2 Cucumis melo HOM05D005195 ORTHO05D006088 3.8e-87 325.9 205 74.1
Migut.J00869 Erythranthe guttata HOM05D005195 ORTHO05D006088 7.2e-86 321.6 280 59.3
MBI19_g32876_MAGBIO Magnolia biondii HOM05D005195 ORTHO05D006088 7.2e-86 321.6 291 57.0
unitig_578.g15872 Utricularia gibba HOM05D005195 ORTHO05D006088 7.2e-86 321.6 291 55.7
Zm00001eb374160 Zea mays HOM05D005195 ORTHO05D006088 9.4e-86 321.2 204 72.5
HPP92_027596 Vanilla planifolia HOM05D005195 ORTHO05D006088 2.1e-85 320.1 269 60.2
Os06g0192900 Oryza sativa ssp. japonica HOM05D005195 ORTHO05D006088 2.7e-85 319.7 254 63.4
HPP92_002369 Vanilla planifolia HOM05D005195 ORTHO05D006088 6.1e-85 318.5 271 60.1
Actinidia33513 Actinidia chinensis HOM05D000417 ORTHO05D006088 3.9e-84 315.8 209 70.8
CDE05G1368 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 1.5e-83 313.9 205 69.3
CDE07G0654 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 2.0e-83 313.5 294 54.4
CDE06G1243 Ceratophyllum demersum HOM05D005195 ORTHO05D006088 2.8e-82 309.7 277 56.7
Rhsim05G0001200 Rhododendron simsii HOM05D005195 ORTHO05D006088 1.8e-81 307.0 263 59.3
SHI27969 Sapria himalayana HOM05D005195 ORTHO05D006088 8.5e-79 298.1 206 67.0
HPP92_019108 Vanilla planifolia HOM05D005195 ORTHO05D006088 1.4e-78 297.4 199 66.3
SEGI_21946 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 1.8e-76 290.4 220 59.1
Oeu055315.1 Olea europaea HOM05D005195 ORTHO05D006088 3.7e-74 282.7 207 64.7
Mapoly0181s0009 Marchantia polymorpha HOM05D005195 ORTHO05D006088 2.5e-70 270.0 201 58.7
Migut.L00513 Erythranthe guttata HOM05D005195 ORTHO05D006088 1.6e-69 267.3 162 72.2
Pp3c5_26930 Physcomitrium patens HOM05D005195 ORTHO05D006088 2.7e-69 266.5 222 55.9
Solyc07g017700.3 Solanum lycopersicum HOM05D005195 ORTHO05D006088 2.9e-63 246.5 151 71.5
Ca_02313_v3 Cicer arietinum L. HOM05D005195 ORTHO05D006088 3.8e-63 246.1 160 67.5
DCAR_024788 Daucus carota HOM05D005195 ORTHO05D006088 5.0e-63 245.7 152 77.0
vmacro06379 Vaccinium macrocarpon HOM05D005195 ORTHO05D006088 3.2e-62 243.0 224 54.9
Glyma.17G255700 Glycine max HOM05D005195 ORTHO05D006088 2.7e-61 240.0 144 75.0
Dinv42438 Davidia involucrata HOM05D005195 ORTHO05D006088 1.5e-59 234.2 171 67.3
Cre16.g661550 Chlamydomonas reinhardtii HOM05D005195 ORTHO05D006088 2.7e-56 223.4 242 47.9
Peaxi162Scf00452g00117 Petunia axillaris HOM05D005195 ORTHO05D006088 4.9e-50 202.6 124 71.0
EL10Ac7g16303 Beta vulgaris HOM05D005195 ORTHO05D006088 2.8e-45 186.8 152 60.5
RcHm_v2.0_Chr2g0117071 Rosa chinensis HOM05D005195 ORTHO05D006088 1.5e-43 181.0 156 55.8
PRCOL_00003934 Prasinoderma coloniale HOM05D005195 ORTHO05D006088 2.0e-43 180.6 170 52.4
Pp3c6_3390 Physcomitrium patens HOM05D005195 ORTHO05D006088 9.5e-30 135.2 112 53.6
SEGI_31296 Sequoiadendron giganteum HOM05D005195 ORTHO05D006088 2.5e-22 110.5 83 54.2
COL.COLO4_21182 Corchorus olitorius HOM05D005195 ORTHO05D006088 9.9e-19 98.6 188 41.5
SGA_v2.0_scaffold31G12703 Striga asiatica HOM05D005195 ORTHO05D006088 1.4e-17 94.7 108 51.9
Solyc07g017710.1 Solanum lycopersicum HOM05D005195 ORTHO05D006088 4.6e-16 89.7 137 44.5
PGSC0003DMG400002304 Solanum tuberosum HOM05D005195 ORTHO05D006088 1.4e-12 78.2 156 39.7
Peaxi162Scf00452g00122 Petunia axillaris HOM05D005195 ORTHO05D006088 1.8e-12 77.8 46 87.0
Migut.L01605 Erythranthe guttata HOM05D005195 ORTHO05D006088 2.4e-12 77.4 129 44.2
Ca_29779_v3 Cicer arietinum L. HOM05D000417 ORTHO05D000342 1.2e-11 75.1 51 74.5
Zm00001eb045610 Zea mays HOM05D005195 ORTHO05D006088 2.7e-08 63.9 44 70.5
EL10Ac8g18949 Beta vulgaris HOM05D005195 ORTHO05D006088 3.3e-06 57.0 37 62.2


User provided reference genes

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