Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p61670 Brassica napus HOM05D006497 ORTHO05D008263 5.0e-73 277.7 143 100.0
BraA03t15206Z Brassica rapa HOM05D006497 ORTHO05D008263 3.2e-72 275.0 143 99.3
BolC7t46384H Brassica oleracea HOM05D006497 ORTHO05D008263 2.3e-62 242.3 144 89.6
BcaNung02143 Brassica carinata HOM05D006497 ORTHO05D008263 3.9e-62 241.5 146 89.7
C07p59400 Brassica napus HOM05D006497 ORTHO05D008263 5.3e-59 231.1 143 88.8
Sp7g30690 Schrenkiella parvula HOM05D006497 ORTHO05D008263 3.7e-52 208.4 150 76.0
BcaB03g12770 Brassica carinata HOM05D006497 ORTHO05D008263 4.1e-51 204.9 146 78.8
A08p17840 Brassica napus HOM05D006497 ORTHO05D008263 1.6e-50 203.0 147 76.2
Carub.0007s0757 Capsella rubella HOM05D006497 ORTHO05D008263 3.5e-50 201.8 155 72.9
BraA08t33734Z Brassica rapa HOM05D006497 ORTHO05D008263 5.9e-50 201.1 147 75.5
C03p86910 Brassica napus HOM05D006497 ORTHO05D008263 1.7e-49 199.5 152 75.0
BolC3t20984H Brassica oleracea HOM05D006497 ORTHO05D008263 1.7e-49 199.5 152 75.0
Thhalv10026449m.g Eutrema salsugineum HOM05D006497 ORTHO05D008263 1.1e-48 196.8 160 70.6
CARHR240920 Cardamine hirsuta HOM05D006497 ORTHO05D008263 4.2e-48 194.9 157 70.1
AL7G18780 Arabidopsis lyrata HOM05D006497 ORTHO05D008263 4.7e-47 191.4 157 68.2
AT4G32915 Arabidopsis thaliana HOM05D006497 ORTHO05D008263 8.0e-47 190.7 156 67.3
Aa31LG2G18050 Aethionema arabicum HOM05D006497 ORTHO05D008263 3.0e-46 188.7 150 68.7
THA.LOC104803742 Tarenaya hassleriana HOM05D006497 ORTHO05D008263 3.0e-38 162.2 155 61.9
COL.COLO4_21011 Corchorus olitorius HOM05D006497 ORTHO05D008263 3.5e-34 148.7 134 56.7
Lsat_1_v5_gn_3_27161 Lactuca sativa HOM05D006497 ORTHO05D008263 2.3e-33 146.0 147 54.4
ECA246G5018 Erigeron canadensis HOM05D006497 ORTHO05D008263 1.1e-32 143.7 147 53.7
Gorai.001G024500 Gossypium raimondii HOM05D006497 ORTHO05D008263 1.1e-32 143.7 125 62.4
GSVIVG01035327001 Vitis vinifera HOM05D006497 ORTHO05D008263 1.1e-32 143.7 144 56.9
Ah.10g034670 Amaranthus hybridus HOM05D006497 ORTHO05D008263 1.5e-32 143.3 132 56.1
Thecc.09G049300 Theobroma cacao HOM05D006497 ORTHO05D008263 1.5e-32 143.3 126 61.1
Rhsim05G0006000 Rhododendron simsii HOM05D006497 ORTHO05D008263 1.9e-32 142.9 145 52.4
Gohir.A07G022176 Gossypium hirsutum HOM05D006497 ORTHO05D008263 2.5e-32 142.5 106 67.9
PSO210G2909 Papaver somniferum HOM05D006497 ORTHO05D008263 5.6e-32 141.4 135 56.3
Duzib168G0301 Durio zibethinus HOM05D006497 ORTHO05D008263 7.3e-32 141.0 106 67.0
Eucgr.C00622 Eucalyptus grandis HOM05D006497 ORTHO05D008263 7.3e-32 141.0 151 51.0
QL12p040844 Quercus lobata HOM05D006497 ORTHO05D008263 7.3e-32 141.0 132 54.5
CANSAT54G2618 Cannabis sativa HOM05D006497 ORTHO05D008263 1.2e-31 140.2 110 61.8
Ciclev10009788m.g Citrus clementina HOM05D006497 ORTHO05D008263 1.2e-31 140.2 153 52.3
Hma1.2p1_0049F.1_g028230 Hydrangea macrophylla HOM05D006497 ORTHO05D008263 1.2e-31 140.2 141 55.3
PSO210G1815 Papaver somniferum HOM05D006497 ORTHO05D008263 2.1e-31 139.4 129 54.3
Atru.chr7.2042 Acer truncatum HOM05D006497 ORTHO05D008263 2.8e-31 139.0 147 54.4
CSS0028638 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 3.6e-31 138.7 104 63.5
CiPaw.08G027800 Carya illinoinensis HOM05D006497 ORTHO05D008263 3.6e-31 138.7 143 53.1
PGR031G1870 Punica granatum HOM05D006497 ORTHO05D008263 3.6e-31 138.7 126 58.7
AUR62040211 Chenopodium quinoa HOM05D006497 ORTHO05D008263 4.7e-31 138.3 123 56.9
Cfa005390 Carpinus fangiana HOM05D006497 ORTHO05D008263 6.1e-31 137.9 93 68.8
EL10Ac2g03958 Beta vulgaris HOM05D006497 ORTHO05D008263 8.0e-31 137.5 143 51.7
Potri.018G058200 Populus trichocarpa HOM05D006497 ORTHO05D008263 8.0e-31 137.5 147 49.0
Haze_01965 Corylus avellana HOM05D006497 ORTHO05D008263 1.0e-30 137.1 93 68.8
CSS0007660 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 1.4e-30 136.7 150 49.3
CSS0049899 Camellia sinensis var. sinensis HOM05D006497 ORTHO05D008263 1.4e-30 136.7 150 49.3
Sc09g0009540 Simmondsia chinensis HOM05D006497 ORTHO05D008263 1.4e-30 136.7 104 61.5
DCAR_003057 Daucus carota HOM05D006497 ORTHO05D008263 2.3e-30 136.0 102 63.7
Nn8g39006 Nelumbo nucifera HOM05D006497 ORTHO05D008263 2.3e-30 136.0 105 63.8
Peaxi162Scf00840g00427 Petunia axillaris HOM05D006497 ORTHO05D008263 3.0e-30 135.6 93 67.7
RcHm_v2.0_Chr6g0306821 Rosa chinensis HOM05D006497 ORTHO05D008263 3.0e-30 135.6 134 53.0
ClCG11G014990 Citrullus lanatus HOM05D006497 ORTHO05D008263 4.0e-30 135.2 93 66.7
Nitab4.5_0000318g0100 Nicotiana tabacum HOM05D006497 ORTHO05D008263 4.0e-30 135.2 93 67.7
AUR62009213 Chenopodium quinoa HOM05D006497 ORTHO05D008263 5.2e-30 134.8 124 56.5
Solyc07g063140.1 Solanum lycopersicum HOM05D006497 ORTHO05D008263 5.2e-30 134.8 93 67.7
Sopen07g031330 Solanum pennellii HOM05D006497 ORTHO05D008263 5.2e-30 134.8 93 67.7
Actinidia18207 Actinidia chinensis HOM05D006497 ORTHO05D008263 6.8e-30 134.4 115 60.9
SalBow1G7152 Salvia bowleyana HOM05D006497 ORTHO05D008263 6.8e-30 134.4 104 58.7
Cpa.g.sc27.217 Carica papaya HOM05D006497 ORTHO05D008263 8.9e-30 134.0 124 58.1
Migut.E01547 Erythranthe guttata HOM05D006497 ORTHO05D008263 8.9e-30 134.0 93 65.6
Nitab4.5_0002021g0040 Nicotiana tabacum HOM05D006497 ORTHO05D008263 8.9e-30 134.0 93 66.7
MD08G1108800 Malus domestica HOM05D006497 ORTHO05D008263 1.2e-29 133.7 92 67.4
MELO3C003479.2 Cucumis melo HOM05D006497 ORTHO05D008263 1.5e-29 133.3 143 53.1
CsaV3_3G048400 Cucumis sativus L. HOM05D006497 ORTHO05D008263 1.5e-29 133.3 105 62.9
PGSC0003DMG400012416 Solanum tuberosum HOM05D006497 ORTHO05D008263 3.4e-29 132.1 93 67.7
Cc08_g10030 Coffea canephora HOM05D006497 ORTHO05D008263 4.4e-29 131.7 107 59.8
Prupe.1G443400 Prunus persica HOM05D006497 ORTHO05D008263 4.4e-29 131.7 151 49.7
Sabra18G0054600 Salix brachista HOM05D006497 ORTHO05D008263 4.4e-29 131.7 147 47.6
TAR636G3582 Trochodendron aralioides HOM05D006497 ORTHO05D008263 5.8e-29 131.3 105 58.1
Migut.A00169 Erythranthe guttata HOM05D006497 ORTHO05D008263 2.2e-28 129.4 104 55.8
Aqoxy6G00985 Aquilegia oxysepala HOM05D006497 ORTHO05D008263 2.9e-28 129.0 93 64.5
Nn8g40951 Nelumbo nucifera HOM05D006497 ORTHO05D008263 2.9e-28 129.0 105 61.0
Sed0009640 Sechium edule HOM05D006497 ORTHO05D008263 2.9e-28 129.0 93 63.4
MSTRG.11681 Avicennia marina HOM05D006497 ORTHO05D008263 4.9e-28 128.3 115 57.4
FvH4_2g35131 Fragaria vesca HOM05D006497 ORTHO05D008263 4.9e-28 128.3 149 51.0
CDE10G0177 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 6.4e-28 127.9 113 55.8
FAN15G0473 Fragaria x ananassa HOM05D006497 ORTHO05D008263 6.4e-28 127.9 149 49.7
arahy.Tifrunner.gnm1.ann1.0Y6FKJ Arachis hypogaea HOM05D006497 ORTHO05D008263 1.1e-27 127.1 124 56.5
Sed0025405 Sechium edule HOM05D006497 ORTHO05D008263 1.1e-27 127.1 93 62.4
CDE10G1018 Ceratophyllum demersum HOM05D006497 ORTHO05D008263 1.8e-27 126.3 108 56.5
Glyma.20G177400 Glycine max HOM05D006497 ORTHO05D008263 1.8e-27 126.3 146 50.0
arahy.Tifrunner.gnm1.ann1.E0CW41 Arachis hypogaea HOM05D006497 ORTHO05D008263 2.4e-27 125.9 130 53.8
CAN.G162.59 Capsicum annuum HOM05D006497 ORTHO05D008263 3.2e-27 125.6 93 64.5
Os03g0651000 Oryza sativa ssp. japonica HOM05D006497 ORTHO05D008263 4.1e-27 125.2 94 66.0
VMungo0720G1877 Vigna mungo HOM05D006497 ORTHO05D008263 4.1e-27 125.2 107 61.7
Glyma.10G214200 Glycine max HOM05D006497 ORTHO05D008263 5.4e-27 124.8 146 49.3
Lalb_Chr06g0162131 Lupinus albus HOM05D006497 ORTHO05D008263 5.4e-27 124.8 93 63.4
Phvul.007G091500 Phaseolus vulgaris HOM05D006497 ORTHO05D008263 5.4e-27 124.8 107 61.7
Zm00001eb218450 Zea mays HOM05D006497 ORTHO05D008263 7.0e-27 124.4 94 62.8
Ca_10596_v3 Cicer arietinum L. HOM05D006497 ORTHO05D008263 3.5e-26 122.1 107 57.0
Medtr1g095920 Medicago truncatula HOM05D006497 ORTHO05D008263 3.5e-26 122.1 114 58.8
Psat6g186080 Pisum sativum HOM05D006497 ORTHO05D008263 1.0e-25 120.6 114 57.0
TPR.G11934 Trifolium pratense HOM05D006497 ORTHO05D008263 1.0e-25 120.6 114 57.0
Lj5g0021165 Lotus japonicus HOM05D006497 ORTHO05D008263 2.3e-25 119.4 107 56.1
Oeu011793.1 Olea europaea HOM05D006497 ORTHO05D008263 1.5e-24 116.7 130 48.5
TPR.G1790 Trifolium pratense HOM05D006497 ORTHO05D008263 1.9e-24 116.3 93 60.2
Hund19485 Selenicereus undatus HOM05D006497 ORTHO05D008263 3.3e-24 115.5 184 41.3
unitig_32.g11478 Utricularia gibba HOM05D006497 ORTHO05D008263 1.6e-23 113.2 132 43.2
ATR0749G075 Amborella trichopoda HOM05D006497 ORTHO05D008263 2.8e-23 112.5 94 58.5
ATR0304G027 Amborella trichopoda HOM05D006497 ORTHO05D008263 8.0e-23 110.9 94 58.5
HanXRQChr17g0538891 Helianthus annuus HOM05D006497 ORTHO05D008263 8.9e-22 107.5 79 64.6
HPP92_013944 Vanilla planifolia HOM05D006497 ORTHO05D008263 8.9e-22 107.5 94 51.1
SEGI_35319 Sequoiadendron giganteum HOM05D006497 ORTHO05D008263 1.5e-21 106.7 101 53.5
SGA_v2.0_scaffold163G38048 Striga asiatica HOM05D006497 ORTHO05D008263 3.4e-21 105.5 160 38.1
TWI32G0413 Tripterygium wilfordii HOM05D006497 ORTHO05D008263 1.1e-19 100.5 80 63.8
SGA_v2.0_scaffold169G38673 Striga asiatica HOM05D006497 ORTHO05D008263 1.0e-17 94.0 104 49.0
arahy.Tifrunner.gnm1.ann1.2EH2S8 Arachis hypogaea HOM05D006497 ORTHO05D009640 3.0e-17 92.4 209 33.5
FAN27G1249 Fragaria x ananassa HOM05D006497 ORTHO05D008263 3.0e-17 92.4 149 43.6
Mapoly0154s0030 Marchantia polymorpha HOM05D006497 ORTHO05D008263 8.6e-17 90.9 142 41.5
Dinv27945 Davidia involucrata HOM05D006497 ORTHO05D008263 7.3e-16 87.8 56 75.0
Cre08.g364650 Chlamydomonas reinhardtii HOM05D001184 ORTHO05D007940 2.8e-15 85.9 100 43.0
vmacro08276 Vaccinium macrocarpon HOM05D006497 ORTHO05D008263 3.6e-15 85.5 61 59.0
MBI13_g05466_MAGBIO Magnolia biondii HOM05D006497 ORTHO05D008263 1.8e-14 83.2 62 66.1
Manes.03G057500 Manihot esculenta HOM05D006497 ORTHO05D008263 3.1e-14 82.4 106 52.8
Pp3c2_33430 Physcomitrium patens HOM05D006497 ORTHO05D008263 8.9e-14 80.9 93 43.0
SMO146G0150 Selaginella moellendorffii HOM05D006497 ORTHO05D008263 8.9e-14 80.9 93 44.1
CBR_g31997 Chara braunii HOM05D006497 ORTHO05D008263 5.8e-13 78.2 112 37.5
Gohir.D07G023800 Gossypium hirsutum HOM05D006497 ORTHO05D008263 7.1e-11 71.2 76 56.6
MCO07G547 Micromonas commoda HOM05D001184 ORTHO05D007940 1.1e-08 63.9 96 35.4
PRCOL_00005999 Prasinoderma coloniale HOM05D006497 ORTHO05D008263 3.6e-07 58.9 96 33.3
Rhsim07G0144900 Rhododendron simsii HOM05D006497 ORTHO05D008263 8.9e-06 54.3 42 50.0


User provided reference genes

Program Settings