Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p61610 Brassica napus HOM05D008625 ORTHO05D010623 1.7e-103 379.4 196 100.0
BraA03t15203Z Brassica rapa HOM05D008625 ORTHO05D010623 8.2e-103 377.1 196 99.5
C07p59370 Brassica napus HOM05D008625 ORTHO05D010623 1.8e-102 375.9 196 99.0
BolC7t46381H Brassica oleracea HOM05D008625 ORTHO05D010623 1.8e-102 375.9 196 99.0
BcaNung06387 Brassica carinata HOM05D008625 ORTHO05D010623 1.8e-97 359.4 191 97.4
CARHR240860 Cardamine hirsuta HOM05D008625 ORTHO05D010623 4.9e-87 324.7 197 85.8
Sp7g30630 Schrenkiella parvula HOM05D008625 ORTHO05D010623 1.4e-86 323.2 198 87.4
BcaC09g52083 Brassica carinata HOM05D008625 ORTHO05D010623 4.1e-86 321.6 196 84.7
C01p06020 Brassica napus HOM05D008625 ORTHO05D010623 4.1e-86 321.6 196 84.7
Thhalv10026293m.g Eutrema salsugineum HOM05D008625 ORTHO05D010623 1.2e-85 320.1 198 85.4
BolC1t00594H Brassica oleracea HOM05D008625 ORTHO05D010623 3.5e-85 318.5 197 85.3
AT4G32860 Arabidopsis thaliana HOM05D008625 ORTHO05D010623 3.8e-84 315.1 195 84.1
A01p05420 Brassica napus HOM05D008625 ORTHO05D010623 3.8e-84 315.1 197 83.8
BraA01t00516Z Brassica rapa HOM05D008625 ORTHO05D010623 3.8e-84 315.1 197 83.8
AL7G18860 Arabidopsis lyrata HOM05D008625 ORTHO05D010623 5.0e-84 314.7 194 84.5
Carub.0007s0763 Capsella rubella HOM05D008625 ORTHO05D010623 2.1e-82 309.3 201 83.6
A08p17870 Brassica napus HOM05D008625 ORTHO05D010623 6.1e-82 307.8 199 83.9
BraA08t33739Z Brassica rapa HOM05D008625 ORTHO05D010623 6.1e-82 307.8 199 83.9
C03p86970 Brassica napus HOM05D008625 ORTHO05D010623 1.8e-81 306.2 194 84.5
C03p86990 Brassica napus HOM05D008625 ORTHO05D010623 1.8e-81 306.2 194 84.5
BolC3t20994H Brassica oleracea HOM05D008625 ORTHO05D010623 8.9e-81 303.9 194 84.0
BcaC09g52084 Brassica carinata HOM05D008625 ORTHO05D010623 1.3e-79 300.1 197 81.2
Aa31sc706G10 Aethionema arabicum HOM05D008625 ORTHO05D010623 8.6e-76 287.3 201 76.1
BcaB03g12766 Brassica carinata HOM05D008625 ORTHO05D010623 1.4e-70 270.0 197 75.6
THA.LOC104803750 Tarenaya hassleriana HOM05D008625 ORTHO05D010623 2.4e-49 199.5 189 65.1
THA.LOC104804518 Tarenaya hassleriana HOM05D008625 ORTHO05D010623 8.2e-26 121.3 129 56.6
Medtr3g109920 Medicago truncatula HOM05D008625 ORTHO05D010623 2.4e-17 93.2 186 37.6
Cpa.g.sc7.202 Carica papaya HOM05D008625 ORTHO05D010623 6.9e-17 91.7 190 37.4
Medtr3g109900 Medicago truncatula HOM05D008625 ORTHO05D010623 1.0e-15 87.8 181 35.9
Psat5g020400 Pisum sativum HOM05D008625 ORTHO05D010623 5.0e-15 85.5 182 36.3
TPR.G15108 Trifolium pratense HOM05D008625 ORTHO05D010623 6.5e-15 85.1 188 36.7
Glyma.04G085800 Glycine max HOM05D008625 ORTHO05D010623 3.2e-14 82.8 184 34.8
VMungo1309G2682 Vigna mungo HOM05D008625 ORTHO05D010623 9.4e-14 81.3 142 40.8
Psat5g020440 Pisum sativum HOM05D008625 ORTHO05D010623 1.6e-13 80.5 186 34.4
arahy.Tifrunner.gnm1.ann1.66V3J9 Arachis hypogaea HOM05D008625 ORTHO05D010623 2.7e-13 79.7 191 35.6
Thecc.09G047000 Theobroma cacao HOM05D001131 ORTHO05D010623 4.6e-13 79.0 197 35.0
Glyma.06G087400 Glycine max HOM05D008625 ORTHO05D010623 7.9e-13 78.2 187 34.8
Phvul.009G111200 Phaseolus vulgaris HOM05D008625 ORTHO05D010623 1.0e-12 77.8 141 40.4
COL.COLO4_20990 Corchorus olitorius HOM05D001131 ORTHO05D010623 1.8e-12 77.0 203 35.5
MD15G1091300 Malus domestica HOM05D001131 ORTHO05D010623 2.3e-12 76.6 202 32.7
Ca_15580_v3 Cicer arietinum L. HOM05D008625 ORTHO05D010623 5.1e-12 75.5 151 38.4
Gohir.A06G092000 Gossypium hirsutum HOM05D001131 ORTHO05D010623 2.5e-11 73.2 213 34.3
Prupe.1G446200 Prunus persica HOM05D001131 ORTHO05D010623 2.5e-11 73.2 208 32.7
MD08G1111800 Malus domestica HOM05D008625 ORTHO05D010623 4.3e-11 72.4 209 32.5
Manes.16G074200 Manihot esculenta HOM05D001131 ORTHO05D000972 4.3e-11 72.4 220 31.4
Gorai.010G105500 Gossypium raimondii HOM05D001131 ORTHO05D010623 1.3e-10 70.9 213 33.8
GSVIVG01035287001 Vitis vinifera HOM05D001131 ORTHO05D000972 3.7e-10 69.3 218 29.8
FAN15G2009 Fragaria x ananassa HOM05D008625 ORTHO05D010623 6.3e-10 68.6 179 33.5
Gohir.D06G091500 Gossypium hirsutum HOM05D001131 ORTHO05D010623 6.3e-10 68.6 200 35.5
CANSAT25G2493 Cannabis sativa HOM05D008625 ORTHO05D010623 8.2e-10 68.2 208 30.3
Manes.03G059800 Manihot esculenta HOM05D001131 ORTHO05D000972 8.2e-10 68.2 230 29.6
FAN20G1640 Fragaria x ananassa HOM05D008625 ORTHO05D010623 1.4e-09 67.4 179 33.0
Potri.006G236700 Populus trichocarpa HOM05D001131 ORTHO05D000972 1.4e-09 67.4 210 31.9
Ciclev10009617m.g Citrus clementina HOM05D001131 ORTHO05D000972 1.8e-09 67.0 204 32.4
Lj1g0026047 Lotus japonicus HOM05D008625 ORTHO05D010623 1.8e-09 67.0 183 32.2
Sabra06G0185000 Salix brachista HOM05D001131 ORTHO05D000972 2.4e-09 66.6 220 30.0
TWI63G1453 Tripterygium wilfordii HOM05D001131 ORTHO05D000972 3.1e-09 66.2 203 31.5
Sabra18G0045000 Salix brachista HOM05D001131 ORTHO05D000972 4.1e-09 65.9 193 30.6
TAR624G0151 Trochodendron aralioides HOM05D001131 ORTHO05D000972 5.3e-09 65.5 207 30.0
CSS0013249 Camellia sinensis var. sinensis HOM05D001131 ORTHO05D000972 6.9e-09 65.1 199 31.7
Nn8g39098 Nelumbo nucifera HOM05D001131 ORTHO05D000972 6.9e-09 65.1 213 29.6
RcHm_v2.0_Chr6g0306461 Rosa chinensis HOM05D008625 ORTHO05D010623 1.5e-08 63.9 180 31.7
Lalb_Chr08g0242961 Lupinus albus HOM05D008625 ORTHO05D010623 2.6e-08 63.2 188 30.3
Potri.018G046500 Populus trichocarpa HOM05D001131 ORTHO05D000972 3.4e-08 62.8 220 30.0
Atru.chr7.2063 Acer truncatum HOM05D001131 ORTHO05D000972 4.5e-08 62.4 201 32.3
FvH4_2g35430 Fragaria vesca HOM05D008625 ORTHO05D010623 2.2e-07 60.1 181 32.0
FAN27G2073 Fragaria x ananassa HOM05D008625 ORTHO05D010623 8.5e-07 58.2 181 31.5
DCAR_032098 Daucus carota HOM05D001131 ORTHO05D000972 1.1e-06 57.8 203 29.6
Hma1.2p1_0945F.1_g240300 Hydrangea macrophylla HOM05D001131 ORTHO05D000972 3.2e-06 56.2 204 26.5


User provided reference genes

Program Settings