Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p59560 Brassica napus HOM05D010948 ORTHO05D013805 1.7e-163 579.3 300 100.0
A07p28660 Brassica napus HOM05D010948 ORTHO05D013805 2.6e-116 422.5 246 91.5
BolC9t55422H Brassica oleracea HOM05D010948 ORTHO05D013805 5.1e-104 381.7 232 87.1
BcaB01g05924 Brassica carinata HOM05D010948 ORTHO05D013805 2.2e-91 339.7 257 74.7
A01p00100 Brassica napus HOM05D010948 ORTHO05D013805 7.2e-66 255.0 195 72.8
BcaC04g20835 Brassica carinata HOM05D010948 ORTHO05D013805 3.0e-64 249.6 134 96.3
C09p38650 Brassica napus HOM05D010948 ORTHO05D013805 3.0e-64 249.6 134 96.3
BolC9t56721H Brassica oleracea HOM05D010948 ORTHO05D013805 3.0e-64 249.6 134 96.3
C03p25990 Brassica napus HOM05D010948 ORTHO05D013805 6.8e-64 248.4 221 64.3
C03p51770 Brassica napus HOM05D010948 ORTHO05D013805 2.8e-49 199.9 109 95.4
BcaC01g00510 Brassica carinata HOM05D010948 ORTHO05D039443 1.5e-47 194.1 221 54.3
C03p80810 Brassica napus HOM05D010948 ORTHO05D039443 2.2e-38 163.7 105 82.9
A03p11870 Brassica napus HOM05D010948 ORTHO05D013805 6.6e-27 125.6 111 66.7
BcaB07g31310 Brassica carinata HOM05D029219 ORTHO05D091766 1.6e-20 104.4 79 70.9
BraA02t06231Z Brassica rapa HOM05D011556 ORTHO05D014123 6.0e-20 102.4 203 37.9
C07p15790 Brassica napus HOM05D011556 ORTHO05D014123 3.9e-19 99.8 189 42.9
BcaC06g32745 Brassica carinata HOM05D009754 ORTHO05D020043 2.5e-18 97.1 168 45.8
C02p29070 Brassica napus HOM05D009754 ORTHO05D020043 2.5e-18 97.1 168 45.8
BraA08t34218Z Brassica rapa HOM05D010893 ORTHO05D016035 1.6e-17 94.4 184 43.5
A09p03830 Brassica napus HOM05D011556 ORTHO05D014123 6.2e-17 92.4 116 52.6
C08p35010 Brassica napus HOM05D009754 ORTHO05D033217 1.1e-16 91.7 151 45.0
BolC2t06272H Brassica oleracea HOM05D011556 ORTHO05D014123 2.4e-16 90.5 168 41.7
BraA08t34184Z Brassica rapa HOM05D009754 ORTHO05D020043 4.0e-16 89.7 168 43.5
C04p72720 Brassica napus HOM05D009754 ORTHO05D014123 5.3e-16 89.4 257 34.6
C08p42710 Brassica napus HOM05D011556 ORTHO05D014123 5.3e-16 89.4 179 41.9
C02p10230 Brassica napus HOM05D011556 ORTHO05D014123 6.9e-16 89.0 173 41.0
BolC2t10052H Brassica oleracea HOM05D011556 ORTHO05D014123 1.5e-15 87.8 100 56.0
C05p02990 Brassica napus HOM05D009754 ORTHO05D101014 2.0e-15 87.4 249 34.9
BcaB01g05158 Brassica carinata HOM05D010893 ORTHO05D016035 2.6e-15 87.0 128 47.7
BraA04t18895Z Brassica rapa HOM05D010893 ORTHO05D039094 2.6e-15 87.0 119 51.3
C08p49870 Brassica napus HOM05D011556 ORTHO05D041066 3.4e-15 86.7 159 42.8
BcaC07g38101 Brassica carinata HOM05D009754 ORTHO05D027209 4.5e-15 86.3 155 45.8
C02p63430 Brassica napus HOM05D014255 ORTHO05D015450 7.6e-15 85.5 129 48.1
BolC2t12410H Brassica oleracea HOM05D014255 ORTHO05D015450 7.6e-15 85.5 129 48.1
C07p10670 Brassica napus HOM05D009935 ORTHO05D012055 1.7e-14 84.3 84 60.7
C08p07080 Brassica napus HOM05D010893 ORTHO05D016035 1.7e-14 84.3 140 45.0
BolC8t47552H Brassica oleracea HOM05D010893 ORTHO05D016035 1.7e-14 84.3 140 45.0
BraA10t43860Z Brassica rapa HOM05D009754 ORTHO05D020043 1.7e-14 84.3 135 47.4
C03p09920 Brassica napus HOM05D010893 ORTHO05D016035 2.2e-14 84.0 120 49.2
BolC8t52515H Brassica oleracea HOM05D011556 ORTHO05D041066 2.2e-14 84.0 159 42.1
C03p32540 Brassica napus HOM05D014255 ORTHO05D015450 2.9e-14 83.6 129 48.1
C04p32520 Brassica napus HOM05D011556 ORTHO05D014123 6.4e-14 82.4 69 66.7
BcaB07g33645 Brassica carinata HOM05D010893 ORTHO05D014123 2.4e-13 80.5 151 41.7
C03p08410 Brassica napus HOM05D010948 ORTHO05D000169 4.2e-13 79.7 84 59.5
BcaC06g35412 Brassica carinata HOM05D010893 ORTHO05D016035 2.7e-12 77.0 121 47.1
BcaC04g18681 Brassica carinata HOM05D009754 ORTHO05D027209 4.6e-12 76.3 155 43.2
BcaC02g07870 Brassica carinata HOM05D010893 ORTHO05D016035 7.9e-12 75.5 160 41.9
C06p44540 Brassica napus HOM05D009754 ORTHO05D027209 2.3e-11 73.9 173 39.9
BcaB01g01362 Brassica carinata HOM05D009754 ORTHO05D020043 2.5e-10 70.5 167 38.9
C07p18370 Brassica napus HOM05D009754 ORTHO05D033217 3.3e-10 70.1 83 51.8
BcaB02g07535 Brassica carinata HOM05D019895 ORTHO05D019895 1.3e-09 68.2 96 49.0
BcaB05g23955 Brassica carinata HOM05D019895 ORTHO05D019895 1.3e-09 68.2 96 47.9
C08p03380 Brassica napus HOM05D008956 ORTHO05D016720 1.4e-08 64.7 223 34.1
BolC4t27983H Brassica oleracea HOM05D008956 ORTHO05D013254 1.4e-08 64.7 94 48.9
BcaC08g47238 Brassica carinata HOM05D010893 ORTHO05D032352 1.8e-08 64.3 221 34.8
BcaC08g46504 Brassica carinata HOM05D009754 ORTHO05D027209 4.0e-08 63.2 173 37.6
BolC3t12902H Brassica oleracea HOM05D008956 ORTHO05D013254 4.0e-08 63.2 185 38.9
A08p33410 Brassica napus HOM05D003240 ORTHO05D017535 6.9e-08 62.4 96 44.8
BolC4t25298H Brassica oleracea HOM05D009754 ORTHO05D020043 6.9e-08 62.4 97 47.4
C05p62330 Brassica napus HOM05D003240 ORTHO05D019895 1.2e-07 61.6 126 39.7
BcaB03g13577 Brassica carinata HOM05D017424 ORTHO05D032352 1.5e-07 61.2 203 36.0
C03p75630 Brassica napus HOM05D008956 ORTHO05D013254 2.0e-07 60.8 238 33.2
BcaC07g39633 Brassica carinata HOM05D017424 ORTHO05D039094 2.6e-07 60.5 118 42.4
C03p51870 Brassica napus HOM05D012445 ORTHO05D018631 3.4e-07 60.1 212 34.4
BolC1t00874H Brassica oleracea HOM05D003240 ORTHO05D023867 4.5e-07 59.7 96 43.8
BraA03t12219Z Brassica rapa HOM05D003240 ORTHO05D017535 4.5e-07 59.7 162 33.3
BraA09t36164Z Brassica rapa HOM05D012445 ORTHO05D018631 4.5e-07 59.7 213 31.9
BraA03t13996Z Brassica rapa HOM05D012445 ORTHO05D018631 7.6e-07 58.9 214 32.2
BcaC06g31611 Brassica carinata HOM05D003240 ORTHO05D091789 9.9e-07 58.5 119 39.5
BraA04t17515Z Brassica rapa HOM05D012445 ORTHO05D018631 1.3e-06 58.2 132 38.6
BolC6t39347H Brassica oleracea HOM05D012445 ORTHO05D041381 1.7e-06 57.8 164 36.6
BraA02t06360Z Brassica rapa HOM05D008956 ORTHO05D013254 1.7e-06 57.8 238 33.2
A10p20120 Brassica napus HOM05D003240 ORTHO05D032928 2.2e-06 57.4 292 31.5
C06p40860 Brassica napus HOM05D012445 ORTHO05D041381 2.2e-06 57.4 164 36.6
BolC6t36746H Brassica oleracea HOM05D012445 ORTHO05D040835 2.2e-06 57.4 170 35.9
BraA03t14966Z Brassica rapa HOM05D008956 ORTHO05D016720 2.2e-06 57.4 97 46.4
BcaB07g31032 Brassica carinata HOM05D003240 ORTHO05D019895 2.9e-06 57.0 96 43.8
C03p03630 Brassica napus HOM05D008956 ORTHO05D013254 2.9e-06 57.0 185 37.8
BcaC06g35455 Brassica carinata HOM05D012417 ORTHO05D024193 4.9e-06 56.2 94 40.4
C09p16440 Brassica napus HOM05D012445 ORTHO05D040835 4.9e-06 56.2 170 36.5
BraA06t23408Z Brassica rapa HOM05D001897 ORTHO05D001953 4.9e-06 56.2 109 40.4
BolC8t49585H Brassica oleracea HOM05D003240 ORTHO05D024027 6.4e-06 55.8 100 42.0


User provided reference genes

Program Settings