Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p59420 Brassica napus HOM05D006945 ORTHO05D005549 3.1e-74 281.6 128 100.0
A03p59240 Brassica napus HOM05D006945 ORTHO05D005549 4.4e-73 277.7 128 97.7
BraA03t14998Z Brassica rapa HOM05D006945 ORTHO05D005549 1.7e-72 275.8 128 97.7
BolC6t36787H Brassica oleracea HOM05D006945 ORTHO05D005549 4.8e-67 257.7 128 90.6
BcaC08g44188 Brassica carinata HOM05D006945 ORTHO05D005549 1.5e-65 252.7 130 89.2
C07p57440 Brassica napus HOM05D006945 ORTHO05D005549 1.0e-61 240.0 131 85.5
BolC7t46212H Brassica oleracea HOM05D006945 ORTHO05D005549 5.1e-61 237.7 131 84.7
C06p15950 Brassica napus HOM05D006945 ORTHO05D005549 1.2e-54 216.5 101 90.1
BcaNung00513 Brassica carinata HOM05D006945 ORTHO05D005549 1.0e-48 196.8 110 74.5
BcaNung00514 Brassica carinata HOM05D006945 ORTHO05D005549 1.0e-48 196.8 110 74.5
Thhalv10026566m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 6.7e-45 184.1 128 62.5
BcaNung02066 Brassica carinata HOM05D006945 ORTHO05D005549 4.3e-44 181.4 130 64.6
BcaNung02068 Brassica carinata HOM05D006945 ORTHO05D005549 4.3e-44 181.4 130 64.6
C07p62500 Brassica napus HOM05D006945 ORTHO05D005549 4.1e-42 174.9 136 62.5
BcaNung02932 Brassica carinata HOM05D006945 ORTHO05D005549 9.0e-42 173.7 130 60.8
BolC7t46664H Brassica oleracea HOM05D006945 ORTHO05D005549 1.5e-41 172.9 137 61.3
CARHR237970 Cardamine hirsuta HOM05D006945 ORTHO05D005549 2.6e-41 172.2 129 56.6
AL7G22140 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 2.2e-40 169.1 128 57.8
AT4G30070 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 2.5e-39 165.6 130 56.9
Carub.0007s1055 Capsella rubella HOM05D006945 ORTHO05D005549 7.9e-38 160.6 134 56.0
Sp7g27870 Schrenkiella parvula HOM05D006945 ORTHO05D005549 2.2e-35 152.5 128 53.9
Carub.0004s0716 Capsella rubella HOM05D006945 ORTHO05D005549 8.2e-35 150.6 132 53.0
Sp5g15500 Schrenkiella parvula HOM05D006945 ORTHO05D005549 2.4e-34 149.1 132 51.5
AT5G38330 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 6.9e-34 147.5 128 55.5
Carub.0007s1058 Capsella rubella HOM05D006945 ORTHO05D005549 2.6e-33 145.6 134 50.0
A03p65360 Brassica napus HOM05D006945 ORTHO05D005549 1.3e-32 143.3 110 61.8
Sp7g27850 Schrenkiella parvula HOM05D006945 ORTHO05D005549 2.2e-32 142.5 121 52.1
AL7G52460 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 1.1e-31 140.2 148 46.6
BraA03t15590Z Brassica rapa HOM05D006945 ORTHO05D005549 2.3e-29 132.5 124 53.2
A07p12270 Brassica napus HOM05D006945 ORTHO05D005549 2.0e-28 129.4 113 45.1
A07p12290 Brassica napus HOM05D006945 ORTHO05D005549 2.0e-28 129.4 113 45.1
BraA07t29011Z Brassica rapa HOM05D006945 ORTHO05D005549 2.0e-28 129.4 113 45.1
Carub.0005s0829 Capsella rubella HOM05D006945 ORTHO05D005549 2.6e-28 129.0 128 43.8
A08p19430 Brassica napus HOM05D006945 ORTHO05D005549 4.4e-28 128.3 131 43.5
BraA08t33905Z Brassica rapa HOM05D006945 ORTHO05D005549 4.4e-28 128.3 131 43.5
A03p59250 Brassica napus HOM05D006945 ORTHO05D005549 9.7e-28 127.1 130 46.2
BraA03t14982Z Brassica rapa HOM05D006945 ORTHO05D005549 9.7e-28 127.1 130 46.2
BcaB03g12631 Brassica carinata HOM05D006945 ORTHO05D005549 1.3e-27 126.7 134 43.3
BcaC02g10382 Brassica carinata HOM05D006945 ORTHO05D005549 2.2e-27 125.9 131 42.7
AT4G30074 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 2.8e-27 125.6 129 43.4
Sp7g27890 Schrenkiella parvula HOM05D006945 ORTHO05D005549 1.1e-26 123.6 129 42.6
A03p59430 Brassica napus HOM05D006945 ORTHO05D005549 1.4e-26 123.2 130 43.8
Carub.0004s0306 Capsella rubella HOM05D006945 ORTHO05D005549 1.8e-26 122.9 129 49.6
BraA03t14999Z Brassica rapa HOM05D006945 ORTHO05D005549 3.1e-26 122.1 130 43.8
Carub.0008s0696 Capsella rubella HOM05D006945 ORTHO05D005549 5.3e-26 121.3 129 46.5
C07p57450 Brassica napus HOM05D006945 ORTHO05D005549 7.0e-26 120.9 130 43.8
BolC7t46213H Brassica oleracea HOM05D006945 ORTHO05D005549 7.0e-26 120.9 130 43.8
Thhalv10000699m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 7.0e-26 120.9 111 48.6
AL8G19370 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 1.5e-25 119.8 129 47.3
BcaNung00515 Brassica carinata HOM05D006945 ORTHO05D005549 1.5e-25 119.8 111 49.5
AT5G38317 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 2.0e-25 119.4 128 45.3
Thhalv10027387m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 2.0e-25 119.4 130 42.3
C06p15940 Brassica napus HOM05D006945 ORTHO05D005549 2.6e-25 119.0 130 43.1
C07p58660 Brassica napus HOM05D006945 ORTHO05D005549 2.6e-25 119.0 130 43.1
BolC6t36786H Brassica oleracea HOM05D006945 ORTHO05D005549 2.6e-25 119.0 130 43.1
BolC7t46316H Brassica oleracea HOM05D006945 ORTHO05D005549 2.6e-25 119.0 130 43.1
BcaC02g10381 Brassica carinata HOM05D006945 ORTHO05D005549 7.7e-25 117.5 131 43.5
BcaC02g10365 Brassica carinata HOM05D006945 ORTHO05D005549 1.3e-24 116.7 109 43.1
C04p29510 Brassica napus HOM05D006945 ORTHO05D005549 1.3e-24 116.7 109 43.1
A03p60770 Brassica napus HOM05D006945 ORTHO05D005549 2.2e-24 115.9 130 42.3
Sp7g27900 Schrenkiella parvula HOM05D006945 ORTHO05D005549 2.9e-24 115.5 112 45.5
AL7G22130 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 6.5e-24 114.4 122 41.8
CARHR214260 Cardamine hirsuta HOM05D006945 ORTHO05D005549 1.5e-23 113.2 98 58.2
Thhalv10026848m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 2.7e-22 109.0 128 42.2
BolC4t24502H Brassica oleracea HOM05D006945 ORTHO05D005549 1.0e-21 107.1 109 40.4
AT5G42242 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 1.4e-21 106.7 129 42.6
BcaB03g12630 Brassica carinata HOM05D006945 ORTHO05D005549 1.1e-20 103.6 103 40.8
PGR044G0988 Punica granatum HOM05D006945 ORTHO05D005549 3.3e-20 102.1 129 39.5
Thhalv10026783m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 4.4e-20 101.7 128 39.8
Rhsim13G0155500 Rhododendron simsii HOM05D006945 ORTHO05D005549 4.4e-20 101.7 135 39.3
Glyma.15G164400 Glycine max HOM05D006945 ORTHO05D005549 5.7e-20 101.3 124 38.7
Carub.0007s1053 Capsella rubella HOM05D006945 ORTHO05D005549 7.4e-20 100.9 129 38.0
A08p19440 Brassica napus HOM05D006945 ORTHO05D005549 9.7e-20 100.5 128 37.5
BraA08t33906Z Brassica rapa HOM05D006945 ORTHO05D005549 9.7e-20 100.5 128 37.5
Carub.0007s3775 Capsella rubella HOM05D006945 ORTHO05D005549 2.2e-19 99.4 124 41.1
C03p88930 Brassica napus HOM05D006945 ORTHO05D005549 3.7e-19 98.6 128 36.7
BraA03t14997Z Brassica rapa HOM05D006945 ORTHO05D005549 3.7e-19 98.6 128 43.0
A03p59410 Brassica napus HOM05D006945 ORTHO05D005549 8.2e-19 97.4 128 42.2
Cpa.g.sc95.22 Carica papaya HOM05D006945 ORTHO05D005549 1.8e-18 96.3 107 42.1
C07p57430 Brassica napus HOM05D006945 ORTHO05D005549 2.4e-18 95.9 128 42.2
Sp7g27880 Schrenkiella parvula HOM05D006945 ORTHO05D005549 2.0e-17 92.8 99 43.4
CARHR237980 Cardamine hirsuta HOM05D006945 ORTHO05D005549 2.9e-16 89.0 102 38.2
Lj2g0024644 Lotus japonicus HOM05D006945 ORTHO05D005549 3.8e-16 88.6 124 34.7
BolC3t21204H Brassica oleracea HOM05D006945 ORTHO05D005549 5.0e-16 88.2 130 34.6
Lj6g0015237 Lotus japonicus HOM05D006945 ORTHO05D005549 5.0e-16 88.2 124 35.5
FvH4_4g06580 Fragaria vesca HOM05D006945 ORTHO05D005549 1.5e-15 86.7 130 39.2
FAN17G1318 Fragaria x ananassa HOM05D006945 ORTHO05D005549 1.5e-15 86.7 129 38.0
MD12G1050000 Malus domestica HOM05D009688 ORTHO05D005549 1.5e-12 76.6 128 32.0
Prupe.1G080000 Prunus persica HOM05D009688 ORTHO05D005549 1.5e-12 76.6 128 32.0
CARHR237960 Cardamine hirsuta HOM05D006945 ORTHO05D005549 3.4e-12 75.5 128 34.4
Rhsim13G0155400 Rhododendron simsii HOM05D006945 ORTHO05D005549 4.4e-12 75.1 132 28.8
Duzib168G0317 Durio zibethinus HOM05D009688 ORTHO05D005549 7.5e-12 74.3 112 33.0
Cpa.g.sc95.33 Carica papaya HOM05D009688 ORTHO05D005549 2.8e-11 72.4 109 40.4
AL7G22170 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 1.8e-10 69.7 48 52.1
Ah.05g178690 Amaranthus hybridus HOM05D006945 ORTHO05D005549 2.4e-10 69.3 94 37.2
TPR.G30224 Trifolium pratense HOM05D006945 ORTHO05D005549 2.4e-10 69.3 108 32.4
Gohir.D08G029125 Gossypium hirsutum HOM05D009688 ORTHO05D005549 5.4e-10 68.2 139 33.1
Gohir.D08G029000 Gossypium hirsutum HOM05D009688 ORTHO05D005549 2.7e-09 65.9 129 34.1
Gorai.004G026100 Gossypium raimondii HOM05D009688 ORTHO05D005549 2.7e-09 65.9 129 34.1
Gorai.004G026300 Gossypium raimondii HOM05D009688 ORTHO05D005549 2.7e-09 65.9 128 33.6
Gohir.A08G018400 Gossypium hirsutum HOM05D009688 ORTHO05D005549 1.7e-08 63.2 129 32.6
Gorai.004G026200 Gossypium raimondii HOM05D009688 ORTHO05D005549 8.5e-08 60.8 139 28.8
Gohir.D08G029100 Gossypium hirsutum HOM05D009688 ORTHO05D005549 1.1e-07 60.5 139 29.5
Gohir.A08G018500 Gossypium hirsutum HOM05D009688 ORTHO05D005549 4.2e-07 58.5 139 28.8
Gorai.004G026400 Gossypium raimondii HOM05D009688 ORTHO05D005549 4.2e-07 58.5 143 30.8


User provided reference genes

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