Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p59300 Brassica napus HOM05D003453 ORTHO05D004154 4.2e-140 501.9 367 100.0
BraA03t14987Z Brassica rapa HOM05D003453 ORTHO05D004154 2.1e-139 499.6 367 99.7
BolC7t46200H Brassica oleracea HOM05D003453 ORTHO05D004154 7.6e-118 427.9 367 89.9
C07p57310 Brassica napus HOM05D003453 ORTHO05D004154 1.7e-117 426.8 367 89.6
Carub.0004s1475 Capsella rubella HOM05D003453 ORTHO05D004154 9.7e-105 384.4 372 80.4
BcaNung00498 Brassica carinata HOM05D003453 ORTHO05D004154 4.5e-102 375.6 375 81.9
Thhalv10027502m.g Eutrema salsugineum HOM05D003453 ORTHO05D004154 9.4e-100 367.9 374 77.8
Sp7g27690 Schrenkiella parvula HOM05D003453 ORTHO05D004154 2.6e-97 359.8 368 83.4
AL7G22370 Arabidopsis lyrata HOM05D003453 ORTHO05D004154 8.5e-93 344.7 370 74.9
AT4G29880 Arabidopsis thaliana HOM05D003453 ORTHO05D004154 8.5e-93 344.7 374 73.8
CARHR237770 Cardamine hirsuta HOM05D003453 ORTHO05D004154 5.7e-89 332.0 368 75.8
AL3G48980 Arabidopsis lyrata HOM05D003453 ORTHO05D004154 9.4e-84 314.7 379 69.9
Thhalv10022960m.g Eutrema salsugineum HOM05D003453 ORTHO05D004154 3.6e-83 312.8 384 69.3
AT2G19330 Arabidopsis thaliana HOM05D003453 ORTHO05D004154 7.5e-81 305.1 382 68.8
Sp3g32700 Schrenkiella parvula HOM05D003453 ORTHO05D004154 2.7e-78 296.6 385 67.0
A07p01420 Brassica napus HOM05D003453 ORTHO05D004154 7.7e-78 295.0 385 65.7
C07p02870 Brassica napus HOM05D003453 ORTHO05D004154 7.7e-78 295.0 385 65.7
BolC7t40684H Brassica oleracea HOM05D003453 ORTHO05D004154 7.7e-78 295.0 385 65.7
BraA07t27936Z Brassica rapa HOM05D003453 ORTHO05D004154 7.7e-78 295.0 385 65.7
CARHR109780 Cardamine hirsuta HOM05D003453 ORTHO05D004154 1.9e-76 290.4 384 65.9
Carub.0003s3355 Capsella rubella HOM05D003453 ORTHO05D004154 5.2e-74 282.3 391 64.7
BcaB03g16722 Brassica carinata HOM05D003453 ORTHO05D004154 2.8e-72 276.6 324 71.6
FAN12G0296 Fragaria x ananassa HOM05D003453 ORTHO05D004154 3.7e-72 276.2 325 70.2
FAN22G1784 Fragaria x ananassa HOM05D003453 ORTHO05D004154 1.4e-71 274.2 325 70.5
RcHm_v2.0_Chr4g0398811 Rosa chinensis HOM05D003453 ORTHO05D004154 3.2e-68 263.1 325 71.7
THA.LOC104814639 Tarenaya hassleriana HOM05D003453 ORTHO05D004154 1.6e-67 260.8 373 65.1
FvH4_4g06910 Fragaria vesca HOM05D003453 ORTHO05D004154 4.7e-67 259.2 325 71.1
FAN17G0675 Fragaria x ananassa HOM05D003453 ORTHO05D004154 4.7e-67 259.2 325 70.8
Aa31LG8G16370 Aethionema arabicum HOM05D003453 ORTHO05D004154 6.1e-67 258.8 400 61.8
PGR044G1644 Punica granatum HOM05D003453 ORTHO05D004154 6.1e-67 258.8 324 72.8
FAN07G0750 Fragaria x ananassa HOM05D003453 ORTHO05D004154 8.0e-67 258.5 324 70.7
MD13G1241200 Malus domestica HOM05D003453 ORTHO05D004154 1.2e-62 244.6 324 68.2
Medtr4g127120 Medicago truncatula HOM05D003453 ORTHO05D004154 1.2e-62 244.6 352 69.3
Haze_22047 Corylus avellana HOM05D003453 ORTHO05D004154 2.7e-62 243.4 331 57.4
TWI32G0581 Tripterygium wilfordii HOM05D003453 ORTHO05D004154 1.0e-61 241.5 325 73.5
TWI34G1803 Tripterygium wilfordii HOM05D003453 ORTHO05D004154 1.3e-61 241.1 328 72.6
Oeu035455.1 Olea europaea HOM05D003453 ORTHO05D004154 1.7e-61 240.7 324 67.6
MD16G1245200 Malus domestica HOM05D003453 ORTHO05D004154 3.8e-61 239.6 325 67.7
Thecc.09G192200 Theobroma cacao HOM05D003453 ORTHO05D004154 1.9e-60 237.3 323 68.4
Oeu043899.1 Olea europaea HOM05D003453 ORTHO05D004154 3.3e-60 236.5 326 66.0
Atru.chr7.914 Acer truncatum HOM05D003453 ORTHO05D004154 1.2e-59 234.6 350 64.3
Migut.J00777 Erythranthe guttata HOM05D003453 ORTHO05D004154 1.2e-59 234.6 324 67.9
Actinidia38507 Actinidia chinensis HOM05D003453 ORTHO05D004154 1.6e-59 234.2 316 69.9
TAR625G0633 Trochodendron aralioides HOM05D003453 ORTHO05D004154 2.1e-59 233.8 324 70.4
Prupe.1G072100 Prunus persica HOM05D003453 ORTHO05D004154 2.8e-59 233.4 324 66.0
Cpa.g.sc115.61 Carica papaya HOM05D003453 ORTHO05D004154 6.1e-59 232.3 325 68.3
CSS0013411 Camellia sinensis var. sinensis HOM05D003453 ORTHO05D004154 8.0e-59 231.9 326 67.2
CSS0032765 Camellia sinensis var. sinensis HOM05D003453 ORTHO05D004154 8.0e-59 231.9 326 67.2
Lj4g0007200 Lotus japonicus HOM05D003453 ORTHO05D004154 5.2e-58 229.2 341 69.8
Duzib168G0040 Durio zibethinus HOM05D003453 ORTHO05D004154 1.2e-57 228.0 325 64.3
Phvul.003G139800 Phaseolus vulgaris HOM05D003453 ORTHO05D004154 1.5e-57 227.6 346 68.5
COL.COLO4_37566 Corchorus olitorius HOM05D003453 ORTHO05D004154 3.4e-57 226.5 332 65.7
VMungo1215G2556 Vigna mungo HOM05D003453 ORTHO05D004154 3.4e-57 226.5 344 66.3
Nn8g40645 Nelumbo nucifera HOM05D003453 ORTHO05D004154 7.5e-57 225.3 324 60.8
Psat4g014280 Pisum sativum HOM05D003453 ORTHO05D004154 9.8e-57 224.9 345 53.0
Duzib150G0655 Durio zibethinus HOM05D003453 ORTHO05D004154 1.4e-55 221.1 325 64.9
Ciclev10008785m.g Citrus clementina HOM05D003453 ORTHO05D004154 1.8e-55 220.7 328 64.3
GSVIVG01029273001 Vitis vinifera HOM05D003453 ORTHO05D004154 7.0e-55 218.8 312 71.5
EL10Ac8g19292 Beta vulgaris HOM05D003453 ORTHO05D004154 9.2e-55 218.4 331 65.0
Oeu044656.1 Olea europaea HOM05D003453 ORTHO05D004154 9.2e-55 218.4 330 65.8
Glyma.17G057600 Glycine max HOM05D003453 ORTHO05D004154 1.2e-54 218.0 329 69.6
Cc06_g17230 Coffea canephora HOM05D003453 ORTHO05D004154 2.7e-54 216.9 312 64.4
SalBow3G1932 Salvia bowleyana HOM05D003453 ORTHO05D004154 7.8e-54 215.3 350 66.0
Sed0020380 Sechium edule HOM05D003453 ORTHO05D004154 1.0e-53 214.9 318 70.1
Gohir.A13G182300 Gossypium hirsutum HOM05D003453 ORTHO05D004154 1.7e-53 214.2 325 68.0
CsaV3_1G032040 Cucumis sativus L. HOM05D003453 ORTHO05D004154 2.3e-53 213.8 344 66.0
Gorai.013G211100 Gossypium raimondii HOM05D003453 ORTHO05D004154 5.0e-53 212.6 324 68.8
ClCG06G013840 Citrullus lanatus HOM05D003453 ORTHO05D004154 1.1e-52 211.5 289 74.7
Ca_21264_v3 Cicer arietinum L. HOM05D003453 ORTHO05D004154 1.5e-52 211.1 361 60.1
Gorai.012G008100 Gossypium raimondii HOM05D003453 ORTHO05D004154 1.5e-52 211.1 324 59.3
Lalb_Chr13g0299841 Lupinus albus HOM05D003453 ORTHO05D004154 1.5e-52 211.1 361 59.3
Manes.14G161200 Manihot esculenta HOM05D003453 ORTHO05D004154 2.5e-52 210.3 363 64.5
Hund24523 Selenicereus undatus HOM05D003453 ORTHO05D004154 2.5e-52 210.3 304 68.4
CiPaw.08G031400 Carya illinoinensis HOM05D003453 ORTHO05D004154 3.3e-52 209.9 327 62.4
Lalb_Chr07g0180741 Lupinus albus HOM05D003453 ORTHO05D004154 3.3e-52 209.9 349 61.3
Sc08g0004730 Simmondsia chinensis HOM05D003453 ORTHO05D004154 4.3e-52 209.5 377 49.1
DCAR_009479 Daucus carota HOM05D003453 ORTHO05D004154 7.3e-52 208.8 343 64.1
Gohir.D04G006700 Gossypium hirsutum HOM05D003453 ORTHO05D004154 7.3e-52 208.8 324 63.3
arahy.Tifrunner.gnm1.ann1.JP7J3T Arachis hypogaea HOM05D003453 ORTHO05D004154 2.8e-51 206.8 358 53.6
C07p54660 Brassica napus HOM05D003453 ORTHO05D004154 4.7e-51 206.1 332 60.5
BolC7t45955H Brassica oleracea HOM05D003453 ORTHO05D004154 4.7e-51 206.1 332 60.5
ClCG11G011550 Citrullus lanatus HOM05D003453 ORTHO05D004154 4.7e-51 206.1 329 68.1
Ah.09g228510 Amaranthus hybridus HOM05D003453 ORTHO05D004154 1.8e-50 204.1 319 65.5
Aqoxy7G02898 Aquilegia oxysepala HOM05D003453 ORTHO05D004154 3.4e-49 199.9 323 67.2
Dinv25469 Davidia involucrata HOM05D003453 ORTHO05D004154 3.4e-49 199.9 324 65.4
Potri.006G072700 Populus trichocarpa HOM05D003453 ORTHO05D004154 9.8e-49 198.4 344 64.0
Hma1.2p1_0235F.1_g098820 Hydrangea macrophylla HOM05D003453 ORTHO05D004154 1.7e-48 197.6 280 70.0
Sabra06G0054100 Salix brachista HOM05D003453 ORTHO05D004154 1.7e-48 197.6 369 61.2
Eucgr.C02218 Eucalyptus grandis HOM05D003453 ORTHO05D004154 2.2e-48 197.2 325 66.8
TPR.G5414 Trifolium pratense HOM05D003453 ORTHO05D004154 2.2e-48 197.2 354 55.9
Gohir.A05G408700 Gossypium hirsutum HOM05D003453 ORTHO05D004154 8.3e-48 195.3 343 59.2
DCAR_020142 Daucus carota HOM05D003453 ORTHO05D004154 1.4e-47 194.5 335 59.4
PSO063G7373 Papaver somniferum HOM05D003453 ORTHO05D004154 1.9e-47 194.1 328 68.3
CANSAT11G2669 Cannabis sativa HOM05D003453 ORTHO05D004154 4.1e-47 193.0 336 65.8
CDE05G1169 Ceratophyllum demersum HOM05D003453 ORTHO05D004154 4.1e-47 193.0 324 54.3
SGA_v2.0_scaffold31G12781 Striga asiatica HOM05D003453 ORTHO05D004154 4.1e-47 193.0 362 57.5
BcaC06g36564 Brassica carinata HOM05D003453 ORTHO05D004154 9.2e-47 191.8 312 64.1
CsaV3_2G008970 Cucumis sativus L. HOM05D003453 ORTHO05D004154 4.6e-46 189.5 328 64.3
Lj6g0025589 Lotus japonicus HOM05D003453 ORTHO05D004154 7.8e-46 188.7 316 60.8
Duzib170G0719 Durio zibethinus HOM05D003453 ORTHO05D004154 2.3e-45 187.2 326 64.4
Eucgr.C00085 Eucalyptus grandis HOM05D003453 ORTHO05D004154 2.3e-45 187.2 305 61.0
CDE05G3189 Ceratophyllum demersum HOM05D003453 ORTHO05D004154 6.6e-45 185.7 324 61.1
Thhalv10025419m.g Eutrema salsugineum HOM05D003453 ORTHO05D004154 6.6e-45 185.7 328 65.2
Potri.018G139700 Populus trichocarpa HOM05D003453 ORTHO05D004154 6.6e-45 185.7 335 62.4
Eucgr.C00084 Eucalyptus grandis HOM05D003453 ORTHO05D004154 1.5e-44 184.5 306 66.3
Manes.06G017500 Manihot esculenta HOM05D003453 ORTHO05D004154 1.9e-44 184.1 353 63.7
PSO170G1153 Papaver somniferum HOM05D003453 ORTHO05D004154 2.5e-44 183.7 322 66.5
Carub.0007s1491 Capsella rubella HOM05D003453 ORTHO05D004154 9.5e-44 181.8 331 62.2
Peaxi162Scf00006g02914 Petunia axillaris HOM05D003453 ORTHO05D004154 2.8e-43 180.3 327 66.1
SHI03070 Sapria himalayana HOM05D003453 ORTHO05D004154 4.7e-43 179.5 351 49.3
A03p56450 Brassica napus HOM05D003453 ORTHO05D004154 8.1e-43 178.7 339 60.8
BraA03t14715Z Brassica rapa HOM05D003453 ORTHO05D004154 1.8e-42 177.6 343 50.4
TPR.G2523 Trifolium pratense HOM05D003453 ORTHO05D004154 1.8e-42 177.6 352 60.8
BcaC06g32772 Brassica carinata HOM05D003453 ORTHO05D004154 2.3e-42 177.2 332 63.3
Glyma.09G061500 Glycine max HOM05D003453 ORTHO05D004154 2.3e-42 177.2 356 58.1
CARHR233550 Cardamine hirsuta HOM05D003453 ORTHO05D004154 5.2e-42 176.0 329 63.5
AT4G26050 Arabidopsis thaliana HOM05D003453 ORTHO05D004154 6.8e-42 175.6 342 61.4
CDE02G3632 Ceratophyllum demersum HOM05D003453 ORTHO05D004154 6.8e-42 175.6 323 54.5
PSO063G4618 Papaver somniferum HOM05D003453 ORTHO05D004154 6.8e-42 175.6 322 65.8
VMungo1309G3166 Vigna mungo HOM05D003453 ORTHO05D004154 2.0e-41 174.1 322 64.9
arahy.Tifrunner.gnm1.ann1.SX1TLQ Arachis hypogaea HOM05D003453 ORTHO05D004154 1.3e-40 171.4 329 55.6
Sabra18G0114200 Salix brachista HOM05D003453 ORTHO05D004154 2.2e-40 170.6 325 59.4
AL7G26940 Arabidopsis lyrata HOM05D003453 ORTHO05D004154 3.7e-40 169.9 328 62.2
Aa31LG2G20670 Aethionema arabicum HOM05D003453 ORTHO05D004154 1.1e-39 168.3 163 68.1
Glyma.15G167800 Glycine max HOM05D003453 ORTHO05D004154 1.1e-39 168.3 364 55.8
Sed0024940 Sechium edule HOM05D003453 ORTHO05D004154 1.4e-39 167.9 320 62.2
Phvul.009G234500 Phaseolus vulgaris HOM05D003453 ORTHO05D004154 1.9e-39 167.5 323 59.8
Lalb_Chr23g0276711 Lupinus albus HOM05D003453 ORTHO05D004154 2.4e-39 167.2 321 56.7
Medtr2g038380 Medicago truncatula HOM05D003453 ORTHO05D004154 5.4e-39 166.0 359 59.6
Psat1g142440 Pisum sativum HOM05D003453 ORTHO05D004154 9.2e-39 165.2 359 58.8
A01p17310 Brassica napus HOM05D003453 ORTHO05D004154 2.7e-38 163.7 339 60.2
BraA01t01686Z Brassica rapa HOM05D003453 ORTHO05D004154 2.7e-38 163.7 339 60.2
BolC1t02107H Brassica oleracea HOM05D003453 ORTHO05D004154 3.5e-38 163.3 307 65.1
MELO3C003949.2 Cucumis melo HOM05D003453 ORTHO05D004154 4.6e-38 162.9 328 61.3
Aa31LG3G390 Aethionema arabicum HOM05D003453 ORTHO05D004154 6.0e-38 162.5 335 52.8
C01p21810 Brassica napus HOM05D003453 ORTHO05D004154 6.0e-38 162.5 307 64.2
HanXRQChr05g0142141 Helianthus annuus HOM05D003453 ORTHO05D004154 1.0e-37 161.8 343 57.1
MBI16_g09350_MAGBIO Magnolia biondii HOM05D003453 ORTHO05D004154 1.3e-37 161.4 324 56.2
DCAR_018009 Daucus carota HOM05D003453 ORTHO05D004154 3.0e-37 160.2 369 54.5
Gohir.D13G185000 Gossypium hirsutum HOM05D003453 ORTHO05D004154 3.0e-37 160.2 264 72.7
HanXRQChr09g0245371 Helianthus annuus HOM05D003453 ORTHO05D004154 3.0e-37 160.2 353 59.8
Psat1g142960 Pisum sativum HOM05D003453 ORTHO05D004154 3.9e-37 159.8 358 58.7
arahy.Tifrunner.gnm1.ann1.N816GG Arachis hypogaea HOM05D003453 ORTHO05D004154 9.5e-36 155.2 295 59.3
CiPaw.07G199200 Carya illinoinensis HOM05D003453 ORTHO05D004154 9.5e-36 155.2 285 59.6
THA.LOC104817769 Tarenaya hassleriana HOM05D003453 ORTHO05D004154 1.2e-35 154.8 336 55.7
arahy.Tifrunner.gnm1.ann1.3E2B2N Arachis hypogaea HOM05D003453 ORTHO05D004154 2.1e-35 154.1 295 59.3
Solyc12g017480.3 Solanum lycopersicum HOM05D003453 ORTHO05D004154 2.8e-35 153.7 318 62.3
Sopen12g008270 Solanum pennellii HOM05D003453 ORTHO05D004154 2.8e-35 153.7 318 62.3
ECA240G3569 Erigeron canadensis HOM05D003453 ORTHO05D004154 6.2e-35 152.5 348 61.5
QL02p064658 Quercus lobata HOM05D003453 ORTHO05D004154 6.2e-35 152.5 328 56.7
unitig_578.g15728 Utricularia gibba HOM05D003453 ORTHO05D004154 1.8e-34 151.0 355 47.6
Nitab4.5_0001335g0020 Nicotiana tabacum HOM05D003453 ORTHO05D004154 2.6e-33 147.1 327 49.2
Rhsim02G0202600 Rhododendron simsii HOM05D003453 ORTHO05D004154 5.8e-33 146.0 323 62.8
PGSC0003DMG400006458 Solanum tuberosum HOM05D003453 ORTHO05D004154 1.7e-32 144.4 318 61.6
AUR62027430 Chenopodium quinoa HOM05D003453 ORTHO05D004154 8.4e-32 142.1 322 44.1
Os04g0605300 Oryza sativa ssp. japonica HOM05D003453 ORTHO05D004154 1.1e-31 141.7 322 58.7
Lsat_1_v5_gn_8_68380 Lactuca sativa HOM05D003453 ORTHO05D004154 2.4e-31 140.6 368 56.5
ATR0580G242 Amborella trichopoda HOM05D003453 ORTHO05D004154 4.1e-31 139.8 324 60.8
Oeu012385.1 Olea europaea HOM05D003453 ORTHO05D004154 1.6e-30 137.9 311 38.9
Actinidia29965 Actinidia chinensis HOM05D003453 ORTHO05D004154 2.7e-30 137.1 162 58.0
Rhsim03G0267900 Rhododendron simsii HOM05D003453 ORTHO05D004154 2.7e-30 137.1 307 62.2
Lju50A41T23 Lonicera japonica HOM05D003453 ORTHO05D004154 1.7e-29 134.4 255 54.5
Lju50A42T20 Lonicera japonica HOM05D003453 ORTHO05D004154 1.7e-29 134.4 255 54.5
Lsat_1_v5_gn_7_55120 Lactuca sativa HOM05D003453 ORTHO05D004154 3.0e-29 133.7 355 55.2
Zm00001eb071570 Zea mays HOM05D003453 ORTHO05D004154 8.7e-29 132.1 329 56.2
Lju432C7T0 Lonicera japonica HOM05D003453 ORTHO05D004154 1.9e-28 131.0 255 54.1
HanXRQChr04g0103791 Helianthus annuus HOM05D003453 ORTHO05D004154 4.3e-28 129.8 348 55.5
Sed0001635 Sechium edule HOM05D003453 ORTHO05D004154 5.6e-28 129.4 286 48.3
PGR018G0002 Punica granatum HOM05D003453 ORTHO05D004154 2.8e-27 127.1 323 56.3
PGR142G3132 Punica granatum HOM05D003453 ORTHO05D004154 2.8e-27 127.1 323 56.3
PGR142G4131 Punica granatum HOM05D003453 ORTHO05D004154 2.8e-27 127.1 323 56.3
MSTRG.19360 Avicennia marina HOM05D003453 ORTHO05D004154 2.2e-24 117.5 209 63.6
vmacro22287 Vaccinium macrocarpon HOM05D003453 ORTHO05D004154 8.4e-24 115.5 210 60.0
ECA236G3452 Erigeron canadensis HOM05D003453 ORTHO05D004154 1.9e-23 114.4 260 64.2
Ca_02128_v3 Cicer arietinum L. HOM05D003453 ORTHO05D004154 4.2e-23 113.2 318 50.9
MBI14_g10728_MAGBIO Magnolia biondii HOM05D003453 ORTHO05D004154 7.1e-23 112.5 212 54.2
SHI33663 Sapria himalayana HOM05D003453 ORTHO05D004154 9.3e-23 112.1 206 56.3
SpUn0235_0010 Schrenkiella parvula HOM05D003453 ORTHO05D004154 9.3e-23 112.1 247 68.0
Actinidia29966 Actinidia chinensis HOM05D003453 ORTHO05D004154 2.1e-22 110.9 79 68.4
AUR62031265 Chenopodium quinoa HOM05D003453 ORTHO05D004154 6.0e-22 109.4 217 50.7
CDE04G2437 Ceratophyllum demersum HOM05D002648 ORTHO05D002899 1.5e-17 94.7 252 54.4
MELO3C029529.2 Cucumis melo HOM05D003453 ORTHO05D004154 1.4e-15 88.2 81 59.3
Sc14g0003130 Simmondsia chinensis HOM05D003453 ORTHO05D004154 3.2e-15 87.0 331 52.6
BcaB08g34854 Brassica carinata HOM05D003453 ORTHO05D004154 3.5e-14 83.6 114 60.5
BraA07t29361Z Brassica rapa HOM05D003453 ORTHO05D042392 1.9e-12 77.8 89 49.4
HPP92_010787 Vanilla planifolia HOM05D003453 ORTHO05D004154 2.1e-11 74.3 310 48.1
SEGI_12322 Sequoiadendron giganteum HOM05D002488 ORTHO05D002613 6.0e-06 56.2 145 63.4


User provided reference genes

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