Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p59250 Brassica napus HOM05D006945 ORTHO05D005549 1.7e-69 265.8 123 100.0
BraA03t14982Z Brassica rapa HOM05D006945 ORTHO05D005549 1.7e-69 265.8 123 100.0
BraA03t14999Z Brassica rapa HOM05D006945 ORTHO05D005549 2.1e-67 258.8 123 96.7
C07p57450 Brassica napus HOM05D006945 ORTHO05D005549 1.0e-66 256.5 123 95.9
BolC7t46213H Brassica oleracea HOM05D006945 ORTHO05D005549 1.0e-66 256.5 123 95.9
A03p59430 Brassica napus HOM05D006945 ORTHO05D005549 6.6e-66 253.8 123 95.1
C07p58660 Brassica napus HOM05D006945 ORTHO05D005549 8.6e-66 253.4 123 95.1
BolC7t46316H Brassica oleracea HOM05D006945 ORTHO05D005549 8.6e-66 253.4 123 95.1
C06p15940 Brassica napus HOM05D006945 ORTHO05D005549 2.1e-64 248.8 123 93.5
BolC6t36786H Brassica oleracea HOM05D006945 ORTHO05D005549 2.1e-64 248.8 123 93.5
A03p60770 Brassica napus HOM05D006945 ORTHO05D005549 1.1e-60 236.5 123 88.6
BcaNung00515 Brassica carinata HOM05D006945 ORTHO05D005549 1.5e-54 216.1 104 89.4
Thhalv10026848m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 1.4e-47 193.0 123 76.4
Sp7g27900 Schrenkiella parvula HOM05D006945 ORTHO05D005549 1.7e-45 186.0 105 80.0
Carub.0005s0829 Capsella rubella HOM05D006945 ORTHO05D005549 6.7e-42 174.1 128 64.1
Sp7g27890 Schrenkiella parvula HOM05D006945 ORTHO05D005549 5.6e-41 171.0 128 68.0
AT4G30074 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 9.0e-39 163.7 128 60.9
AL7G22130 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 3.4e-38 161.8 121 62.8
A08p19430 Brassica napus HOM05D006945 ORTHO05D005549 3.8e-37 158.3 129 61.2
BraA08t33905Z Brassica rapa HOM05D006945 ORTHO05D005549 3.8e-37 158.3 129 61.2
BcaB03g12631 Brassica carinata HOM05D006945 ORTHO05D005549 3.2e-36 155.2 132 59.8
Thhalv10026566m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 5.5e-36 154.5 130 56.9
Thhalv10027387m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 8.7e-34 147.1 129 56.6
Carub.0007s1053 Capsella rubella HOM05D006945 ORTHO05D005549 1.1e-33 146.7 128 57.8
BcaNung02932 Brassica carinata HOM05D006945 ORTHO05D005549 4.8e-32 141.4 123 53.7
AL7G22140 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 2.4e-31 139.0 130 50.0
Carub.0007s1058 Capsella rubella HOM05D006945 ORTHO05D005549 1.2e-30 136.7 134 50.7
Thhalv10026783m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 5.8e-30 134.4 129 54.3
AT4G30070 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 1.0e-29 133.7 131 48.9
CARHR237970 Cardamine hirsuta HOM05D006945 ORTHO05D005549 1.0e-29 133.7 129 47.3
BcaNung02066 Brassica carinata HOM05D006945 ORTHO05D005549 1.3e-29 133.3 130 50.8
BcaNung02068 Brassica carinata HOM05D006945 ORTHO05D005549 1.3e-29 133.3 130 50.8
C07p57440 Brassica napus HOM05D006945 ORTHO05D005549 3.8e-29 131.7 131 47.3
BolC7t46212H Brassica oleracea HOM05D006945 ORTHO05D005549 4.9e-29 131.3 131 47.3
A08p19440 Brassica napus HOM05D006945 ORTHO05D005549 1.1e-28 130.2 123 52.8
BraA08t33906Z Brassica rapa HOM05D006945 ORTHO05D005549 1.1e-28 130.2 123 52.8
Carub.0004s0716 Capsella rubella HOM05D006945 ORTHO05D005549 3.2e-28 128.6 127 49.6
BcaC08g44188 Brassica carinata HOM05D006945 ORTHO05D005549 4.2e-28 128.3 130 46.2
Sp7g27870 Schrenkiella parvula HOM05D006945 ORTHO05D005549 4.2e-28 128.3 130 48.5
BolC6t36787H Brassica oleracea HOM05D006945 ORTHO05D005549 7.1e-28 127.5 130 46.9
BcaB03g12630 Brassica carinata HOM05D006945 ORTHO05D005549 9.3e-28 127.1 103 56.3
AL7G52460 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 1.2e-27 126.7 111 54.1
BolC7t46664H Brassica oleracea HOM05D006945 ORTHO05D005549 2.7e-27 125.6 128 51.6
Carub.0007s1055 Capsella rubella HOM05D006945 ORTHO05D005549 2.7e-27 125.6 133 45.9
C07p62500 Brassica napus HOM05D006945 ORTHO05D005549 4.6e-27 124.8 129 52.7
BraA03t14998Z Brassica rapa HOM05D006945 ORTHO05D005549 1.0e-26 123.6 130 46.2
A03p59240 Brassica napus HOM05D006945 ORTHO05D005549 1.8e-26 122.9 130 45.4
A03p59420 Brassica napus HOM05D006945 ORTHO05D005549 1.8e-26 122.9 130 46.2
C03p88930 Brassica napus HOM05D006945 ORTHO05D005549 2.3e-26 122.5 128 48.4
CARHR237980 Cardamine hirsuta HOM05D006945 ORTHO05D005549 5.1e-26 121.3 128 51.6
BcaNung00513 Brassica carinata HOM05D006945 ORTHO05D005549 2.5e-25 119.0 112 49.1
BcaNung00514 Brassica carinata HOM05D006945 ORTHO05D005549 2.5e-25 119.0 112 49.1
BcaC02g10382 Brassica carinata HOM05D006945 ORTHO05D005549 2.8e-24 115.5 131 43.5
A07p12270 Brassica napus HOM05D006945 ORTHO05D005549 1.1e-23 113.6 113 46.9
A07p12290 Brassica napus HOM05D006945 ORTHO05D005549 1.1e-23 113.6 113 46.9
BolC3t21204H Brassica oleracea HOM05D006945 ORTHO05D005549 1.1e-23 113.6 125 48.8
BraA07t29011Z Brassica rapa HOM05D006945 ORTHO05D005549 1.1e-23 113.6 113 46.9
C06p15950 Brassica napus HOM05D006945 ORTHO05D005549 1.4e-23 113.2 102 51.0
AT5G38330 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 1.8e-23 112.8 130 43.8
Glyma.15G164400 Glycine max HOM05D006945 ORTHO05D005549 3.1e-23 112.1 124 50.8
Sp5g15500 Schrenkiella parvula HOM05D006945 ORTHO05D005549 6.9e-23 110.9 132 42.4
C04p29510 Brassica napus HOM05D006945 ORTHO05D005549 9.0e-23 110.5 109 47.7
BcaC02g10365 Brassica carinata HOM05D006945 ORTHO05D005549 1.2e-22 110.2 121 43.8
AT5G38317 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 7.6e-22 107.5 128 43.8
BcaC02g10381 Brassica carinata HOM05D006945 ORTHO05D005549 7.6e-22 107.5 131 43.5
Lj2g0024644 Lotus japonicus HOM05D006945 ORTHO05D005549 1.3e-21 106.7 123 47.2
Ciclev10010365m.g Citrus clementina HOM05D006945 ORTHO05D005549 1.7e-21 106.3 125 42.4
Thhalv10000699m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 1.9e-20 102.8 113 44.2
AL8G19370 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 3.2e-20 102.1 123 39.0
BolC4t24502H Brassica oleracea HOM05D006945 ORTHO05D005549 7.2e-20 100.9 109 45.0
Carub.0008s0696 Capsella rubella HOM05D006945 ORTHO05D005549 2.7e-19 99.0 128 39.8
Sp7g27850 Schrenkiella parvula HOM05D006945 ORTHO05D005549 3.6e-19 98.6 122 41.8
Eucgr.C02228 Eucalyptus grandis HOM05D006945 ORTHO05D005549 4.6e-19 98.2 105 45.7
Eucgr.C02231 Eucalyptus grandis HOM05D006945 ORTHO05D005549 4.6e-19 98.2 105 45.7
PGR044G0988 Punica granatum HOM05D006945 ORTHO05D005549 1.0e-18 97.1 134 45.5
Eucgr.C02226 Eucalyptus grandis HOM05D006945 ORTHO05D005549 3.0e-18 95.5 105 44.8
MELO3C003988.2 Cucumis melo HOM05D006945 ORTHO05D005549 3.9e-18 95.1 108 44.4
A03p65360 Brassica napus HOM05D006945 ORTHO05D005549 8.8e-18 94.0 110 45.5
Carub.0004s0306 Capsella rubella HOM05D006945 ORTHO05D005549 8.8e-18 94.0 131 37.4
BraA03t15590Z Brassica rapa HOM05D006945 ORTHO05D005549 2.5e-17 92.4 85 52.9
Eucgr.C02232 Eucalyptus grandis HOM05D006945 ORTHO05D005549 2.5e-17 92.4 105 42.9
FAN17G1318 Fragaria x ananassa HOM05D006945 ORTHO05D005549 7.4e-17 90.9 107 43.0
FvH4_4g06580 Fragaria vesca HOM05D006945 ORTHO05D005549 1.7e-16 89.7 107 43.0
MD12G1050000 Malus domestica HOM05D009688 ORTHO05D005549 2.2e-16 89.4 136 39.7
Cpa.g.sc95.22 Carica papaya HOM05D006945 ORTHO05D005549 6.3e-16 87.8 133 39.8
Lj6g0015237 Lotus japonicus HOM05D006945 ORTHO05D005549 1.1e-15 87.0 122 42.6
AT5G42242 Arabidopsis thaliana HOM05D006945 ORTHO05D005549 1.4e-15 86.7 123 37.4
CARHR214260 Cardamine hirsuta HOM05D006945 ORTHO05D005549 1.5e-14 83.2 98 42.9
Rhsim13G0155500 Rhododendron simsii HOM05D006945 ORTHO05D005549 2.0e-14 82.8 127 33.9
Carub.0007s3775 Capsella rubella HOM05D006945 ORTHO05D005549 5.9e-14 81.3 121 38.0
Sp7g27880 Schrenkiella parvula HOM05D006945 ORTHO05D005549 1.3e-13 80.1 106 40.6
Eucgr.C02229 Eucalyptus grandis HOM05D006945 ORTHO05D005549 2.9e-13 79.0 132 35.6
A03p59410 Brassica napus HOM05D006945 ORTHO05D005549 8.5e-13 77.4 123 33.3
BraA03t14997Z Brassica rapa HOM05D006945 ORTHO05D005549 1.1e-12 77.0 123 33.3
C07p57430 Brassica napus HOM05D006945 ORTHO05D005549 1.9e-12 76.3 123 33.3
TPR.G30224 Trifolium pratense HOM05D006945 ORTHO05D005549 3.6e-11 72.0 108 39.8
Glyma.15G164300 Glycine max HOM05D014986 ORTHO05D014232 1.0e-10 70.5 124 40.3
TPR.G30230 Trifolium pratense HOM05D018581 ORTHO05D005549 1.4e-10 70.1 132 34.1
Rhsim13G0155400 Rhododendron simsii HOM05D006945 ORTHO05D005549 5.1e-10 68.2 124 30.6
Medtr2g037665 Medicago truncatula HOM05D018581 ORTHO05D005549 9.7e-09 63.9 121 33.1
Ah.05g178690 Amaranthus hybridus HOM05D006945 ORTHO05D005549 2.8e-08 62.4 105 38.1
CARHR237960 Cardamine hirsuta HOM05D006945 ORTHO05D005549 3.7e-08 62.0 50 54.0
AL7G22170 Arabidopsis lyrata HOM05D006945 ORTHO05D005549 6.3e-08 61.2 50 54.0
Eucgr.L01935 Eucalyptus grandis HOM05D006945 ORTHO05D005549 8.2e-08 60.8 86 38.4
Medtr2g037105 Medicago truncatula HOM05D018581 ORTHO05D005549 8.2e-08 60.8 123 32.5
Medtr2g037190 Medicago truncatula HOM05D018581 ORTHO05D005549 9.1e-07 57.4 129 32.6
Thhalv10010998m.g Eutrema salsugineum HOM05D006945 ORTHO05D005549 1.5e-06 56.6 128 35.2
Medtr2g037300 Medicago truncatula HOM05D009822 ORTHO05D011160 2.6e-06 55.8 128 34.4
Psat6g103440 Pisum sativum HOM05D009822 ORTHO05D011160 4.5e-06 55.1 129 35.7


User provided reference genes

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