Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p58890 Brassica napus HOM05D009471 ORTHO05D011939 5.8e-39 163.7 79 100.0
BraA03t14949Z Brassica rapa HOM05D009471 ORTHO05D011939 5.8e-39 163.7 79 100.0
BolC7t46164H Brassica oleracea HOM05D009471 ORTHO05D011939 2.9e-38 161.4 79 98.7
BraA09t41701Z Brassica rapa HOM05D009471 ORTHO05D011939 6.4e-38 160.2 79 97.5
A09p63510 Brassica napus HOM05D009471 ORTHO05D011939 1.4e-37 159.1 79 96.2
C07p56860 Brassica napus HOM05D009471 ORTHO05D011939 1.4e-37 159.1 79 97.5
BcaB08g36157 Brassica carinata HOM05D009471 ORTHO05D011939 1.7e-35 152.1 79 92.4
BolC7t46163H Brassica oleracea HOM05D009471 ORTHO05D011939 1.4e-32 142.5 71 98.6
BolC7t46162H Brassica oleracea HOM05D009471 ORTHO05D011939 5.1e-27 124.0 79 78.5
A03p58880 Brassica napus HOM05D009471 ORTHO05D011939 1.9e-26 122.1 79 75.9
BraA03t14948Z Brassica rapa HOM05D009471 ORTHO05D011939 1.9e-26 122.1 79 75.9
Thhalv10026716m.g Eutrema salsugineum HOM05D009471 ORTHO05D011939 4.3e-26 120.9 79 77.2
AT4G13095 Arabidopsis thaliana HOM05D009471 ORTHO05D011939 1.2e-20 102.8 80 65.0
C07p56850 Brassica napus HOM05D009471 ORTHO05D011939 1.6e-20 102.4 61 78.7
CARHR237030 Cardamine hirsuta HOM05D009471 ORTHO05D011939 2.7e-20 101.7 80 66.2
AT4G29285 Arabidopsis thaliana HOM05D009471 ORTHO05D011939 3.5e-20 101.3 79 64.6
Carub.0007s1128 Capsella rubella HOM05D009471 ORTHO05D011939 6.6e-19 97.1 79 59.5
AL7G23160 Arabidopsis lyrata HOM05D009471 ORTHO05D011939 1.9e-18 95.5 67 67.2
BolC6t38591H Brassica oleracea HOM05D009471 ORTHO05D011939 4.9e-14 80.9 79 55.7
A07p30190 Brassica napus HOM05D009471 ORTHO05D011939 6.4e-14 80.5 79 54.4
Carub.0007s1132 Capsella rubella HOM05D009471 ORTHO05D011939 8.4e-14 80.1 80 51.2
C06p34890 Brassica napus HOM05D009471 ORTHO05D011939 1.4e-13 79.3 79 54.4
BraA07t30656Z Brassica rapa HOM05D009471 ORTHO05D011939 2.4e-13 78.6 79 53.2
C06p34930 Brassica napus HOM05D009471 ORTHO05D011939 2.7e-12 75.1 79 53.2
Aa31LG2G21160 Aethionema arabicum HOM05D009471 ORTHO05D011939 4.3e-10 67.8 85 47.1
CARHR237040 Cardamine hirsuta HOM05D009471 ORTHO05D011939 1.3e-09 66.2 81 51.9
AL7G34020 Arabidopsis lyrata HOM05D009471 ORTHO05D038604 1.1e-08 63.2 80 45.0
AL7G23140 Arabidopsis lyrata HOM05D008236 ORTHO05D010394 5.3e-08 60.8 81 39.5
AT4G19905 Arabidopsis thaliana HOM05D009471 ORTHO05D038604 1.2e-07 59.7 80 43.8
Sopen10g029560 Solanum pennellii HOM05D010058 ORTHO05D010053 1.7e-06 55.8 81 45.7
AT4G29300 Arabidopsis thaliana HOM05D008236 ORTHO05D010394 4.9e-06 54.3 81 38.3
CARHR237070 Cardamine hirsuta HOM05D008236 ORTHO05D010394 6.4e-06 53.9 81 37.0


User provided reference genes

Program Settings