Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p58760 Brassica napus HOM05D006447 ORTHO05D007938 1.3e-171 606.3 305 100.0
BraA03t14939Z Brassica rapa HOM05D006447 ORTHO05D007938 3.1e-125 452.2 266 90.2
BcaNung00456 Brassica carinata HOM05D006447 ORTHO05D007938 5.4e-125 451.4 266 89.1
BolC7t46152H Brassica oleracea HOM05D006447 ORTHO05D007938 5.4e-125 451.4 266 89.1
C07p56700 Brassica napus HOM05D006447 ORTHO05D007938 1.0e-120 437.2 292 81.2
Thhalv10026148m.g Eutrema salsugineum HOM05D006447 ORTHO05D007938 2.7e-116 422.5 232 91.8
BcaNung00458 Brassica carinata HOM05D006447 ORTHO05D007938 7.7e-116 421.0 218 98.2
CARHR236900 Cardamine hirsuta HOM05D006447 ORTHO05D007938 2.8e-113 412.5 229 91.3
AT4G29170 Arabidopsis thaliana HOM05D006447 ORTHO05D007938 3.6e-113 412.1 232 91.4
AL7G23270 Arabidopsis lyrata HOM05D006447 ORTHO05D007938 6.4e-110 401.4 232 89.2
Carub.0007s1142 Capsella rubella HOM05D006447 ORTHO05D007938 3.2e-109 399.1 232 87.9
Aa31LG2G21480 Aethionema arabicum HOM05D006447 ORTHO05D007938 4.6e-108 395.2 232 86.2
THA.LOC104814578 Tarenaya hassleriana HOM05D006447 ORTHO05D007938 7.0e-101 371.3 225 83.1
Cfa003143 Carpinus fangiana HOM05D006447 ORTHO05D007938 7.1e-93 344.7 219 81.3
DCAR_024680 Daucus carota HOM05D006447 ORTHO05D007938 7.1e-93 344.7 221 77.8
Prupe.7G215800 Prunus persica HOM05D006447 ORTHO05D007938 9.2e-93 344.4 214 81.8
CAN.G1241.6 Capsicum annuum HOM05D006447 ORTHO05D007938 2.1e-92 343.2 208 82.2
DCAR_031970 Daucus carota HOM05D006447 ORTHO05D007938 2.7e-92 342.8 220 77.7
Sopen12g003620 Solanum pennellii HOM05D006447 ORTHO05D007938 6.0e-92 341.7 219 78.5
Actinidia39754 Actinidia chinensis HOM05D006447 ORTHO05D007938 7.8e-92 341.3 207 81.2
Ca_16628_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 1.3e-91 340.5 211 79.6
CSS0014749 Camellia sinensis var. sinensis HOM05D006447 ORTHO05D007938 1.7e-91 340.1 207 81.2
CsaV3_1G040040 Cucumis sativus L. HOM05D006447 ORTHO05D007938 1.7e-91 340.1 214 79.0
Gorai.001G010200 Gossypium raimondii HOM05D006447 ORTHO05D007938 1.7e-91 340.1 208 80.3
Cpa.g.sc229.2 Carica papaya HOM05D006447 ORTHO05D007938 3.9e-91 339.0 214 79.4
Glyma.01G004700 Glycine max HOM05D006447 ORTHO05D007938 3.9e-91 339.0 214 77.6
ECA234G4260 Erigeron canadensis HOM05D006447 ORTHO05D007938 6.6e-91 338.2 207 79.7
HanXRQChr10g0319031 Helianthus annuus HOM05D006447 ORTHO05D007938 6.6e-91 338.2 212 77.8
Nitab4.5_0000540g0030 Nicotiana tabacum HOM05D006447 ORTHO05D007938 6.6e-91 338.2 207 81.2
MD15G1201700 Malus domestica HOM05D006447 ORTHO05D007938 1.1e-90 337.4 214 79.4
RcHm_v2.0_Chr2g0092441 Rosa chinensis HOM05D006447 ORTHO05D007938 1.1e-90 337.4 214 80.4
EL10Ac5g12560 Beta vulgaris HOM05D006447 ORTHO05D007938 1.5e-90 337.0 206 80.1
Lalb_Chr22g0349841 Lupinus albus HOM05D006447 ORTHO05D007938 1.5e-90 337.0 214 77.6
Potri.018G069800 Populus trichocarpa HOM05D006447 ORTHO05D007938 1.5e-90 337.0 226 76.5
Sed0005705 Sechium edule HOM05D006447 ORTHO05D007938 1.5e-90 337.0 214 79.4
Sc18g0001690 Simmondsia chinensis HOM05D006447 ORTHO05D007938 1.5e-90 337.0 218 75.7
Sc18g0001740 Simmondsia chinensis HOM05D006447 ORTHO05D007938 1.5e-90 337.0 218 75.7
Gohir.A07G009600 Gossypium hirsutum HOM05D006447 ORTHO05D007938 1.9e-90 336.7 208 79.3
FAN26G2507 Fragaria x ananassa HOM05D006447 ORTHO05D007938 2.5e-90 336.3 214 79.9
Peaxi162Scf00498g00029 Petunia axillaris HOM05D006447 ORTHO05D007938 2.5e-90 336.3 207 80.7
PSO063G5072 Papaver somniferum HOM05D006447 ORTHO05D007938 4.3e-90 335.5 207 81.6
Eucgr.C00935 Eucalyptus grandis HOM05D006447 ORTHO05D007938 7.3e-90 334.7 207 77.8
Manes.03G029700 Manihot esculenta HOM05D006447 ORTHO05D007938 7.3e-90 334.7 215 79.1
PSO832G0153 Papaver somniferum HOM05D006447 ORTHO05D007938 9.5e-90 334.3 207 81.2
Sabra18G0061100 Salix brachista HOM05D006447 ORTHO05D007938 9.5e-90 334.3 207 80.2
Migut.K00568 Erythranthe guttata HOM05D006447 ORTHO05D007938 1.2e-89 334.0 215 77.2
PGR142G0783 Punica granatum HOM05D006447 ORTHO05D007938 1.2e-89 334.0 209 79.4
arahy.Tifrunner.gnm1.ann1.2E9KT7 Arachis hypogaea HOM05D006447 ORTHO05D007938 2.1e-89 333.2 240 71.7
arahy.Tifrunner.gnm1.ann1.D97E3U Arachis hypogaea HOM05D006447 ORTHO05D007938 2.1e-89 333.2 240 71.7
FvH4_1g06700 Fragaria vesca HOM05D006447 ORTHO05D007938 2.1e-89 333.2 214 78.0
QL02p040054 Quercus lobata HOM05D006447 ORTHO05D007938 2.1e-89 333.2 216 75.9
TAR626G0261 Trochodendron aralioides HOM05D006447 ORTHO05D007938 2.8e-89 332.8 209 79.4
Lsat_1_v5_gn_5_146261 Lactuca sativa HOM05D006447 ORTHO05D007938 3.6e-89 332.4 206 79.1
Medtr6g090585 Medicago truncatula HOM05D006447 ORTHO05D007938 4.7e-89 332.0 211 77.3
Ciclev10009402m.g Citrus clementina HOM05D006447 ORTHO05D007938 8.1e-89 331.3 214 77.1
TPR.G26948 Trifolium pratense HOM05D006447 ORTHO05D007938 8.1e-89 331.3 211 76.3
TAR626G0126 Trochodendron aralioides HOM05D006447 ORTHO05D007938 8.1e-89 331.3 209 78.9
TAR728G0001 Trochodendron aralioides HOM05D006447 ORTHO05D007938 8.1e-89 331.3 209 78.9
AUR62030454 Chenopodium quinoa HOM05D006447 ORTHO05D007938 1.8e-88 330.1 207 77.8
Lj7A670G54 Lonicera japonica HOM05D006447 ORTHO05D007938 2.3e-88 329.7 212 78.3
Phvul.004G173200 Phaseolus vulgaris HOM05D006447 ORTHO05D007938 5.2e-88 328.6 207 77.8
Hund14295 Selenicereus undatus HOM05D006447 ORTHO05D007938 6.8e-88 328.2 216 77.3
Lj2g0017011 Lotus japonicus HOM05D006447 ORTHO05D007938 1.2e-87 327.4 208 77.9
unitig_749.g13512 Utricularia gibba HOM05D006447 ORTHO05D007938 2.6e-87 326.2 218 75.2
SGA_v2.0_scaffold210G42077 Striga asiatica HOM05D006447 ORTHO05D007938 4.4e-87 325.5 218 72.5
Nitab4.5_0003781g0070 Nicotiana tabacum HOM05D006447 ORTHO05D007938 7.6e-87 324.7 200 80.5
PGSC0003DMG400000348 Solanum tuberosum HOM05D006447 ORTHO05D007938 1.3e-86 323.9 233 72.1
Eucgr.C00941 Eucalyptus grandis HOM05D006447 ORTHO05D007938 1.7e-86 323.6 210 75.2
Aqoxy7G01349 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 2.2e-86 323.2 206 76.7
VMungo0464G1544 Vigna mungo HOM05D006447 ORTHO05D007938 2.2e-86 323.2 209 76.6
SalBow1G2756 Salvia bowleyana HOM05D006447 ORTHO05D007938 4.9e-86 322.0 222 74.3
SalBow1G3435 Salvia bowleyana HOM05D006447 ORTHO05D007938 6.4e-86 321.6 219 74.9
GSVIVG01015263001 Vitis vinifera HOM05D006447 ORTHO05D007938 1.6e-84 317.0 195 79.0
Ca_25608_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 6.0e-84 315.1 197 78.2
ClCG03G015910 Citrullus lanatus HOM05D006447 ORTHO05D007938 1.3e-83 313.9 207 77.3
Os09g0280600 Oryza sativa ssp. japonica HOM05D006447 ORTHO05D007938 1.3e-83 313.9 206 75.2
Cc06_g10870 Coffea canephora HOM05D006447 ORTHO05D007938 3.9e-83 312.4 208 74.5
Oeu057342.1 Olea europaea HOM05D006447 ORTHO05D007938 2.5e-82 309.7 193 78.8
Rhsim05G0029800 Rhododendron simsii HOM05D006447 ORTHO05D007938 3.3e-82 309.3 199 77.9
Nn8g38980 Nelumbo nucifera HOM05D006447 ORTHO05D007938 1.2e-81 307.4 206 72.3
Haze_25859 Corylus avellana HOM05D006447 ORTHO05D007938 1.6e-81 307.0 218 75.7
MBI01_g35891_MAGBIO Magnolia biondii HOM05D006447 ORTHO05D007938 3.6e-81 305.8 206 73.3
Thecc.09G095600 Theobroma cacao HOM05D006447 ORTHO05D007938 4.0e-80 302.4 217 73.3
ATR0705G171 Amborella trichopoda HOM05D006447 ORTHO05D007938 4.4e-79 298.9 206 70.4
Eucgr.L02391 Eucalyptus grandis HOM05D006447 ORTHO05D007938 1.3e-78 297.4 193 74.1
TWI34G0617 Tripterygium wilfordii HOM05D006447 ORTHO05D007938 2.2e-78 296.6 214 73.4
FAN19G0010 Fragaria x ananassa HOM05D006447 ORTHO05D007938 2.9e-78 296.2 214 72.0
AUR62010457 Chenopodium quinoa HOM05D006447 ORTHO05D007938 1.0e-75 287.7 183 76.5
Pp3c5_5010 Physcomitrium patens HOM05D006447 ORTHO05D007938 3.0e-75 286.2 206 68.9
SMO133G0018 Selaginella moellendorffii HOM05D006447 ORTHO05D007938 3.3e-74 282.7 207 65.7
Zm00001eb094560 Zea mays HOM05D006447 ORTHO05D007938 2.4e-72 276.6 216 67.1
Mapoly0019s0059 Marchantia polymorpha HOM05D006447 ORTHO05D007938 4.0e-72 275.8 206 66.5
HPP92_025693 Vanilla planifolia HOM05D006447 ORTHO05D007938 2.0e-71 273.5 195 71.8
AagrBONN_evm.TU.Sc2ySwM_344.5016 Anthoceros agrestis HOM05D006447 ORTHO05D007938 2.2e-70 270.0 206 65.0
Psat1g048880 Pisum sativum HOM05D006447 ORTHO05D007938 4.9e-70 268.9 172 79.1
FAN26G1122 Fragaria x ananassa HOM05D006447 ORTHO05D007938 6.4e-70 268.5 214 69.2
Gohir.D07G009900 Gossypium hirsutum HOM05D006447 ORTHO05D007938 2.4e-69 266.5 169 79.3
Atru.BG.7.p Acer truncatum HOM05D006447 ORTHO05D007938 2.1e-65 253.4 202 68.8
SHI02797 Sapria himalayana HOM05D006447 ORTHO05D007938 3.1e-64 249.6 172 73.3
Dinv42281 Davidia involucrata HOM05D006447 ORTHO05D007938 2.6e-63 246.5 229 59.8
vmacro10828 Vaccinium macrocarpon HOM05D006447 ORTHO05D007938 2.9e-62 243.0 206 62.6
COL.COLO4_18262 Corchorus olitorius HOM05D006447 ORTHO05D007938 3.2e-61 239.6 153 79.7
CiPaw.04G153800 Carya illinoinensis HOM05D006447 ORTHO05D007938 2.6e-55 219.9 142 78.2
PGR142G2135 Punica granatum HOM05D006447 ORTHO05D007938 1.3e-54 217.6 145 72.4
CAN.G3484.1 Capsicum annuum HOM05D006447 ORTHO05D007938 2.2e-54 216.9 139 82.0
Sp7g27093 Schrenkiella parvula HOM05D006447 ORTHO05D007938 2.5e-53 213.4 112 95.5
Sp7g27097 Schrenkiella parvula HOM05D006447 ORTHO05D007938 8.7e-51 204.9 111 91.9
Aqoxy2G00494 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 1.0e-43 181.4 186 56.5
CAN.G1241.4 Capsicum annuum HOM05D006447 ORTHO05D007938 9.7e-42 174.9 120 75.0
CDE05G0869 Ceratophyllum demersum HOM05D006447 ORTHO05D007938 4.8e-41 172.6 132 67.4
MELO3C015434.2 Cucumis melo HOM05D006447 ORTHO05D007938 2.2e-38 163.7 216 48.6
Mapoly0063s0089 Marchantia polymorpha HOM05D006447 ORTHO05D007938 5.1e-35 152.5 113 69.0
CAN.G4329.1 Capsicum annuum HOM05D006447 ORTHO05D007938 2.8e-33 146.7 108 70.4
MCO03G125 Micromonas commoda HOM05D006447 ORTHO05D007938 2.0e-31 140.6 204 38.2
C08p09440 Brassica napus HOM05D006447 ORTHO05D007938 8.5e-30 135.2 101 73.3
BolC8t47800H Brassica oleracea HOM05D006447 ORTHO05D007938 1.4e-29 134.4 101 72.3
PRCOL_00003806 Prasinoderma coloniale HOM05D006447 ORTHO05D007938 4.2e-29 132.9 207 37.2
Cre06.g278850 Chlamydomonas reinhardtii HOM05D006447 ORTHO05D007938 2.1e-28 130.6 193 37.3
HanXRQChr11g0335721 Helianthus annuus HOM05D006447 ORTHO05D007938 8.5e-22 108.6 86 65.1
Lsat_1_v5_gn_1_67520 Lactuca sativa HOM05D006447 ORTHO05D007938 2.6e-18 97.1 76 64.5
CBR_g8047 Chara braunii HOM05D006447 ORTHO05D007938 1.4e-16 91.3 78 52.6
COL.COLO4_18261 Corchorus olitorius HOM05D006447 ORTHO05D007938 1.9e-13 80.9 41 82.9


User provided reference genes

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