Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p58680 Brassica napus HOM05D000249 ORTHO05D033784 4.3e-115 417.9 200 100.0
BolC7t41748H Brassica oleracea HOM05D000249 ORTHO05D000206 1.5e-67 260.0 201 62.7
C07p12690 Brassica napus HOM05D000249 ORTHO05D000206 9.7e-67 257.3 202 61.9
C02p09060 Brassica napus HOM05D000249 ORTHO05D000206 3.7e-66 255.4 201 62.2
C01p08810 Brassica napus HOM05D000249 ORTHO05D000206 9.4e-62 240.7 206 59.7
BolC1t00871H Brassica oleracea HOM05D000249 ORTHO05D000206 9.4e-62 240.7 206 59.7
BolC5t29192H Brassica oleracea HOM05D000249 ORTHO05D000206 8.0e-61 237.7 199 60.3
C05p04170 Brassica napus HOM05D000249 ORTHO05D000206 4.0e-60 235.3 199 59.8
BcaNung05422 Brassica carinata HOM05D000249 ORTHO05D000206 3.1e-57 225.7 206 56.8
BolC7t46143H Brassica oleracea HOM05D000249 ORTHO05D033784 1.3e-55 220.3 118 86.4
BcaC09g51808 Brassica carinata HOM05D000249 ORTHO05D015901 7.2e-54 214.5 201 55.7
BraA10t42698Z Brassica rapa HOM05D000249 ORTHO05D000206 3.5e-48 195.7 176 58.5
BcaC06g35636 Brassica carinata HOM05D000249 ORTHO05D015901 1.3e-47 193.7 196 52.6
BcaC06g35641 Brassica carinata HOM05D000249 ORTHO05D000206 2.0e-43 179.9 152 58.6
A10p04410 Brassica napus HOM05D000249 ORTHO05D000206 1.1e-41 174.1 158 57.6
A02p14670 Brassica napus HOM05D000249 ORTHO05D000206 9.2e-41 171.0 184 48.9
BraA02t06534Z Brassica rapa HOM05D000249 ORTHO05D000206 9.2e-41 171.0 184 48.9
BolC2t08508H Brassica oleracea HOM05D000249 ORTHO05D000206 1.7e-39 166.8 182 48.9
BcaC03g14901 Brassica carinata HOM05D000249 ORTHO05D024041 3.8e-39 165.6 190 47.4
C02p23780 Brassica napus HOM05D000249 ORTHO05D000206 6.6e-39 164.9 184 48.4
Thhalv10025324m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 6.1e-37 158.3 201 45.8
BcaC07g38169 Brassica carinata HOM05D000249 ORTHO05D024041 4.9e-34 148.7 213 43.7
AL7G13810 Arabidopsis lyrata HOM05D000249 ORTHO05D015901 2.4e-33 146.4 136 52.9
BolC8t48591H Brassica oleracea HOM05D000249 ORTHO05D024041 2.7e-32 142.9 200 44.0
BcaC06g35639 Brassica carinata HOM05D000249 ORTHO05D000206 3.3e-30 136.0 195 41.5
C07p01540 Brassica napus HOM05D000249 ORTHO05D000206 8.0e-29 131.3 109 59.6
AL7G12790 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 6.8e-28 128.3 191 37.7
AL7G12760 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 1.2e-27 127.5 185 38.9
Thhalv10022697m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 1.2e-27 127.5 202 38.6
A08p21350 Brassica napus HOM05D000249 ORTHO05D024041 2.0e-27 126.7 194 40.2
C07p62170 Brassica napus HOM05D000249 ORTHO05D015901 4.1e-25 119.0 98 60.2
Thhalv10005688m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 1.6e-24 117.1 190 37.4
AL7G13600 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 1.7e-23 113.6 185 36.2
BcaC04g21272 Brassica carinata HOM05D000249 ORTHO05D000206 8.6e-23 111.3 115 52.2
BcaC07g38170 Brassica carinata HOM05D000249 ORTHO05D024041 1.1e-22 110.9 213 36.6
Sp7g31430 Schrenkiella parvula HOM05D000249 ORTHO05D000206 1.5e-22 110.5 180 36.7
BraA03t15259Z Brassica rapa HOM05D000249 ORTHO05D032890 5.6e-22 108.6 183 34.4
Thhalv10004132m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 5.6e-22 108.6 200 35.0
A10p04310 Brassica napus HOM05D000249 ORTHO05D015901 1.6e-21 107.1 74 67.6
A03p62220 Brassica napus HOM05D000249 ORTHO05D032890 2.1e-21 106.7 188 33.5
A08p30690 Brassica napus HOM05D000249 ORTHO05D000206 6.2e-21 105.1 189 34.4
BraA08t34999Z Brassica rapa HOM05D000249 ORTHO05D000206 6.2e-21 105.1 189 34.4
Carub.0008s0622 Capsella rubella HOM05D000249 ORTHO05D000206 6.2e-21 105.1 152 36.8
BraA03t14930Z Brassica rapa HOM05D000249 ORTHO05D033784 1.8e-20 103.6 48 97.9
A03p64820 Brassica napus HOM05D000249 ORTHO05D027908 3.1e-20 102.8 88 59.1
BolC7t46634H Brassica oleracea HOM05D000249 ORTHO05D015901 1.2e-19 100.9 80 61.2
Carub.0008s0634 Capsella rubella HOM05D000249 ORTHO05D000206 1.5e-19 100.5 197 33.0
BcaNung04321 Brassica carinata HOM05D000249 ORTHO05D032890 2.6e-19 99.8 187 32.1
BcaC05g25141 Brassica carinata HOM05D000249 ORTHO05D014429 2.2e-18 96.7 171 31.0
BolC5t29779H Brassica oleracea HOM05D000249 ORTHO05D014429 2.2e-18 96.7 171 31.0
C05p10330 Brassica napus HOM05D000249 ORTHO05D014429 3.7e-18 95.9 171 31.0
Thhalv10005562m.g Eutrema salsugineum HOM05D000249 ORTHO05D024610 1.4e-17 94.0 185 34.6
BcaC05g25412 Brassica carinata HOM05D000249 ORTHO05D014429 2.4e-17 93.2 171 30.4
C05p12880 Brassica napus HOM05D000249 ORTHO05D014429 2.4e-17 93.2 171 30.4
BolC5t30035H Brassica oleracea HOM05D000249 ORTHO05D014429 2.4e-17 93.2 171 30.4
AL2G28170 Arabidopsis lyrata HOM05D000249 ORTHO05D017420 3.2e-17 92.8 192 32.3
C07p56630 Brassica napus HOM05D000249 ORTHO05D015901 4.1e-17 92.4 60 75.0
BraA10t43371Z Brassica rapa HOM05D000249 ORTHO05D000206 4.1e-17 92.4 178 31.5
BcaC05g25104 Brassica carinata HOM05D000249 ORTHO05D014429 7.1e-17 91.7 171 31.0
BraA06t24071Z Brassica rapa HOM05D000249 ORTHO05D014429 1.2e-16 90.9 158 29.1
Thhalv10027306m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 1.2e-16 90.9 186 31.2
BolC7t46142H Brassica oleracea HOM05D000249 ORTHO05D015901 2.1e-16 90.1 54 81.5
CARHR100900 Cardamine hirsuta HOM05D000249 ORTHO05D014429 3.5e-16 89.4 191 29.8
BcaC04g21285 Brassica carinata HOM05D000249 ORTHO05D032901 1.3e-15 87.4 145 41.4
Thhalv10000490m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 5.1e-15 85.5 195 28.7
BolC7t46516H Brassica oleracea HOM05D000249 ORTHO05D024610 1.9e-14 83.6 109 40.4
Thhalv10026874m.g Eutrema salsugineum HOM05D000249 ORTHO05D014429 2.5e-14 83.2 209 28.7
BcaC04g19894 Brassica carinata HOM05D000249 ORTHO05D000206 5.6e-14 82.0 207 27.5
BolC9t57866H Brassica oleracea HOM05D000249 ORTHO05D000206 5.6e-14 82.0 207 27.5
Aa31LG6G15360 Aethionema arabicum HOM05D000249 ORTHO05D000206 7.3e-14 81.6 160 31.9
A10p12760 Brassica napus HOM05D000249 ORTHO05D000206 9.5e-14 81.3 207 27.5
BolC6t38657H Brassica oleracea HOM05D000249 ORTHO05D000206 9.5e-14 81.3 196 30.6
BolC6t38660H Brassica oleracea HOM05D000249 ORTHO05D000206 9.5e-14 81.3 196 30.6
BraA07t30698Z Brassica rapa HOM05D000249 ORTHO05D000206 9.5e-14 81.3 184 31.0
AT3G24610 Arabidopsis thaliana HOM05D000249 ORTHO05D014429 1.6e-13 80.5 194 30.4
C03p22030 Brassica napus HOM05D000249 ORTHO05D016802 1.6e-13 80.5 147 34.0
A03p18900 Brassica napus HOM05D000249 ORTHO05D016802 2.1e-13 80.1 146 33.6
C06p35430 Brassica napus HOM05D000249 ORTHO05D000206 2.8e-13 79.7 198 31.3
Carub.0007s0234 Capsella rubella HOM05D000249 ORTHO05D000206 2.8e-13 79.7 125 40.0
A10p16010 Brassica napus HOM05D000249 ORTHO05D000206 4.7e-13 79.0 202 27.2
BraA10t43368Z Brassica rapa HOM05D000249 ORTHO05D000206 4.7e-13 79.0 207 27.1
BraA03t11149Z Brassica rapa HOM05D000249 ORTHO05D016802 8.1e-13 78.2 146 32.9
BcaC08g45761 Brassica carinata HOM05D000249 ORTHO05D000206 1.1e-12 77.8 195 30.8
BolC6t38651H Brassica oleracea HOM05D000249 ORTHO05D000206 1.4e-12 77.4 196 30.6
BolC6t38664H Brassica oleracea HOM05D000249 ORTHO05D000206 1.4e-12 77.4 196 29.6
Thhalv10006011m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 1.8e-12 77.0 193 33.7
AL3G40190 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 2.4e-12 76.6 159 29.6
AL7G14590 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 2.4e-12 76.6 205 28.8
BcaNung05421 Brassica carinata HOM05D000249 ORTHO05D015901 2.4e-12 76.6 54 68.5
CARHR246290 Cardamine hirsuta HOM05D000249 ORTHO05D000206 3.1e-12 76.3 151 34.4
BolC3t14575H Brassica oleracea HOM05D000249 ORTHO05D016802 4.0e-12 75.9 147 33.3
C07p60890 Brassica napus HOM05D000249 ORTHO05D024610 5.2e-12 75.5 111 39.6
Thhalv10003343m.g Eutrema salsugineum HOM05D000249 ORTHO05D016802 1.2e-11 74.3 145 31.7
C07p12670 Brassica napus HOM05D000249 ORTHO05D015901 1.5e-11 73.9 47 70.2
Carub.0007s0183 Capsella rubella HOM05D000249 ORTHO05D000206 2.0e-11 73.6 161 32.3
Thhalv10029221m.g Eutrema salsugineum HOM05D000249 ORTHO05D017420 2.0e-11 73.6 151 33.1
AT2G14288 Arabidopsis thaliana HOM05D000249 ORTHO05D014429 2.6e-11 73.2 206 26.7
BcaC06g35637 Brassica carinata HOM05D000249 ORTHO05D093136 2.6e-11 73.2 47 70.2
BcaNung01924 Brassica carinata HOM05D000249 ORTHO05D000206 2.6e-11 73.2 193 28.0
C07p12660 Brassica napus HOM05D000249 ORTHO05D000206 3.4e-11 72.8 49 65.3
AL7G11730 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 5.8e-11 72.0 211 30.3
Carub.0003s0535 Capsella rubella HOM05D000249 ORTHO05D014429 5.8e-11 72.0 174 32.2
Thhalv10019855m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 7.6e-11 71.6 178 28.7
BcaC03g13364 Brassica carinata HOM05D000249 ORTHO05D000206 9.9e-11 71.2 182 28.0
Carub.0003s2500 Capsella rubella HOM05D000249 ORTHO05D000206 9.9e-11 71.2 187 25.7
C06p45750 Brassica napus HOM05D000249 ORTHO05D000206 1.3e-10 70.9 191 28.8
Carub.0011s0005 Capsella rubella HOM05D000249 ORTHO05D000206 1.3e-10 70.9 176 28.4
Carub.0003s3024 Capsella rubella HOM05D000249 ORTHO05D024610 1.7e-10 70.5 146 34.2
CARHR210870 Cardamine hirsuta HOM05D000249 ORTHO05D000206 1.7e-10 70.5 189 29.6
AT4G36840 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 3.8e-10 69.3 167 29.3
C02p05010 Brassica napus HOM05D000249 ORTHO05D000206 3.8e-10 69.3 162 27.8
BcaNung00910 Brassica carinata HOM05D000249 ORTHO05D000206 6.4e-10 68.6 184 26.1
C01p00900 Brassica napus HOM05D000249 ORTHO05D000206 6.4e-10 68.6 184 26.1
BolC1t00091H Brassica oleracea HOM05D000249 ORTHO05D000206 6.4e-10 68.6 184 26.1
BcaC06g35643 Brassica carinata HOM05D000249 ORTHO05D015901 8.4e-10 68.2 47 66.0
BcaB01g03919 Brassica carinata HOM05D000249 ORTHO05D016802 1.9e-09 67.0 140 32.1
C09p33550 Brassica napus HOM05D000249 ORTHO05D032901 9.2e-09 64.7 95 42.1
BolC9t56190H Brassica oleracea HOM05D000249 ORTHO05D032901 9.2e-09 64.7 95 42.1
AL7G33450 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 1.2e-08 64.3 142 31.0
AL7G30180 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 1.6e-08 63.9 175 26.9
BcaNung00937 Brassica carinata HOM05D000249 ORTHO05D024028 1.6e-08 63.9 185 28.6
CARHR146050 Cardamine hirsuta HOM05D000249 ORTHO05D033102 2.1e-08 63.5 61 45.9
Thhalv10025580m.g Eutrema salsugineum HOM05D000249 ORTHO05D000206 2.1e-08 63.5 173 31.2
BcaB01g05529 Brassica carinata HOM05D000249 ORTHO05D000206 7.8e-08 61.6 163 27.0
A10p12790 Brassica napus HOM05D000249 ORTHO05D000206 7.8e-08 61.6 141 26.2
C05p39300 Brassica napus HOM05D000249 ORTHO05D000206 7.8e-08 61.6 185 26.5
BolC5t32666H Brassica oleracea HOM05D000249 ORTHO05D000206 7.8e-08 61.6 185 26.5
BraA10t42708Z Brassica rapa HOM05D000249 ORTHO05D000206 7.8e-08 61.6 46 60.9
PSO541G4415 Papaver somniferum HOM05D000249 ORTHO05D000206 2.3e-07 60.1 171 28.7
AL7G12140 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 6.6e-07 58.5 163 28.8
A03p04600 Brassica napus HOM05D000249 ORTHO05D000206 6.6e-07 58.5 162 27.2
Dinv19486 Davidia involucrata HOM05D000249 ORTHO05D000206 6.6e-07 58.5 168 28.0
AL4G11270 Arabidopsis lyrata HOM05D000249 ORTHO05D000206 8.7e-07 58.2 164 26.8
CARHR246590 Cardamine hirsuta HOM05D000249 ORTHO05D000206 8.7e-07 58.2 138 33.3
PSO675G5947 Papaver somniferum HOM05D000249 ORTHO05D000206 8.7e-07 58.2 173 27.7
Sp6g05040 Schrenkiella parvula HOM05D000249 ORTHO05D016802 1.1e-06 57.8 67 44.8
AT2G21950 Arabidopsis thaliana HOM05D000249 ORTHO05D000206 1.5e-06 57.4 165 27.3
BcaB03g12445 Brassica carinata HOM05D000249 ORTHO05D092722 1.9e-06 57.0 67 52.2
C03p05260 Brassica napus HOM05D000249 ORTHO05D000206 3.3e-06 56.2 177 27.1
BcaC06g34836 Brassica carinata HOM05D043678 ORTHO05D039160 4.3e-06 55.8 50 58.0
BolC7t42818H Brassica oleracea HOM05D043678 ORTHO05D039160 4.3e-06 55.8 50 58.0
Carub.0002s2327 Capsella rubella HOM05D000249 ORTHO05D000206 5.6e-06 55.5 202 26.2
BolC3t13039H Brassica oleracea HOM05D000249 ORTHO05D000206 7.3e-06 55.1 135 28.1
Thhalv10029391m.g Eutrema salsugineum HOM05D000249 ORTHO05D015346 7.3e-06 55.1 195 26.7
C03p05190 Brassica napus HOM05D000249 ORTHO05D000206 9.6e-06 54.7 162 26.5


User provided reference genes

Program Settings