Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p58660 Brassica napus HOM05D008344 ORTHO05D006413 5.7e-37 157.5 108 100.0
BraA03t14927Z Brassica rapa HOM05D008344 ORTHO05D006413 1.3e-36 156.4 108 99.1
BolC1t01011H Brassica oleracea HOM05D008344 ORTHO05D006413 2.0e-26 122.5 116 81.0
BcaNung00447 Brassica carinata HOM05D008344 ORTHO05D006413 3.4e-26 121.7 69 94.2
C01p10500 Brassica napus HOM05D008344 ORTHO05D011034 3.4e-26 121.7 81 85.2
BraA01t00842Z Brassica rapa HOM05D008344 ORTHO05D011034 3.4e-26 121.7 81 85.2
Sp7g26970 Schrenkiella parvula HOM05D008344 ORTHO05D006413 5.9e-26 120.9 114 82.5
Thhalv10026613m.g Eutrema salsugineum HOM05D008344 ORTHO05D006413 2.2e-25 119.0 71 91.5
A01p08960 Brassica napus HOM05D008344 ORTHO05D011034 2.9e-25 118.6 75 86.7
AL7G23430 Arabidopsis lyrata HOM05D008344 ORTHO05D006413 3.2e-24 115.2 75 81.3
Carub.0007s1161 Capsella rubella HOM05D008344 ORTHO05D006413 6.1e-23 110.9 77 79.2
BcaC07g38365 Brassica carinata HOM05D008344 ORTHO05D006413 7.9e-23 110.5 108 75.9
C08p11130 Brassica napus HOM05D008344 ORTHO05D006413 7.9e-23 110.5 108 75.9
BolC8t48782H Brassica oleracea HOM05D008344 ORTHO05D006413 1.8e-22 109.4 108 75.0
BcaB03g12592 Brassica carinata HOM05D008344 ORTHO05D006413 6.7e-22 107.5 81 79.0
C07p56610 Brassica napus HOM05D008344 ORTHO05D006413 1.1e-21 106.7 55 98.2
AT4G29030 Arabidopsis thaliana HOM05D008344 ORTHO05D006413 1.5e-21 106.3 75 76.0
BolC8t48789H Brassica oleracea HOM05D008344 ORTHO05D006413 9.7e-21 103.6 81 72.8
BcaC09g51682 Brassica carinata HOM05D008344 ORTHO05D006413 2.0e-18 95.9 57 89.5
Medtr7g099670 Medicago truncatula HOM05D007427 ORTHO05D006413 1.9e-08 62.8 61 63.9
Lj1g0018605 Lotus japonicus HOM05D007427 ORTHO05D006413 9.4e-08 60.5 63 63.5
Psat3g049800 Pisum sativum HOM05D007427 ORTHO05D006413 9.4e-08 60.5 61 55.7
Glyma.19G171900 Glycine max HOM05D007427 ORTHO05D006413 4.7e-07 58.2 64 60.9
Phvul.001G168900 Phaseolus vulgaris HOM05D007427 ORTHO05D006413 4.7e-07 58.2 53 69.8
RcHm_v2.0_Chr6g0285411 Rosa chinensis HOM05D007427 ORTHO05D006413 4.7e-07 58.2 71 53.5
Glyma.03G170800 Glycine max HOM05D007427 ORTHO05D006413 8.0e-07 57.4 64 60.9
Duzib138G0914 Durio zibethinus HOM05D007427 ORTHO05D006413 1.8e-06 56.2 59 62.7
Glyma.03G170900 Glycine max HOM05D007427 ORTHO05D006413 2.3e-06 55.8 55 63.6
VMungo1383G3325 Vigna mungo HOM05D007427 ORTHO05D006413 4.0e-06 55.1 54 63.0
Ciclev10022672m.g Citrus clementina HOM05D007427 ORTHO05D006413 5.2e-06 54.7 77 50.6
Glyma.10G043100 Glycine max HOM05D007427 ORTHO05D006413 5.2e-06 54.7 64 54.7
Rhsim13G0042300 Rhododendron simsii HOM05D007427 ORTHO05D006413 5.2e-06 54.7 63 60.3


User provided reference genes

Program Settings