Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p57660 Brassica napus HOM05D007179 ORTHO05D009124 7.3e-84 313.9 166 100.0
BraA03t14832Z Brassica rapa HOM05D007179 ORTHO05D009124 6.1e-83 310.8 166 98.8
C07p55870 Brassica napus HOM05D007179 ORTHO05D009124 3.5e-78 295.0 166 94.0
BolC7t46066H Brassica oleracea HOM05D007179 ORTHO05D009124 4.9e-72 274.6 167 91.0
BcaC06g32651 Brassica carinata HOM05D007179 ORTHO05D009124 1.0e-69 266.9 161 89.4
Sp7g25970 Schrenkiella parvula HOM05D007179 ORTHO05D009124 5.6e-60 234.6 165 79.4
C01p24450 Brassica napus HOM05D007179 ORTHO05D009124 7.3e-60 234.2 170 79.4
BcaNung01603 Brassica carinata HOM05D007179 ORTHO05D009124 1.4e-58 229.9 170 77.6
A01p19410 Brassica napus HOM05D007179 ORTHO05D009124 8.4e-56 220.7 169 76.3
BraA01t01881Z Brassica rapa HOM05D007179 ORTHO05D009124 8.4e-56 220.7 169 76.3
Thhalv10026434m.g Eutrema salsugineum HOM05D007179 ORTHO05D009124 6.0e-54 214.5 164 72.6
Carub.0007s1277 Capsella rubella HOM05D007179 ORTHO05D009124 1.9e-52 209.5 166 72.9
AT4G28025 Arabidopsis thaliana HOM05D007179 ORTHO05D009124 3.3e-52 208.8 166 73.5
AL7G24590 Arabidopsis lyrata HOM05D007179 ORTHO05D009124 7.3e-52 207.6 165 72.1
BolC1t02394H Brassica oleracea HOM05D007179 ORTHO05D009124 2.4e-47 192.6 118 87.3
CARHR235720 Cardamine hirsuta HOM05D007179 ORTHO05D009124 5.4e-47 191.4 172 68.0
Aa31LG3G160 Aethionema arabicum HOM05D007179 ORTHO05D009124 7.1e-39 164.5 161 61.5
THA.LOC104817810 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 5.3e-34 148.3 161 58.4
THA.LOC104811817 Tarenaya hassleriana HOM05D007179 ORTHO05D009124 1.0e-32 144.1 155 57.4
Rhsim01G0010000 Rhododendron simsii HOM05D007179 ORTHO05D009124 6.5e-32 141.4 121 64.5
CSS0047035 Camellia sinensis var. sinensis HOM05D007179 ORTHO05D009124 5.5e-31 138.3 158 54.4
CANSAT11G0330 Cannabis sativa HOM05D007179 ORTHO05D009124 1.2e-30 137.1 115 62.6
MD16G1263600 Malus domestica HOM05D007179 ORTHO05D009124 4.6e-30 135.2 156 53.2
CiPaw.08G039500 Carya illinoinensis HOM05D007179 ORTHO05D009124 3.0e-29 132.5 137 57.7
Prupe.1G095600 Prunus persica HOM05D007179 ORTHO05D009124 3.0e-29 132.5 122 60.7
SalBow1G0390 Salvia bowleyana HOM05D007179 ORTHO05D009124 3.9e-29 132.1 127 59.8
FvH4_4g08570 Fragaria vesca HOM05D007179 ORTHO05D009124 6.7e-29 131.3 138 55.8
Cpa.g.c29666.1 Carica papaya HOM05D007179 ORTHO05D009124 1.1e-28 130.6 133 54.9
CiPaw.07G187200 Carya illinoinensis HOM05D007179 ORTHO05D009124 1.1e-28 130.6 135 57.8
PGSC0003DMG400027448 Solanum tuberosum HOM05D007179 ORTHO05D009124 1.1e-28 130.6 101 70.3
Cc06_g13840 Coffea canephora HOM05D007179 ORTHO05D009124 1.9e-28 129.8 121 62.0
Oeu058831.1 Olea europaea HOM05D007179 ORTHO05D009124 1.9e-28 129.8 158 50.6
MSTRG.26242 Avicennia marina HOM05D007179 ORTHO05D009124 3.3e-28 129.0 119 60.5
Solyc07g006490.3 Solanum lycopersicum HOM05D007179 ORTHO05D009124 3.3e-28 129.0 101 69.3
Sopen07g002570 Solanum pennellii HOM05D007179 ORTHO05D009124 3.3e-28 129.0 101 70.3
GSVIVG01032307001 Vitis vinifera HOM05D007179 ORTHO05D009124 3.3e-28 129.0 118 58.5
Dinv41297 Davidia involucrata HOM05D007179 ORTHO05D009124 5.7e-28 128.3 160 51.9
RcHm_v2.0_Chr4g0404651 Rosa chinensis HOM05D007179 ORTHO05D009124 5.7e-28 128.3 130 57.7
TAR626G0641 Trochodendron aralioides HOM05D007179 ORTHO05D009124 5.7e-28 128.3 113 60.2
Gorai.009G007600 Gossypium raimondii HOM05D007179 ORTHO05D009124 9.6e-28 127.5 101 66.3
Gohir.D05G007500 Gossypium hirsutum HOM05D007179 ORTHO05D009124 1.3e-27 127.1 100 67.0
Sed0008122 Sechium edule HOM05D007179 ORTHO05D009124 1.3e-27 127.1 127 56.7
Atru.chr7.533 Acer truncatum HOM05D007179 ORTHO05D009124 2.8e-27 125.9 136 54.4
Psat0s236g0160 Pisum sativum HOM05D007179 ORTHO05D009124 2.8e-27 125.9 134 53.7
Potri.006G175600 Populus trichocarpa HOM05D007179 ORTHO05D009124 2.8e-27 125.9 118 61.0
PGR102G1777 Punica granatum HOM05D007179 ORTHO05D009124 2.8e-27 125.9 156 52.6
Nn1g04316 Nelumbo nucifera HOM05D007179 ORTHO05D009124 8.2e-27 124.4 113 61.1
Thecc.09G162500 Theobroma cacao HOM05D007179 ORTHO05D009124 1.1e-26 124.0 101 66.3
Gohir.A05G006600 Gossypium hirsutum HOM05D007179 ORTHO05D009124 1.4e-26 123.6 101 64.4
TWI63G0613 Tripterygium wilfordii HOM05D007179 ORTHO05D009124 1.4e-26 123.6 113 59.3
Medtr4g129320 Medicago truncatula HOM05D007179 ORTHO05D009124 1.8e-26 123.2 113 60.2
arahy.Tifrunner.gnm1.ann1.8TJD28 Arachis hypogaea HOM05D007179 ORTHO05D009124 2.4e-26 122.9 113 59.3
Sabra06G0134300 Salix brachista HOM05D007179 ORTHO05D009124 2.4e-26 122.9 118 58.5
ECA236G0374 Erigeron canadensis HOM05D007179 ORTHO05D009124 3.1e-26 122.5 113 61.1
Peaxi162Scf00457g00318 Petunia axillaris HOM05D007179 ORTHO05D009124 3.1e-26 122.5 101 66.3
arahy.Tifrunner.gnm1.ann1.7FN6WP Arachis hypogaea HOM05D007179 ORTHO05D009124 4.0e-26 122.1 113 59.3
Nitab4.5_0011540g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 4.0e-26 122.1 106 63.2
Migut.K00269 Erythranthe guttata HOM05D007179 ORTHO05D009124 6.9e-26 121.3 114 60.5
Eucgr.C02437 Eucalyptus grandis HOM05D007179 ORTHO05D009124 6.9e-26 121.3 114 57.9
Actinidia24032 Actinidia chinensis HOM05D007179 ORTHO05D009124 1.2e-25 120.6 102 65.7
Lalb_Chr13g0300481 Lupinus albus HOM05D007179 ORTHO05D009124 1.2e-25 120.6 113 60.2
Hund08993 Selenicereus undatus HOM05D007179 ORTHO05D009124 3.4e-25 119.0 99 64.6
MBI15_g26085_MAGBIO Magnolia biondii HOM05D007179 ORTHO05D009124 4.5e-25 118.6 100 63.0
vmacro13080 Vaccinium macrocarpon HOM05D007179 ORTHO05D009124 5.8e-25 118.2 82 70.7
Lsat_1_v5_gn_8_65641 Lactuca sativa HOM05D007179 ORTHO05D009124 1.0e-24 117.5 100 64.0
AUR62040282 Chenopodium quinoa HOM05D007179 ORTHO05D009124 6.5e-24 114.8 134 50.7
ClCG11G012230 Citrullus lanatus HOM05D007179 ORTHO05D009124 1.1e-23 114.0 113 60.2
Aqoxy7G03201 Aquilegia oxysepala HOM05D007179 ORTHO05D009124 1.4e-23 113.6 144 47.9
CAN.G584.44 Capsicum annuum HOM05D007179 ORTHO05D009124 1.4e-23 113.6 89 70.8
HanXRQChr05g0136491 Helianthus annuus HOM05D007179 ORTHO05D009124 1.4e-23 113.6 91 64.8
MELO3C004033.2 Cucumis melo HOM05D007179 ORTHO05D009124 7.1e-23 111.3 113 57.5
DCAR_017946 Daucus carota HOM05D007179 ORTHO05D009124 7.1e-23 111.3 90 68.9
Manes.06G029800 Manihot esculenta HOM05D007179 ORTHO05D009124 9.3e-23 110.9 98 59.2
Ciclev10009752m.g Citrus clementina HOM05D007179 ORTHO05D009124 1.6e-22 110.2 98 61.2
CsaV3_2G008330 Cucumis sativus L. HOM05D007179 ORTHO05D009124 1.6e-22 110.2 159 46.5
Lj9A729T43 Lonicera japonica HOM05D007179 ORTHO05D009124 2.1e-22 109.8 128 53.1
Lj4g0019685 Lotus japonicus HOM05D007179 ORTHO05D009124 3.5e-22 109.0 127 49.6
COL.COLO4_16058 Corchorus olitorius HOM05D007179 ORTHO05D009124 4.6e-22 108.6 146 52.1
Glyma.17G067900 Glycine max HOM05D007179 ORTHO05D009124 4.6e-22 108.6 113 54.9
unitig_37.g12688 Utricularia gibba HOM05D007179 ORTHO05D009124 4.6e-22 108.6 123 51.2
EL10Ac8g18859 Beta vulgaris HOM05D007179 ORTHO05D009124 1.0e-21 107.5 81 67.9
BcaC09g50519 Brassica carinata HOM05D000147 ORTHO05D013131 1.0e-21 107.5 61 85.2
FAN22G0121 Fragaria x ananassa HOM05D007179 ORTHO05D009124 1.3e-21 107.1 78 69.2
PSO063G6628 Papaver somniferum HOM05D007179 ORTHO05D009124 3.0e-21 105.9 100 59.0
PSO782G3484 Papaver somniferum HOM05D007179 ORTHO05D009124 3.0e-21 105.9 100 59.0
VMungo1215G3157 Vigna mungo HOM05D007179 ORTHO05D009124 3.9e-21 105.5 120 53.3
Sc14g0001110 Simmondsia chinensis HOM05D007179 ORTHO05D009124 6.7e-21 104.8 87 64.4
Duzib150G1658 Durio zibethinus HOM05D007179 ORTHO05D009124 1.1e-20 104.0 85 65.9
AUR62039974 Chenopodium quinoa HOM05D007179 ORTHO05D009124 2.5e-20 102.8 119 51.3
Phvul.003G150500 Phaseolus vulgaris HOM05D007179 ORTHO05D009124 1.3e-19 100.5 102 54.9
Actinidia24777 Actinidia chinensis HOM05D007179 ORTHO05D009124 2.8e-19 99.4 70 70.0
Ca_21187_v3 Cicer arietinum L. HOM05D000001 ORTHO05D009942 4.8e-19 98.6 84 61.9
FAN17G2417 Fragaria x ananassa HOM05D007179 ORTHO05D009124 6.3e-19 98.2 71 69.0
Mapoly0124s0027 Marchantia polymorpha HOM05D007179 ORTHO05D009124 1.4e-18 97.1 140 43.6
Hund26395 Selenicereus undatus HOM05D007179 ORTHO05D009124 2.4e-18 96.3 104 55.8
CDE02G2992 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 5.3e-18 95.1 73 63.0
ATR0580G253 Amborella trichopoda HOM05D007179 ORTHO05D009124 6.9e-18 94.7 92 55.4
CDE05G2983 Ceratophyllum demersum HOM05D007179 ORTHO05D009124 1.5e-17 93.6 73 63.0
Nitab4.5_0002004g0010 Nicotiana tabacum HOM05D007179 ORTHO05D009124 4.5e-17 92.0 71 66.2
HPP92_018535 Vanilla planifolia HOM05D007179 ORTHO05D009124 5.9e-17 91.7 129 43.4
Zm00001eb246810 Zea mays HOM05D007179 ORTHO05D009124 1.1e-15 87.4 136 45.6
Medtr4g129300 Medicago truncatula HOM05D007179 ORTHO05D009124 9.4e-15 84.3 63 66.7
SMO358G0032 Selaginella moellendorffii HOM05D007179 ORTHO05D009124 9.4e-15 84.3 87 54.0
Pp3c12_25950 Physcomitrium patens HOM05D007179 ORTHO05D009124 4.6e-14 82.0 91 48.4
AagrBONN_evm.TU.Sc2ySwM_362.2423 Anthoceros agrestis HOM05D007179 ORTHO05D009124 2.3e-13 79.7 146 37.0
SGA_v2.0_scaffold325G48698 Striga asiatica HOM05D007179 ORTHO05D009124 2.3e-13 79.7 73 58.9
BcaC09g50518 Brassica carinata HOM05D005733 ORTHO05D007442 3.7e-11 72.4 64 70.3
Haze_22155 Corylus avellana HOM05D007179 ORTHO05D009124 2.6e-09 66.2 44 63.6
Haze_22156 Corylus avellana HOM05D007179 ORTHO05D009124 2.2e-08 63.2 105 45.7


User provided reference genes

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