Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p57480 Brassica napus HOM05D013848 ORTHO05D102444 2.3e-87 325.5 161 100.0
BcaC01g02596 Brassica carinata HOM05D013848 ORTHO05D093236 2.2e-29 132.9 66 92.4
A02p19490 Brassica napus HOM05D013848 ORTHO05D031802 3.0e-26 122.5 68 85.3
C06p35820 Brassica napus HOM05D013848 ORTHO05D031802 1.9e-25 119.8 67 85.1
BcaC03g15519 Brassica carinata HOM05D013848 ORTHO05D090975 1.2e-22 110.5 77 72.7
BcaNung01633 Brassica carinata HOM05D000553 ORTHO05D000460 7.7e-22 107.8 87 66.7
BcaNung01629 Brassica carinata HOM05D000553 ORTHO05D000460 1.4e-20 103.6 78 70.5
C03p17320 Brassica napus HOM05D013848 ORTHO05D097581 2.5e-20 102.8 54 90.7
BcaC04g23951 Brassica carinata HOM05D013848 ORTHO05D031802 3.6e-19 99.0 52 88.5
BcaC01g00180 Brassica carinata HOM05D000835 ORTHO05D002122 4.8e-16 88.6 49 81.6
BolC1t02367H Brassica oleracea HOM05D000553 ORTHO05D000460 2.8e-08 62.8 38 78.9
BraA03t14816Z Brassica rapa HOM05D000553 ORTHO05D000460 6.3e-08 61.6 29 100.0
vmacro10138 Vaccinium macrocarpon HOM05D000553 ORTHO05D000460 3.1e-07 59.3 34 82.4
AT4G27745 Arabidopsis thaliana HOM05D000553 ORTHO05D000460 5.3e-07 58.5 29 93.1
BcaC09g50543 Brassica carinata HOM05D000553 ORTHO05D000460 5.3e-07 58.5 29 93.1
C01p24100 Brassica napus HOM05D000553 ORTHO05D000460 5.3e-07 58.5 29 93.1
CARHR235470 Cardamine hirsuta HOM05D000553 ORTHO05D000460 5.3e-07 58.5 29 93.1
Sp7g25710 Schrenkiella parvula HOM05D000553 ORTHO05D000460 5.3e-07 58.5 29 93.1
THA.LOC104825158 Tarenaya hassleriana HOM05D000553 ORTHO05D000460 5.3e-07 58.5 29 89.7
BolC7t46049H Brassica oleracea HOM05D000553 ORTHO05D000460 7.0e-07 58.2 29 93.1
Carub.0007s1307 Capsella rubella HOM05D000553 ORTHO05D000460 1.6e-06 57.0 29 89.7
Aa31LG3G9700 Aethionema arabicum HOM05D000553 ORTHO05D000460 2.0e-06 56.6 29 89.7
AL7G24910 Arabidopsis lyrata HOM05D000553 ORTHO05D000460 2.0e-06 56.6 29 89.7
BcaNung01624 Brassica carinata HOM05D000553 ORTHO05D000460 2.0e-06 56.6 29 89.7
A01p19200 Brassica napus HOM05D000553 ORTHO05D000460 2.0e-06 56.6 29 89.7
BraA01t01862Z Brassica rapa HOM05D000553 ORTHO05D000460 2.0e-06 56.6 29 89.7
Thhalv10026634m.g Eutrema salsugineum HOM05D000553 ORTHO05D000460 2.0e-06 56.6 29 89.7
TWI39G1071 Tripterygium wilfordii HOM05D000553 ORTHO05D000460 2.0e-06 56.6 29 89.7
MSTRG.27007 Avicennia marina HOM05D000553 ORTHO05D000460 3.5e-06 55.8 29 86.2
CSS0008203 Camellia sinensis var. sinensis HOM05D000553 ORTHO05D000460 3.5e-06 55.8 29 86.2
CSS0027389 Camellia sinensis var. sinensis HOM05D000553 ORTHO05D000460 3.5e-06 55.8 29 86.2
Duzib205G1264 Durio zibethinus HOM05D000553 ORTHO05D000460 3.5e-06 55.8 35 74.3
Oeu010704.1 Olea europaea HOM05D000553 ORTHO05D000460 3.5e-06 55.8 29 89.7
TPR.G33643 Trifolium pratense HOM05D000553 ORTHO05D000002 3.5e-06 55.8 40 65.0
TAR629G3248 Trochodendron aralioides HOM05D000553 ORTHO05D000460 3.5e-06 55.8 29 86.2
HanXRQChr07g0192121 Helianthus annuus HOM05D000553 ORTHO05D000460 4.5e-06 55.5 29 82.8
MD01G1224700 Malus domestica HOM05D000553 ORTHO05D000460 4.5e-06 55.5 29 86.2
Manes.05G192500 Manihot esculenta HOM05D000553 ORTHO05D000460 4.5e-06 55.5 29 82.8
Manes.05G192760 Manihot esculenta HOM05D000553 ORTHO05D000460 4.5e-06 55.5 29 82.8
Phvul.009G047600 Phaseolus vulgaris HOM05D000553 ORTHO05D000460 4.5e-06 55.5 35 71.4
Thecc.03G203300 Theobroma cacao HOM05D000553 ORTHO05D000460 4.5e-06 55.5 35 71.4
Zm00001eb408710 Zea mays HOM05D000553 ORTHO05D000460 4.5e-06 55.5 29 82.8
C09p04560 Brassica napus HOM05D013848 ORTHO05D102452 5.9e-06 55.1 32 78.1
Os12g0484700 Oryza sativa ssp. japonica HOM05D000553 ORTHO05D000460 5.9e-06 55.1 29 82.8
PSO063G4145 Papaver somniferum HOM05D000553 ORTHO05D000460 5.9e-06 55.1 29 86.2
PSO782G2620 Papaver somniferum HOM05D000553 ORTHO05D000460 5.9e-06 55.1 29 86.2
Peaxi162Scf00074g00338 Petunia axillaris HOM05D000553 ORTHO05D000460 5.9e-06 55.1 29 86.2
THA.LOC104811903 Tarenaya hassleriana HOM05D000553 ORTHO05D000460 5.9e-06 55.1 29 86.2
Ciclev10022980m.g Citrus clementina HOM05D000553 ORTHO05D000460 7.7e-06 54.7 35 71.4
Migut.F00181 Erythranthe guttata HOM05D000553 ORTHO05D000460 7.7e-06 54.7 29 82.8
Eucgr.K00408 Eucalyptus grandis HOM05D000553 ORTHO05D000460 7.7e-06 54.7 29 86.2
FvH4_7g32183 Fragaria vesca HOM05D000553 ORTHO05D000460 7.7e-06 54.7 29 86.2
FAN01G2385 Fragaria x ananassa HOM05D000553 ORTHO05D000460 7.7e-06 54.7 29 86.2
FAN03G2919 Fragaria x ananassa HOM05D000553 ORTHO05D017920 7.7e-06 54.7 29 86.2
FAN06G1837 Fragaria x ananassa HOM05D000553 ORTHO05D000460 7.7e-06 54.7 29 86.2
FAN10G2751 Fragaria x ananassa HOM05D000553 ORTHO05D000460 7.7e-06 54.7 29 86.2
FAN10G4190 Fragaria x ananassa HOM05D000122 ORTHO05D000139 7.7e-06 54.7 29 86.2
PGR142G4141 Punica granatum HOM05D000553 ORTHO05D000460 7.7e-06 54.7 29 86.2
SalBow4G0546 Salvia bowleyana HOM05D000553 ORTHO05D000460 7.7e-06 54.7 29 82.8


User provided reference genes

Program Settings