Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p56650 Brassica napus HOM05D006633 ORTHO05D008259 1.5e-161 572.8 293 100.0
BraA03t14735Z Brassica rapa HOM05D006633 ORTHO05D008259 6.0e-158 560.8 295 98.3
C07p54850 Brassica napus HOM05D006633 ORTHO05D008259 9.0e-154 547.0 295 95.3
BcaC06g32755 Brassica carinata HOM05D006633 ORTHO05D008259 9.9e-153 543.5 295 94.9
Sp7g24290 Schrenkiella parvula HOM05D006633 ORTHO05D008259 1.0e-144 516.9 301 89.0
BraA01t01713Z Brassica rapa HOM05D006633 ORTHO05D008259 1.9e-143 512.7 298 89.3
BcaNung02426 Brassica carinata HOM05D006633 ORTHO05D008259 2.7e-142 508.8 296 88.9
Thhalv10025833m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 4.6e-142 508.1 303 87.8
AL7G26590 Arabidopsis lyrata HOM05D006633 ORTHO05D008259 1.0e-141 506.9 302 87.7
C01p22200 Brassica napus HOM05D006633 ORTHO05D008259 1.0e-141 506.9 298 87.6
BolC1t02150H Brassica oleracea HOM05D006633 ORTHO05D008259 1.0e-141 506.9 298 87.6
A01p17600 Brassica napus HOM05D006633 ORTHO05D008259 3.9e-141 505.0 298 87.6
AT4G26370 Arabidopsis thaliana HOM05D006633 ORTHO05D008259 4.3e-140 501.5 303 86.5
Carub.0007s1458 Capsella rubella HOM05D006633 ORTHO05D008259 8.2e-139 497.3 303 86.5
BcaC09g50693 Brassica carinata HOM05D006633 ORTHO05D008259 8.5e-136 487.3 304 83.9
CARHR233930 Cardamine hirsuta HOM05D006633 ORTHO05D008259 1.4e-135 486.5 302 85.1
Aa31LG5G11730 Aethionema arabicum HOM05D006633 ORTHO05D008259 1.8e-122 443.0 309 76.4
THA.LOC104813477 Tarenaya hassleriana HOM05D006633 ORTHO05D008259 2.8e-115 419.1 312 71.5
Thhalv10026040m.g Eutrema salsugineum HOM05D006633 ORTHO05D008259 3.7e-99 365.5 222 86.0
BcaC06g32753 Brassica carinata HOM05D006633 ORTHO05D008259 2.7e-97 359.4 221 85.5
TWI34G2025 Tripterygium wilfordii HOM05D006633 ORTHO05D008259 2.8e-94 349.4 291 64.3
Prupe.6G001800 Prunus persica HOM05D006633 ORTHO05D008259 5.2e-93 345.1 302 61.3
Manes.17G052500 Manihot esculenta HOM05D006633 ORTHO05D008259 2.0e-92 343.2 313 60.1
Cpa.g.sc119.27 Carica papaya HOM05D006633 ORTHO05D008259 4.4e-92 342.0 246 70.7
Oeu060898.1 Olea europaea HOM05D006633 ORTHO05D008259 3.7e-91 339.0 246 69.9
CANSAT11G1927 Cannabis sativa HOM05D006633 ORTHO05D008259 6.3e-91 338.2 296 62.5
COL.COLO4_35074 Corchorus olitorius HOM05D006633 ORTHO05D008259 6.3e-91 338.2 217 76.5
Potri.003G222900 Populus trichocarpa HOM05D006633 ORTHO05D008259 6.3e-91 338.2 218 76.6
CiPaw.13G178900 Carya illinoinensis HOM05D006633 ORTHO05D008259 3.1e-90 335.9 215 75.8
Sabra03G0165800 Salix brachista HOM05D006633 ORTHO05D008259 7.0e-90 334.7 218 76.1
Atru.chr3.2065 Acer truncatum HOM05D006633 ORTHO05D008259 9.2e-90 334.3 228 73.2
HanXRQChr14g0437151 Helianthus annuus HOM05D006633 ORTHO05D008259 9.2e-90 334.3 260 65.8
Thecc.09G197800 Theobroma cacao HOM05D006633 ORTHO05D008259 1.2e-89 334.0 288 62.5
Ciclev10015880m.g Citrus clementina HOM05D006633 ORTHO05D008259 1.6e-89 333.6 215 76.7
MD11G1001800 Malus domestica HOM05D006633 ORTHO05D008259 1.6e-89 333.6 301 62.1
GSVIVG01025500001 Vitis vinifera HOM05D006633 ORTHO05D008259 1.6e-89 333.6 215 75.8
Nn7g35825 Nelumbo nucifera HOM05D006633 ORTHO05D008259 4.5e-89 332.0 294 59.9
Lsat_1_v5_gn_2_51040 Lactuca sativa HOM05D006633 ORTHO05D008259 5.9e-89 331.6 300 60.7
PGR102G1790 Punica granatum HOM05D006633 ORTHO05D008259 5.9e-89 331.6 287 62.0
Sopen01g017000 Solanum pennellii HOM05D006633 ORTHO05D008259 5.9e-89 331.6 275 63.6
Gohir.D08G024900 Gossypium hirsutum HOM05D006633 ORTHO05D008259 1.0e-88 330.9 286 63.3
TAR633G1699 Trochodendron aralioides HOM05D006633 ORTHO05D008259 1.7e-88 330.1 295 61.7
Cc01_g00320 Coffea canephora HOM05D006633 ORTHO05D008259 2.3e-88 329.7 199 78.4
CAN.G431.4 Capsicum annuum HOM05D006633 ORTHO05D008259 3.9e-88 328.9 278 62.9
Gorai.004G020300 Gossypium raimondii HOM05D006633 ORTHO05D008259 3.9e-88 328.9 286 62.9
ECA238G0103 Erigeron canadensis HOM05D006633 ORTHO05D008259 6.6e-88 328.2 255 64.7
Duzib168G0472 Durio zibethinus HOM05D006633 ORTHO05D008259 1.1e-87 327.4 217 74.7
Solyc01g028870.3 Solanum lycopersicum HOM05D006633 ORTHO05D008259 1.1e-87 327.4 275 62.5
Actinidia00914 Actinidia chinensis HOM05D006633 ORTHO05D008259 1.5e-87 327.0 278 62.2
Gohir.A08G014400 Gossypium hirsutum HOM05D006633 ORTHO05D008259 1.5e-87 327.0 283 61.8
Lj2A793G3 Lonicera japonica HOM05D006633 ORTHO05D008259 1.9e-87 326.6 209 76.6
QL01p010451 Quercus lobata HOM05D006633 ORTHO05D008259 2.5e-87 326.2 237 70.9
Eucgr.B03588 Eucalyptus grandis HOM05D006633 ORTHO05D008259 4.3e-87 325.5 311 58.2
FAN21G1569 Fragaria x ananassa HOM05D006633 ORTHO05D008259 5.6e-87 325.1 268 63.8
Actinidia16230 Actinidia chinensis HOM05D006633 ORTHO05D008259 1.2e-86 323.9 228 69.7
RcHm_v2.0_Chr5g0084001 Rosa chinensis HOM05D006633 ORTHO05D008259 1.6e-86 323.6 285 62.5
FAN11G3357 Fragaria x ananassa HOM05D006633 ORTHO05D008259 2.1e-86 323.2 268 63.8
FAN16G0253 Fragaria x ananassa HOM05D006633 ORTHO05D008259 2.8e-86 322.8 303 59.7
SGA_v2.0_scaffold3G01722 Striga asiatica HOM05D000412 ORTHO05D000429 5.2e-85 318.5 199 75.4
Nitab4.5_0000075g0280 Nicotiana tabacum HOM05D006633 ORTHO05D008259 6.8e-85 318.2 288 58.7
Nitab4.5_0008322g0010 Nicotiana tabacum HOM05D006633 ORTHO05D008259 6.8e-85 318.2 275 61.1
PSO384G1804 Papaver somniferum HOM05D006633 ORTHO05D008259 1.5e-84 317.0 215 70.2
PSO339G0565 Papaver somniferum HOM05D006633 ORTHO05D008259 2.0e-84 316.6 230 67.4
Ca_18789_v3 Cicer arietinum L. HOM05D006633 ORTHO05D008259 3.4e-84 315.8 283 60.4
Migut.D02577 Erythranthe guttata HOM05D006633 ORTHO05D008259 4.4e-84 315.5 229 67.7
Sed0023197 Sechium edule HOM05D006633 ORTHO05D008259 9.8e-84 314.3 232 69.0
MELO3C014730.2 Cucumis melo HOM05D006633 ORTHO05D008259 1.7e-83 313.5 242 65.7
CsaV3_4G017570 Cucumis sativus L. HOM05D006633 ORTHO05D008259 1.7e-83 313.5 199 75.9
Rhsim13G0234200 Rhododendron simsii HOM05D006633 ORTHO05D008259 1.7e-83 313.5 218 71.1
SalBow2G0284 Salvia bowleyana HOM05D006633 ORTHO05D008259 1.1e-82 310.8 227 67.8
Phvul.002G101000 Phaseolus vulgaris HOM05D006633 ORTHO05D008259 4.1e-82 308.9 280 58.2
Lalb_Chr09g0328921 Lupinus albus HOM05D006633 ORTHO05D008259 1.0e-80 304.3 286 58.0
Glyma.20G024400 Glycine max HOM05D006633 ORTHO05D008259 3.9e-80 302.4 290 55.5
Aqoxy2G00572 Aquilegia oxysepala HOM05D006633 ORTHO05D008259 1.9e-79 300.1 259 59.5
Glyma.07G224400 Glycine max HOM05D006633 ORTHO05D008259 1.9e-79 300.1 289 57.4
MSTRG.18887 Avicennia marina HOM05D006633 ORTHO05D008259 4.3e-79 298.9 199 72.4
Haze_22925 Corylus avellana HOM05D006633 ORTHO05D008259 4.3e-79 298.9 238 63.9
arahy.Tifrunner.gnm1.ann1.B7F07X Arachis hypogaea HOM05D006633 ORTHO05D008259 7.3e-79 298.1 262 61.1
Peaxi162Scf00186g01010 Petunia axillaris HOM05D006633 ORTHO05D008259 8.0e-78 294.7 284 58.1
Psat7g133240 Pisum sativum HOM05D006633 ORTHO05D008259 5.2e-77 292.0 288 56.2
ATR0697G106 Amborella trichopoda HOM05D006633 ORTHO05D008259 2.0e-76 290.0 274 58.4
DCAR_001964 Daucus carota HOM05D006633 ORTHO05D008259 2.0e-76 290.0 286 56.6
Lj4g0000825 Lotus japonicus HOM05D006633 ORTHO05D008259 5.8e-76 288.5 199 68.3
Hund16643 Selenicereus undatus HOM05D006633 ORTHO05D008259 8.3e-75 284.6 220 63.6
HPP92_027714 Vanilla planifolia HOM05D006633 ORTHO05D008259 1.7e-72 276.9 216 63.0
Os03g0656900 Oryza sativa ssp. japonica HOM05D006633 ORTHO05D008259 1.5e-71 273.9 212 64.2
Ah.01g020780 Amaranthus hybridus HOM05D006633 ORTHO05D008259 2.1e-70 270.0 218 61.0
Sc22g0000060 Simmondsia chinensis HOM05D006633 ORTHO05D008259 6.2e-70 268.5 178 71.9
AUR62011548 Chenopodium quinoa HOM05D006633 ORTHO05D008259 1.8e-69 266.9 201 65.7
VMungo0251G3366 Vigna mungo HOM05D006633 ORTHO05D008259 1.3e-67 260.8 256 56.2
Medtr4g083370 Medicago truncatula HOM05D006633 ORTHO05D008259 7.1e-66 255.0 271 53.5
TPR.G34055 Trifolium pratense HOM05D006633 ORTHO05D008259 1.2e-65 254.2 177 68.4
arahy.Tifrunner.gnm1.ann1.UCUG5X Arachis hypogaea HOM05D006633 ORTHO05D008259 4.6e-65 252.3 245 54.3
Sc11g0009420 Simmondsia chinensis HOM05D006633 ORTHO05D008259 3.9e-64 249.2 172 69.8
FvH4_3g45910 Fragaria vesca HOM05D006633 ORTHO05D008259 5.8e-60 235.3 217 57.6
unitig_22.g5858 Utricularia gibba HOM05D006633 ORTHO05D008259 5.8e-60 235.3 197 59.9
FAN25G3644 Fragaria x ananassa HOM05D006633 ORTHO05D008259 5.6e-55 218.8 235 52.3
Hma1.2p1_2123F.1_g314533 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 9.0e-53 211.5 155 69.7
Zm00001eb052690 Zea mays HOM05D006633 ORTHO05D008259 7.1e-50 201.8 211 53.6
vmacro04274 Vaccinium macrocarpon HOM05D006633 ORTHO05D008259 8.4e-43 178.3 149 59.7
SMO228G0116 Selaginella moellendorffii HOM05D006633 ORTHO05D008259 1.0e-40 171.4 199 44.2
Pp3c10_23950 Physcomitrium patens HOM05D006633 ORTHO05D008259 1.2e-36 157.9 213 42.3
Zm00001eb218200 Zea mays HOM05D006633 ORTHO05D008259 1.6e-33 147.5 109 64.2
CSS0002459 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 3.5e-33 146.4 103 68.0
CSS0031986 Camellia sinensis var. sinensis HOM05D006633 ORTHO05D008259 1.0e-32 144.8 155 53.5
ClCG02G024430 Citrullus lanatus HOM05D006633 ORTHO05D008259 5.1e-32 142.5 94 74.5
Hund09324 Selenicereus undatus HOM05D006633 ORTHO05D008259 3.3e-31 139.8 81 76.5
Mapoly0006s0155 Marchantia polymorpha HOM05D006633 ORTHO05D008259 1.3e-30 137.9 209 37.3
EL10Ac9g21929 Beta vulgaris HOM05D006633 ORTHO05D008259 2.9e-27 126.7 91 65.9
HanXRQChr15g0489901 Helianthus annuus HOM05D006633 ORTHO05D008259 1.0e-24 118.2 77 71.4
AUR62016367 Chenopodium quinoa HOM05D006633 ORTHO05D008259 4.3e-23 112.8 91 58.2
Hma1.2p1_1877F.1_g306330 Hydrangea macrophylla HOM05D006633 ORTHO05D008259 8.2e-22 108.6 144 45.8
CDE10G1061 Ceratophyllum demersum HOM05D006633 ORTHO05D008259 7.2e-18 95.5 68 64.7
HanXRQChr11g0336181 Helianthus annuus HOM05D006633 ORTHO05D008259 9.4e-18 95.1 72 63.9
COL.COLO4_37952 Corchorus olitorius HOM05D006633 ORTHO05D008259 5.1e-16 89.4 58 74.1
CDE10G0014 Ceratophyllum demersum HOM05D006633 ORTHO05D008259 6.7e-16 89.0 61 70.5
HanXRQChr02g0032931 Helianthus annuus HOM05D006633 ORTHO05D008259 6.7e-16 89.0 60 66.7
SEGI_24744 Sequoiadendron giganteum HOM05D006633 ORTHO05D008259 1.1e-15 88.2 74 55.4
SEGI_20653 Sequoiadendron giganteum HOM05D006633 ORTHO05D008259 2.1e-09 67.4 57 57.9
AagrBONN_evm.TU.Sc2ySwM_117.296 Anthoceros agrestis HOM05D006633 ORTHO05D008259 3.0e-08 63.5 88 36.4


User provided reference genes

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