Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p56200 Brassica napus HOM05D002831 ORTHO05D010484 1.9e-53 212.2 105 100.0
BraA03t14690Z Brassica rapa HOM05D002831 ORTHO05D010484 1.9e-53 212.2 105 100.0
BolC7t45935H Brassica oleracea HOM05D002831 ORTHO05D010484 5.9e-31 137.5 98 77.6
BolC1t02047H Brassica oleracea HOM05D002831 ORTHO05D010484 1.4e-19 99.8 51 90.2
BraA01t01646Z Brassica rapa HOM05D002831 ORTHO05D010484 1.4e-19 99.8 51 90.2
BolC1t02050H Brassica oleracea HOM05D002831 ORTHO05D010484 1.8e-19 99.4 53 86.8
BraA01t01649Z Brassica rapa HOM05D002831 ORTHO05D010484 2.3e-19 99.0 53 86.8
CARHR233120 Cardamine hirsuta HOM05D002831 ORTHO05D010484 4.1e-16 88.2 53 77.4
BcaNung07307 Brassica carinata HOM05D002831 ORTHO05D004341 2.9e-14 82.0 43 88.4
Carub.0007s1529 Capsella rubella HOM05D002831 ORTHO05D010484 3.2e-13 78.6 53 71.7
Carub.0008s1269 Capsella rubella HOM05D002831 ORTHO05D010484 1.2e-12 76.6 53 67.9
CARHR233140 Cardamine hirsuta HOM05D002831 ORTHO05D010484 2.1e-12 75.9 54 68.5
MD07G1278600 Malus domestica HOM05D002831 ORTHO05D010484 3.0e-11 72.0 54 61.1
CiPaw.06G003400 Carya illinoinensis HOM05D002831 ORTHO05D010484 8.8e-11 70.5 55 58.2
MD01G1208000 Malus domestica HOM05D002831 ORTHO05D010484 1.2e-10 70.1 54 61.1
CiPaw.06G003200 Carya illinoinensis HOM05D002831 ORTHO05D010484 1.5e-10 69.7 53 60.4
Atru.ctg97_1.17 Acer truncatum HOM05D002831 ORTHO05D010484 3.4e-10 68.6 53 60.4
Gorai.004G117400 Gossypium raimondii HOM05D002831 ORTHO05D004341 3.4e-10 68.6 52 59.6
Manes.06G152150 Manihot esculenta HOM05D002831 ORTHO05D010484 4.4e-10 68.2 53 58.5
Prupe.2G300500 Prunus persica HOM05D002831 ORTHO05D010484 4.4e-10 68.2 53 60.4
Potri.004G080000 Populus trichocarpa HOM05D002831 ORTHO05D010484 5.7e-10 67.8 53 58.5
Thecc.03G183800 Theobroma cacao HOM05D002831 ORTHO05D010484 9.8e-10 67.0 53 58.5
Manes.14G022900 Manihot esculenta HOM05D002831 ORTHO05D010484 1.7e-09 66.2 53 56.6
Glyma.09G132600 Glycine max HOM05D002831 ORTHO05D010484 2.2e-09 65.9 51 58.8
Glyma.16G179250 Glycine max HOM05D002831 ORTHO05D010484 2.2e-09 65.9 51 58.8
Prupe.7G027400 Prunus persica HOM05D002831 ORTHO05D010484 2.2e-09 65.9 51 58.8
arahy.Tifrunner.gnm1.ann1.VWVY78 Arachis hypogaea HOM05D002831 ORTHO05D010484 2.8e-09 65.5 52 57.7
ClCG05G008350 Citrullus lanatus HOM05D002831 ORTHO05D010484 6.3e-09 64.3 81 44.4
Sabra04G0053100 Salix brachista HOM05D002831 ORTHO05D004341 6.3e-09 64.3 93 41.9
Peaxi162Scf00444g00118 Petunia axillaris HOM05D002831 ORTHO05D010484 8.3e-09 63.9 66 48.5
Glyma.20G162551 Glycine max HOM05D002831 ORTHO05D010484 1.1e-08 63.5 53 56.6
Glyma.10G231251 Glycine max HOM05D002831 ORTHO05D010484 1.4e-08 63.2 53 56.6
Gohir.D11G011200 Gossypium hirsutum HOM05D002831 ORTHO05D010484 1.4e-08 63.2 53 54.7
Potri.017G143300 Populus trichocarpa HOM05D002831 ORTHO05D010484 1.4e-08 63.2 53 54.7
Gohir.A11G012000 Gossypium hirsutum HOM05D002831 ORTHO05D010484 1.8e-08 62.8 53 54.7
Nitab4.5_0003825g0100 Nicotiana tabacum HOM05D002831 ORTHO05D010484 1.8e-08 62.8 51 56.9
A02p11710 Brassica napus HOM05D002831 ORTHO05D010484 2.4e-08 62.4 58 46.6
Gohir.D09G177300 Gossypium hirsutum HOM05D002831 ORTHO05D010484 4.1e-08 61.6 53 54.7
Gorai.006G199300 Gossypium raimondii HOM05D002831 ORTHO05D010484 5.4e-08 61.2 53 52.8
Carub.0007s1526 Capsella rubella HOM05D002831 ORTHO05D010484 9.2e-08 60.5 47 61.7
GSVIVG01028866001 Vitis vinifera HOM05D002831 ORTHO05D010484 1.2e-07 60.1 52 51.9
Nn1g01626 Nelumbo nucifera HOM05D002831 ORTHO05D010484 2.0e-07 59.3 53 52.8
Cc02_g02410 Coffea canephora HOM05D002831 ORTHO05D010484 4.5e-07 58.2 52 53.8
vmacro06629 Vaccinium macrocarpon HOM05D002831 ORTHO05D004341 4.5e-07 58.2 52 50.0
Gohir.A12G255400 Gossypium hirsutum HOM05D002831 ORTHO05D010484 5.9e-07 57.8 53 52.8
Gohir.D12G256800 Gossypium hirsutum HOM05D002831 ORTHO05D010484 5.9e-07 57.8 53 52.8
Gorai.008G275000 Gossypium raimondii HOM05D002831 ORTHO05D010484 5.9e-07 57.8 53 52.8
FAN06G3328 Fragaria x ananassa HOM05D002831 ORTHO05D004341 1.3e-06 56.6 48 56.2
Lalb_Chr02g0141241 Lupinus albus HOM05D002831 ORTHO05D010484 2.3e-06 55.8 51 52.9
Migut.F00296 Erythranthe guttata HOM05D002831 ORTHO05D004341 2.9e-06 55.5 47 53.2
CAN.G126.13 Capsicum annuum HOM05D002831 ORTHO05D010484 3.8e-06 55.1 52 51.9
FAN03G0192 Fragaria x ananassa HOM05D002831 ORTHO05D010484 3.8e-06 55.1 55 52.7
Nitab4.5_0000084g0420 Nicotiana tabacum HOM05D002831 ORTHO05D010484 3.8e-06 55.1 75 40.0
CSS0001563 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D010484 5.0e-06 54.7 53 47.2
CSS0038907 Camellia sinensis var. sinensis HOM05D002831 ORTHO05D010484 5.0e-06 54.7 53 47.2
Dinv35249 Davidia involucrata HOM05D002831 ORTHO05D004341 5.0e-06 54.7 45 57.8
SGA_v2.0_scaffold60G21104 Striga asiatica HOM05D002831 ORTHO05D004341 6.6e-06 54.3 47 48.9


User provided reference genes

Program Settings