Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p55890 Brassica napus HOM05D006227 ORTHO05D007714 1.2e-58 229.6 109 100.0
BraA03t14660Z Brassica rapa HOM05D006227 ORTHO05D007714 1.8e-54 215.7 131 82.4
BcaC06g32822 Brassica carinata HOM05D006227 ORTHO05D007714 3.9e-54 214.5 109 91.7
CARHR232720 Cardamine hirsuta HOM05D006227 ORTHO05D007714 1.1e-53 213.0 109 90.8
Sp7g23330 Schrenkiella parvula HOM05D006227 ORTHO05D007714 2.6e-53 211.8 107 92.5
C07p54180 Brassica napus HOM05D006227 ORTHO05D007714 3.3e-53 211.5 109 89.9
BcaNung06163 Brassica carinata HOM05D006227 ORTHO05D007714 8.2e-52 206.8 109 89.9
AT4G25315 Arabidopsis thaliana HOM05D006227 ORTHO05D007714 3.4e-50 201.4 107 86.9
Carub.0007s1570 Capsella rubella HOM05D006227 ORTHO05D007714 4.5e-50 201.1 107 87.9
A01p16610 Brassica napus HOM05D006227 ORTHO05D007714 1.3e-49 199.5 126 79.4
BolC7t45904H Brassica oleracea HOM05D006227 ORTHO05D007714 1.3e-49 199.5 126 77.0
BraA01t01616Z Brassica rapa HOM05D006227 ORTHO05D007714 1.3e-49 199.5 126 79.4
Carub.0008s1058 Capsella rubella HOM05D006227 ORTHO05D007714 8.5e-49 196.8 106 85.8
C01p20840 Brassica napus HOM05D006227 ORTHO05D007714 9.4e-48 193.4 126 76.2
AL7G27820 Arabidopsis lyrata HOM05D006227 ORTHO05D007714 2.1e-47 192.2 126 75.4
Aa31sc16G160 Aethionema arabicum HOM05D006227 ORTHO05D007714 4.5e-42 174.5 123 69.1
THA.LOC104799532 Tarenaya hassleriana HOM05D006227 ORTHO05D007714 2.1e-39 165.6 107 72.0
BolC1t02011H Brassica oleracea HOM05D006227 ORTHO05D007714 5.3e-35 151.0 126 63.5
Thhalv10026551m.g Eutrema salsugineum HOM05D006227 ORTHO05D007714 4.5e-34 147.9 79 84.8
Dinv29415 Davidia involucrata HOM05D006227 ORTHO05D007714 5.0e-33 144.4 105 62.9
Migut.D02328 Erythranthe guttata HOM05D006227 ORTHO05D007714 6.5e-33 144.1 105 63.8
Duzib170G0407 Durio zibethinus HOM05D006227 ORTHO05D007714 1.5e-32 142.9 105 66.7
Hma1.2p1_0051F.1_g029840 Hydrangea macrophylla HOM05D006227 ORTHO05D007714 4.2e-32 141.4 105 62.9
Ciclev10029628m.g Citrus clementina HOM05D006227 ORTHO05D007714 5.5e-32 141.0 105 62.9
Thecc.09G292900 Theobroma cacao HOM05D006227 ORTHO05D007714 1.2e-31 139.8 105 62.9
Dinv12530 Davidia involucrata HOM05D006227 ORTHO05D007714 1.6e-31 139.4 105 60.0
Oeu050173.1 Olea europaea HOM05D006227 ORTHO05D007714 1.6e-31 139.4 104 63.5
Prupe.6G117700 Prunus persica HOM05D006227 ORTHO05D007714 1.6e-31 139.4 105 61.9
Sed0008116 Sechium edule HOM05D006227 ORTHO05D007714 1.6e-31 139.4 108 61.1
MSTRG.18723 Avicennia marina HOM05D006227 ORTHO05D007714 2.1e-31 139.0 105 61.0
vmacro14378 Vaccinium macrocarpon HOM05D006227 ORTHO05D007714 3.6e-31 138.3 105 59.0
MELO3C004803.2 Cucumis melo HOM05D006227 ORTHO05D007714 4.7e-31 137.9 106 60.4
Eucgr.J00418 Eucalyptus grandis HOM05D006227 ORTHO05D007714 4.7e-31 137.9 105 60.0
Potri.004G189300 Populus trichocarpa HOM05D006227 ORTHO05D007714 8.0e-31 137.1 98 62.2
Actinidia07213 Actinidia chinensis HOM05D006227 ORTHO05D007714 1.8e-30 136.0 105 58.1
RcHm_v2.0_Chr5g0055601 Rosa chinensis HOM05D006227 ORTHO05D007714 2.3e-30 135.6 105 61.0
MSTRG.21069 Avicennia marina HOM05D006227 ORTHO05D007714 3.0e-30 135.2 105 59.0
CSS0048767 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 4.0e-30 134.8 105 59.0
CsaV3_1G014480 Cucumis sativus L. HOM05D006227 ORTHO05D007714 4.0e-30 134.8 102 58.8
Manes.11G155900 Manihot esculenta HOM05D006227 ORTHO05D007714 4.0e-30 134.8 105 61.9
Atru.chr3.3392 Acer truncatum HOM05D006227 ORTHO05D007714 8.8e-30 133.7 104 61.5
Cc01_g09910 Coffea canephora HOM05D006227 ORTHO05D007714 1.5e-29 132.9 105 58.1
Phvul.002G218500 Phaseolus vulgaris HOM05D006227 ORTHO05D007714 1.5e-29 132.9 106 57.5
SGA_v2.0_scaffold45G17093 Striga asiatica HOM05D006227 ORTHO05D007714 1.5e-29 132.9 105 57.1
EL10Ac9g21059 Beta vulgaris HOM05D006227 ORTHO05D007714 2.0e-29 132.5 99 58.6
CiPaw.13G141700 Carya illinoinensis HOM05D006227 ORTHO05D007714 2.6e-29 132.1 106 59.4
Gohir.D09G092300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 2.6e-29 132.1 104 60.6
Gorai.006G108900 Gossypium raimondii HOM05D006227 ORTHO05D007714 2.6e-29 132.1 104 60.6
GSVIVG01023006001 Vitis vinifera HOM05D006227 ORTHO05D007714 2.6e-29 132.1 107 58.9
Lalb_Chr09g0327121 Lupinus albus HOM05D006227 ORTHO05D007714 3.4e-29 131.7 109 57.8
SalBow5G0633 Salvia bowleyana HOM05D006227 ORTHO05D007714 3.4e-29 131.7 105 59.0
SalBow5G1351 Salvia bowleyana HOM05D006227 ORTHO05D007714 3.4e-29 131.7 105 59.0
Sc06g0007110 Simmondsia chinensis HOM05D006227 ORTHO05D007714 4.4e-29 131.3 101 58.4
TAR623G1401 Trochodendron aralioides HOM05D006227 ORTHO05D007714 4.4e-29 131.3 101 59.4
Ca_18451_v3 Cicer arietinum L. HOM05D006227 ORTHO05D007714 7.5e-29 130.6 107 56.1
VMungo0251G3527 Vigna mungo HOM05D006227 ORTHO05D007714 7.5e-29 130.6 105 58.1
Duzib168G0197 Durio zibethinus HOM05D006227 ORTHO05D007714 9.8e-29 130.2 105 58.1
ClCG01G012780 Citrullus lanatus HOM05D006227 ORTHO05D007714 1.3e-28 129.8 102 56.9
ECA238G2178 Erigeron canadensis HOM05D006227 ORTHO05D007714 1.3e-28 129.8 106 59.4
Glyma.07G187100 Glycine max HOM05D006227 ORTHO05D007714 1.3e-28 129.8 107 53.3
Sc12g0004090 Simmondsia chinensis HOM05D006227 ORTHO05D007714 1.3e-28 129.8 102 56.9
Gohir.A03G000008 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.7e-28 129.4 104 59.6
CAN.G170.132 Capsicum annuum HOM05D006227 ORTHO05D007714 2.2e-28 129.0 105 60.0
Rhsim01G0209000 Rhododendron simsii HOM05D006227 ORTHO05D007714 2.2e-28 129.0 125 51.2
TPR.G13925 Trifolium pratense HOM05D006227 ORTHO05D007714 2.2e-28 129.0 107 55.1
CANSAT54G1955 Cannabis sativa HOM05D006227 ORTHO05D007714 2.8e-28 128.6 97 57.7
Solyc01g086860.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 3.7e-28 128.3 105 59.0
Gohir.A04G148400 Gossypium hirsutum HOM05D006227 ORTHO05D007714 4.8e-28 127.9 104 58.7
Nitab4.5_0002781g0010 Nicotiana tabacum HOM05D006227 ORTHO05D007714 4.8e-28 127.9 105 60.0
Psat7g105560 Pisum sativum HOM05D006227 ORTHO05D007714 4.8e-28 127.9 107 57.0
Gorai.006G108700 Gossypium raimondii HOM05D006227 ORTHO05D007714 1.1e-27 126.7 104 58.7
Sopen01g033870 Solanum pennellii HOM05D006227 ORTHO05D007714 1.1e-27 126.7 105 58.1
ATR0712G069 Amborella trichopoda HOM05D006227 ORTHO05D007714 1.4e-27 126.3 98 58.2
Gohir.A09G092200 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.4e-27 126.3 104 58.7
arahy.Tifrunner.gnm1.ann1.U4LPMY Arachis hypogaea HOM05D006227 ORTHO05D007714 1.8e-27 125.9 102 55.9
CDE02G3751 Ceratophyllum demersum HOM05D006227 ORTHO05D007714 2.4e-27 125.6 101 56.4
Psat7g105760 Pisum sativum HOM05D006227 ORTHO05D007714 4.1e-27 124.8 107 56.1
DCAR_015484 Daucus carota HOM05D006227 ORTHO05D007714 5.4e-27 124.4 108 57.4
Medtr3g014200 Medicago truncatula HOM05D006227 ORTHO05D007714 7.0e-27 124.0 107 54.2
MD14G1038500 Malus domestica HOM05D006227 ORTHO05D007714 9.1e-27 123.6 105 55.2
Solyc01g112370.3 Solanum lycopersicum HOM05D006227 ORTHO05D007714 1.6e-26 122.9 105 58.1
Medtr4g092090 Medicago truncatula HOM05D006227 ORTHO05D007714 2.0e-26 122.5 107 53.3
arahy.Tifrunner.gnm1.ann1.ME5340 Arachis hypogaea HOM05D006227 ORTHO05D007714 1.0e-25 120.2 105 54.3
FvH4_3g30110 Fragaria vesca HOM05D006227 ORTHO05D007714 1.3e-25 119.8 97 57.7
Gohir.A08G253700 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.7e-25 119.4 104 55.8
TWI56G0405 Tripterygium wilfordii HOM05D006227 ORTHO05D007714 2.9e-25 118.6 105 55.2
Gohir.D09G092100 Gossypium hirsutum HOM05D006227 ORTHO05D007714 1.1e-24 116.7 108 54.6
Mapoly0046s0116 Marchantia polymorpha HOM05D006227 ORTHO05D007714 1.9e-24 115.9 100 49.0
Pp3c23_15340 Physcomitrium patens HOM05D006227 ORTHO05D007714 7.2e-24 114.0 92 57.6
FAN16G3386 Fragaria x ananassa HOM05D006227 ORTHO05D007714 1.2e-23 113.2 106 53.8
Os09g0516800 Oryza sativa ssp. japonica HOM05D006227 ORTHO05D007714 1.6e-23 112.8 90 57.8
QL01p013949 Quercus lobata HOM05D006227 ORTHO05D007714 2.8e-23 112.1 174 39.1
Gohir.A10G243300 Gossypium hirsutum HOM05D006227 ORTHO05D007714 3.6e-23 111.7 91 56.0
HPP92_003486 Vanilla planifolia HOM05D006227 ORTHO05D007714 6.1e-23 110.9 94 55.3
SEGI_33746 Sequoiadendron giganteum HOM05D006227 ORTHO05D007714 1.8e-22 109.4 99 51.5
CSS0049374 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 3.0e-22 108.6 112 48.2
PSO339G0999 Papaver somniferum HOM05D006227 ORTHO05D007714 4.0e-22 108.2 92 54.3
Hund07714 Selenicereus undatus HOM05D006227 ORTHO05D007714 6.8e-22 107.5 142 41.5
AagrBONN_evm.TU.Sc2ySwM_228.5102 Anthoceros agrestis HOM05D006227 ORTHO05D007714 1.2e-21 106.7 101 47.5
HPP92_026884 Vanilla planifolia HOM05D006227 ORTHO05D007714 1.2e-21 106.7 94 54.3
Zm00001eb314390 Zea mays HOM05D006227 ORTHO05D007714 2.6e-21 105.5 95 53.7
Peaxi162Scf00428g01022 Petunia axillaris HOM05D006227 ORTHO05D007714 6.3e-20 100.9 81 58.0
Nitab4.5_0001542g0090 Nicotiana tabacum HOM05D006227 ORTHO05D007714 3.1e-19 98.6 77 59.7
Nitab4.5_0006850g0030 Nicotiana tabacum HOM05D006227 ORTHO05D007714 7.0e-19 97.4 77 59.7
PGR119G0591 Punica granatum HOM05D006227 ORTHO05D007714 1.6e-18 96.3 75 60.0
HanXRQChr07g0197671 Helianthus annuus HOM05D006227 ORTHO05D007714 3.5e-18 95.1 77 57.1
Duzib170G0945 Durio zibethinus HOM05D006227 ORTHO05D007714 1.0e-17 93.6 77 55.8
DCAR_018745 Daucus carota HOM05D006227 ORTHO05D007714 1.3e-17 93.2 77 57.1
Lalb_Chr16g0383271 Lupinus albus HOM05D006227 ORTHO05D007714 1.3e-17 93.2 78 57.7
AUR62036497 Chenopodium quinoa HOM05D006227 ORTHO05D007714 1.7e-17 92.8 103 47.6
CSS0004675 Camellia sinensis var. sinensis HOM05D006227 ORTHO05D007714 2.9e-17 92.0 70 57.1
AUR62037073 Chenopodium quinoa HOM05D006227 ORTHO05D007714 5.0e-17 91.3 103 46.6
Lj4g0025300 Lotus japonicus HOM05D006227 ORTHO05D007714 5.0e-17 91.3 81 50.6
SMO144G0106 Selaginella moellendorffii HOM05D006227 ORTHO05D007714 1.1e-16 90.1 97 41.2
Nn6g35079 Nelumbo nucifera HOM05D006227 ORTHO05D007714 2.5e-16 89.0 55 67.3
unitig_899.g15369 Utricularia gibba HOM05D006227 ORTHO05D007714 5.6e-16 87.8 72 56.9
PGSC0003DMG400025251 Solanum tuberosum HOM05D006227 ORTHO05D007714 7.3e-16 87.4 77 53.2
AUR62023956 Chenopodium quinoa HOM05D006227 ORTHO05D007714 2.1e-15 85.9 78 50.0
Aqoxy2G01473 Aquilegia oxysepala HOM05D006227 ORTHO05D007714 4.7e-15 84.7 73 54.8
FAN11G2712 Fragaria x ananassa HOM05D006227 ORTHO05D007714 6.1e-15 84.3 72 55.6
MBI01_g43174_MAGBIO Magnolia biondii HOM05D006227 ORTHO05D007714 1.3e-12 76.6 76 51.3
Oeu023727.1 Olea europaea HOM05D006227 ORTHO05D007714 2.9e-12 75.5 71 53.5
Manes.04G010000 Manihot esculenta HOM05D006227 ORTHO05D007714 1.1e-11 73.6 51 62.7
MCO03G239 Micromonas commoda HOM05D006227 ORTHO05D007714 3.3e-08 62.0 90 34.4
MD03G1133000 Malus domestica HOM05D006227 ORTHO05D007714 3.1e-06 55.5 40 60.0


User provided reference genes

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