Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p55480 Brassica napus HOM05D007505 ORTHO05D009476 1.6e-86 322.8 173 100.0
BraA03t14621Z Brassica rapa HOM05D000464 ORTHO05D000408 7.1e-82 307.4 173 91.3
BolC7t45867H Brassica oleracea HOM05D000464 ORTHO05D000408 1.1e-71 273.5 176 86.9
A01p16040 Brassica napus HOM05D006209 ORTHO05D007645 2.2e-46 189.5 149 77.9
BcaC09g50839 Brassica carinata HOM05D007505 ORTHO05D009476 2.4e-45 186.0 142 78.2
BcaNung07358 Brassica carinata HOM05D007505 ORTHO05D009476 2.4e-45 186.0 142 74.6
BraA01t01538Z Brassica rapa HOM05D007505 ORTHO05D009476 3.4e-44 182.2 143 77.6
C01p20030 Brassica napus HOM05D006209 ORTHO05D007645 1.3e-43 180.3 149 74.5
BolC1t01930H Brassica oleracea HOM05D006209 ORTHO05D007645 6.5e-43 177.9 150 74.7
BcaC06g32867 Brassica carinata HOM05D007505 ORTHO05D009476 3.6e-41 172.2 144 70.1
Thhalv10026466m.g Eutrema salsugineum HOM05D007505 ORTHO05D009476 8.8e-40 167.5 143 72.0
Carub.0007s1636 Capsella rubella HOM05D007505 ORTHO05D009476 3.7e-38 162.2 146 70.5
AL7G28500 Arabidopsis lyrata HOM05D007505 ORTHO05D009476 4.1e-37 158.7 144 68.1
AT4G24700 Arabidopsis thaliana HOM05D007505 ORTHO05D009476 3.4e-36 155.6 148 67.6
CARHR232080 Cardamine hirsuta HOM05D007505 ORTHO05D009476 1.4e-34 150.2 143 67.1
THA.LOC104800396 Tarenaya hassleriana HOM05D007505 ORTHO05D009476 1.3e-19 100.5 142 45.1
THA.LOC104800397 Tarenaya hassleriana HOM05D007505 ORTHO05D009476 1.3e-19 100.5 142 45.1
THA.LOC104825178 Tarenaya hassleriana HOM05D007505 ORTHO05D009476 3.8e-19 99.0 165 43.6
Migut.O00159 Erythranthe guttata HOM05D007505 ORTHO05D009476 1.8e-16 90.1 137 40.9
PGSC0003DMG400018186 Solanum tuberosum HOM05D007505 ORTHO05D009476 1.8e-16 90.1 120 42.5
Cc04_g11490 Coffea canephora HOM05D007505 ORTHO05D009476 2.3e-16 89.7 147 38.1
Sopen03g031290 Solanum pennellii HOM05D007505 ORTHO05D009476 2.3e-16 89.7 120 41.7
Nitab4.5_0010452g0040 Nicotiana tabacum HOM05D002460 ORTHO05D002716 3.0e-16 89.4 123 42.3
Prupe.5G165400 Prunus persica HOM05D007505 ORTHO05D009476 5.2e-16 88.6 126 40.5
Solyc03g112190.4 Solanum lycopersicum HOM05D002460 ORTHO05D002716 6.8e-16 88.2 148 38.5
DCAR_021591 Daucus carota HOM05D007505 ORTHO05D009476 1.2e-15 87.4 145 40.7
RcHm_v2.0_Chr7g0192551 Rosa chinensis HOM05D007505 ORTHO05D009476 2.0e-15 86.7 124 37.9
Oeu040858.1 Olea europaea HOM05D007505 ORTHO05D009476 3.4e-15 85.9 142 37.3
Oeu023645.1 Olea europaea HOM05D007505 ORTHO05D009476 4.4e-15 85.5 126 42.1
CAN.G338.34 Capsicum annuum HOM05D007505 ORTHO05D009476 7.5e-15 84.7 120 42.5
SalBow5G2951 Salvia bowleyana HOM05D007505 ORTHO05D009476 2.2e-14 83.2 120 44.2
Atru.chr9.2580 Acer truncatum HOM05D007505 ORTHO05D009476 3.7e-14 82.4 139 41.7
EL10Ac5g10655 Beta vulgaris HOM05D007505 ORTHO05D009476 3.7e-14 82.4 130 39.2
FvH4_5g06310 Fragaria vesca HOM05D007505 ORTHO05D009476 3.7e-14 82.4 125 36.8
AUR62028725 Chenopodium quinoa HOM05D007505 ORTHO05D009476 8.3e-14 81.3 126 38.9
ECA247G3499 Erigeron canadensis HOM05D007505 ORTHO05D009476 8.3e-14 81.3 128 36.7
FAN18G1005 Fragaria x ananassa HOM05D007505 ORTHO05D009476 8.3e-14 81.3 125 36.8
Medtr4g104870 Medicago truncatula HOM05D007505 ORTHO05D009476 8.3e-14 81.3 124 40.3
FAN08G0495 Fragaria x ananassa HOM05D007505 ORTHO05D009476 1.1e-13 80.9 125 36.8
MD14G1171300 Malus domestica HOM05D007505 ORTHO05D009476 1.4e-13 80.5 127 40.2
SGA_v2.0_scaffold90G27839 Striga asiatica HOM05D007505 ORTHO05D009476 1.4e-13 80.5 125 42.4
VMungo1215G0926 Vigna mungo HOM05D007505 ORTHO05D009476 1.4e-13 80.5 125 40.8
AUR62008143 Chenopodium quinoa HOM05D007505 ORTHO05D009476 1.8e-13 80.1 126 38.1
FAN13G2123 Fragaria x ananassa HOM05D007505 ORTHO05D009476 1.8e-13 80.1 125 36.0
PGR083G2149 Punica granatum HOM05D007505 ORTHO05D009476 2.4e-13 79.7 133 39.8
Sabra15G0107300 Salix brachista HOM05D007505 ORTHO05D009476 2.4e-13 79.7 126 38.9
Potri.015G084200 Populus trichocarpa HOM05D007505 ORTHO05D009476 3.1e-13 79.3 125 39.2
CANSAT80G2368 Cannabis sativa HOM05D007505 ORTHO05D009476 4.1e-13 79.0 165 31.5
MELO3C002298.2 Cucumis melo HOM05D007505 ORTHO05D009476 4.1e-13 79.0 126 39.7
Dinv38525 Davidia involucrata HOM05D007505 ORTHO05D009476 4.1e-13 79.0 145 37.9
COL.COLO4_36758 Corchorus olitorius HOM05D007505 ORTHO05D009476 5.4e-13 78.6 156 37.2
Cfa019219 Carpinus fangiana HOM05D007505 ORTHO05D009476 9.1e-13 77.8 121 37.2
HanXRQChr02g0035811 Helianthus annuus HOM05D007505 ORTHO05D009476 9.1e-13 77.8 125 36.8
Nitab4.5_0001793g0050 Nicotiana tabacum HOM05D002460 ORTHO05D002716 1.2e-12 77.4 114 41.2
ClCG03G003000 Citrullus lanatus HOM05D007505 ORTHO05D009476 1.6e-12 77.0 144 38.2
Peaxi162Scf00089g01341 Petunia axillaris HOM05D002460 ORTHO05D002716 1.6e-12 77.0 143 35.0
Cfa019221 Carpinus fangiana HOM05D007505 ORTHO05D009476 2.0e-12 76.6 121 37.2
Hma1.2p1_0046F.1_g027150 Hydrangea macrophylla HOM05D007505 ORTHO05D009476 2.0e-12 76.6 122 38.5
Manes.06G110400 Manihot esculenta HOM05D007505 ORTHO05D009476 2.0e-12 76.6 123 44.7
vmacro19295 Vaccinium macrocarpon HOM05D007505 ORTHO05D009476 2.0e-12 76.6 125 37.6
Aqoxy5G03745 Aquilegia oxysepala HOM05D007505 ORTHO05D009476 2.7e-12 76.3 123 39.0
Ciclev10022689m.g Citrus clementina HOM05D007505 ORTHO05D009476 2.7e-12 76.3 146 34.9
Glyma.05G041700 Glycine max HOM05D007505 ORTHO05D009476 2.7e-12 76.3 124 38.7
MD06G1165700 Malus domestica HOM05D007505 ORTHO05D009476 2.7e-12 76.3 122 38.5
PSO675G7842 Papaver somniferum HOM05D007505 ORTHO05D009476 2.7e-12 76.3 130 40.0
Glyma.17G084500 Glycine max HOM05D007505 ORTHO05D009476 3.5e-12 75.9 126 41.3
Gohir.A03G057100 Gossypium hirsutum HOM05D007505 ORTHO05D009476 3.5e-12 75.9 136 36.0
Potri.012G086000 Populus trichocarpa HOM05D007505 ORTHO05D009476 3.5e-12 75.9 143 36.4
PSO541G6268 Papaver somniferum HOM05D007505 ORTHO05D009476 4.5e-12 75.5 130 40.0
Psat4g060840 Pisum sativum HOM05D007505 ORTHO05D009476 4.5e-12 75.5 124 37.1
TPR.G37551 Trifolium pratense HOM05D007505 ORTHO05D009476 4.5e-12 75.5 130 38.5
TWI23G0126 Tripterygium wilfordii HOM05D007505 ORTHO05D009476 4.5e-12 75.5 145 36.6
CsaV3_1G008840 Cucumis sativus L. HOM05D007505 ORTHO05D009476 5.9e-12 75.1 122 41.0
Gorai.003G115400 Gossypium raimondii HOM05D007505 ORTHO05D009476 5.9e-12 75.1 136 35.3
Thecc.03G026000 Theobroma cacao HOM05D007505 ORTHO05D009476 5.9e-12 75.1 143 35.7
Gohir.D03G109300 Gossypium hirsutum HOM05D007505 ORTHO05D009476 7.7e-12 74.7 136 35.3
TAR371G0969 Trochodendron aralioides HOM05D007505 ORTHO05D009476 7.7e-12 74.7 127 39.4
Haze_07589 Corylus avellana HOM05D007505 ORTHO05D009476 1.0e-11 74.3 123 35.0
Lalb_Chr12g0201901 Lupinus albus HOM05D007505 ORTHO05D009476 1.3e-11 73.9 125 35.2
Cpa.g.sc159.18 Carica papaya HOM05D007505 ORTHO05D009476 1.7e-11 73.6 147 34.7
Eucgr.B00218 Eucalyptus grandis HOM05D007505 ORTHO05D009476 3.8e-11 72.4 127 37.8
arahy.Tifrunner.gnm1.ann1.33YNZL Arachis hypogaea HOM05D007505 ORTHO05D009476 5.0e-11 72.0 126 36.5
Sed0000715 Sechium edule HOM05D007505 ORTHO05D009476 6.5e-11 71.6 142 35.9
Rhsim08G0177900 Rhododendron simsii HOM05D007505 ORTHO05D009476 8.5e-11 71.2 123 33.3
Potri.012G086300 Populus trichocarpa HOM05D007505 ORTHO05D009476 1.5e-10 70.5 127 35.4
Duzib205G0367 Durio zibethinus HOM05D007505 ORTHO05D009476 1.9e-10 70.1 109 41.3
QL10p006874 Quercus lobata HOM05D007505 ORTHO05D009476 2.5e-10 69.7 142 33.1
Actinidia19362 Actinidia chinensis HOM05D007505 ORTHO05D009476 9.4e-10 67.8 144 34.7
Sabra12G0061800 Salix brachista HOM05D007505 ORTHO05D009476 1.2e-09 67.4 88 40.9
CiPaw.11G019500 Carya illinoinensis HOM05D007505 ORTHO05D009476 1.6e-09 67.0 147 36.7
Lj4g0014699 Lotus japonicus HOM05D007505 ORTHO05D009476 2.1e-09 66.6 132 38.6
Nn3g16691 Nelumbo nucifera HOM05D007505 ORTHO05D009476 2.1e-09 66.6 112 37.5
CSS0021026 Camellia sinensis var. sinensis HOM05D007505 ORTHO05D009476 3.6e-09 65.9 115 39.1
Nitab4.5_0000003g0840 Nicotiana tabacum HOM05D007505 ORTHO05D009476 3.6e-09 65.9 124 39.5
Nitab4.5_0008713g0030 Nicotiana tabacum HOM05D007505 ORTHO05D009476 3.6e-09 65.9 124 38.7
Nn4g22591 Nelumbo nucifera HOM05D007505 ORTHO05D009476 6.1e-09 65.1 124 35.5
Sc04g0001500 Simmondsia chinensis HOM05D007505 ORTHO05D009476 1.4e-08 63.9 91 40.7
Lsat_1_v5_gn_1_27760 Lactuca sativa HOM05D007505 ORTHO05D009476 1.8e-08 63.5 127 31.5
Phvul.003G205200 Phaseolus vulgaris HOM05D007505 ORTHO05D009476 3.0e-08 62.8 87 42.5
TAR629G2155 Trochodendron aralioides HOM05D001124 ORTHO05D001004 8.8e-08 61.2 95 38.9
unitig_61.g26472 Utricularia gibba HOM05D007505 ORTHO05D009476 2.0e-07 60.1 125 36.8
ATR0824G199 Amborella trichopoda HOM05D007505 ORTHO05D009476 7.5e-07 58.2 116 32.8
MBI16_g31776_MAGBIO Magnolia biondii HOM05D007505 ORTHO05D009476 7.5e-07 58.2 110 36.4
Dinv20598 Davidia involucrata HOM05D007505 ORTHO05D009476 2.8e-06 56.2 76 40.8
HPP92_004606 Vanilla planifolia HOM05D007505 ORTHO05D009476 2.8e-06 56.2 84 42.9
Rhsim12G0168000 Rhododendron simsii HOM05D007505 ORTHO05D009476 3.7e-06 55.8 87 37.9
Zm00001eb246040 Zea mays HOM05D007505 ORTHO05D009476 3.7e-06 55.8 142 31.0


User provided reference genes

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