Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p54830 Brassica napus HOM05D006578 ORTHO05D008100 1.4e-123 446.4 245 100.0
BraA03t14550Z Brassica rapa HOM05D006578 ORTHO05D008100 3.4e-122 441.8 245 97.6
BcaNung04080 Brassica carinata HOM05D006578 ORTHO05D008100 3.2e-112 408.7 250 84.4
BcaNung01096 Brassica carinata HOM05D006578 ORTHO05D008100 1.3e-105 386.7 242 83.1
BraA01t01458Z Brassica rapa HOM05D006578 ORTHO05D008100 1.7e-105 386.3 240 81.2
C01p19130 Brassica napus HOM05D006578 ORTHO05D008100 1.1e-104 383.6 242 81.0
BolC1t01839H Brassica oleracea HOM05D006578 ORTHO05D008100 1.1e-104 383.6 242 81.0
A01p15200 Brassica napus HOM05D006578 ORTHO05D008100 9.3e-104 380.6 242 83.1
Carub.0007s1722 Capsella rubella HOM05D006578 ORTHO05D008100 2.7e-103 379.0 249 79.5
AT4G23890 Arabidopsis thaliana HOM05D006578 ORTHO05D008100 1.5e-101 373.2 251 78.9
AL7G29450 Arabidopsis lyrata HOM05D006578 ORTHO05D008100 1.3e-100 370.2 251 77.7
CARHR231290 Cardamine hirsuta HOM05D006578 ORTHO05D008100 1.3e-100 370.2 248 75.8
Thhalv10027518m.g Eutrema salsugineum HOM05D006578 ORTHO05D008100 1.4e-99 366.7 250 76.0
Sp7g21850 Schrenkiella parvula HOM05D006578 ORTHO05D008100 2.4e-99 365.9 244 79.9
Aa31LG6G7150 Aethionema arabicum HOM05D006578 ORTHO05D008100 1.2e-90 337.0 251 70.1
THA.LOC104815081 Tarenaya hassleriana HOM05D006578 ORTHO05D008100 4.6e-87 325.1 256 68.4
BcaC09g50934 Brassica carinata HOM05D006578 ORTHO05D008100 3.7e-84 315.5 196 81.1
Cpa.g.sc79.32 Carica papaya HOM05D006578 ORTHO05D008100 5.5e-72 275.0 239 59.4
Thecc.03G298500 Theobroma cacao HOM05D006578 ORTHO05D008100 1.2e-71 273.9 239 58.6
COL.COLO4_10707 Corchorus olitorius HOM05D006578 ORTHO05D008100 1.0e-70 270.8 239 60.7
Ah.07g197460 Amaranthus hybridus HOM05D006578 ORTHO05D008100 2.3e-70 269.6 250 54.8
TWI60G1670 Tripterygium wilfordii HOM05D006578 ORTHO05D008100 6.7e-70 268.1 241 59.3
Duzib068G0825 Durio zibethinus HOM05D006578 ORTHO05D008100 2.6e-69 266.2 239 56.9
Ciclev10024562m.g Citrus clementina HOM05D006578 ORTHO05D008100 1.1e-67 260.8 239 58.2
Lj3g0025915 Lotus japonicus HOM05D006578 ORTHO05D008100 1.8e-67 260.0 222 59.5
Gohir.A05G346600 Gossypium hirsutum HOM05D006578 ORTHO05D008100 2.4e-67 259.6 242 59.5
EL10Ac5g12919 Beta vulgaris HOM05D006578 ORTHO05D008100 3.1e-67 259.2 248 54.0
Cfa012002 Carpinus fangiana HOM05D006578 ORTHO05D008100 7.0e-67 258.1 244 59.0
Atru.chr9.1977 Acer truncatum HOM05D006578 ORTHO05D008100 9.1e-67 257.7 243 54.3
Atru.chr9.1992 Acer truncatum HOM05D006578 ORTHO05D008100 9.1e-67 257.7 243 54.3
CiPaw.11G120900 Carya illinoinensis HOM05D006578 ORTHO05D008100 9.1e-67 257.7 239 56.1
Sabra01G0067600 Salix brachista HOM05D006578 ORTHO05D008100 1.6e-66 256.9 242 55.8
Medtr8g032260 Medicago truncatula HOM05D006578 ORTHO05D008100 3.5e-66 255.8 230 58.7
Prupe.5G120500 Prunus persica HOM05D006578 ORTHO05D008100 4.5e-66 255.4 244 54.1
FAN18G3822 Fragaria x ananassa HOM05D006578 ORTHO05D008100 5.9e-66 255.0 242 52.9
FAN13G1942 Fragaria x ananassa HOM05D006578 ORTHO05D008100 1.7e-65 253.4 242 56.2
Ca_18845_v3 Cicer arietinum L. HOM05D006578 ORTHO05D008100 5.0e-65 251.9 238 56.3
FvH4_5g04650 Fragaria vesca HOM05D006578 ORTHO05D008100 5.0e-65 251.9 242 52.5
FAN18G0518 Fragaria x ananassa HOM05D006578 ORTHO05D008100 6.5e-65 251.5 242 52.5
FAN04G1820 Fragaria x ananassa HOM05D006578 ORTHO05D008100 1.1e-64 250.8 242 55.8
Manes.02G009600 Manihot esculenta HOM05D006578 ORTHO05D008100 1.9e-64 250.0 236 55.5
Potri.001G091300 Populus trichocarpa HOM05D006578 ORTHO05D008100 1.9e-64 250.0 230 55.7
Potri.003G140400 Populus trichocarpa HOM05D006578 ORTHO05D008100 1.9e-64 250.0 234 54.7
AUR62010844 Chenopodium quinoa HOM05D006578 ORTHO05D008100 3.2e-64 249.2 248 52.4
FAN08G0426 Fragaria x ananassa HOM05D006578 ORTHO05D008100 3.2e-64 249.2 242 55.4
TAR633G0540 Trochodendron aralioides HOM05D006578 ORTHO05D008100 3.2e-64 249.2 233 53.2
PGR042G0620 Punica granatum HOM05D006578 ORTHO05D008100 4.2e-64 248.8 235 58.3
CsaV3_4G006610 Cucumis sativus L. HOM05D006578 ORTHO05D008100 1.2e-63 247.3 239 55.6
ClCG07G011600 Citrullus lanatus HOM05D006578 ORTHO05D008100 2.1e-63 246.5 234 57.7
MELO3C016296.2 Cucumis melo HOM05D006578 ORTHO05D008100 2.7e-63 246.1 238 54.6
Glyma.07G075100 Glycine max HOM05D006578 ORTHO05D008100 3.6e-63 245.7 228 56.6
Nitab4.5_0001210g0110 Nicotiana tabacum HOM05D006578 ORTHO05D008100 6.1e-63 245.0 237 60.8
BcaNung04242 Brassica carinata HOM05D006578 ORTHO05D008100 8.0e-63 244.6 166 80.7
C07p53190 Brassica napus HOM05D006578 ORTHO05D008100 8.0e-63 244.6 166 80.7
BolC7t45814H Brassica oleracea HOM05D006578 ORTHO05D008100 8.0e-63 244.6 166 80.7
Solyc08g082400.1 Solanum lycopersicum HOM05D006578 ORTHO05D008100 1.0e-62 244.2 238 60.9
CSS0036002 Camellia sinensis var. sinensis HOM05D006578 ORTHO05D008100 1.8e-62 243.4 245 58.0
Lsat_1_v5_gn_3_10861 Lactuca sativa HOM05D006578 ORTHO05D008100 2.3e-62 243.0 241 63.5
Oeu009960.1 Olea europaea HOM05D006578 ORTHO05D008100 3.0e-62 242.7 231 52.4
Sopen08g030660 Solanum pennellii HOM05D006578 ORTHO05D008100 3.0e-62 242.7 237 57.8
PGSC0003DMG400044958 Solanum tuberosum HOM05D006578 ORTHO05D008100 3.0e-62 242.7 235 60.9
Phvul.010G094000 Phaseolus vulgaris HOM05D006578 ORTHO05D008100 8.8e-62 241.1 229 55.0
QL02p030348 Quercus lobata HOM05D006578 ORTHO05D008100 1.2e-61 240.7 183 65.6
MSTRG.11922 Avicennia marina HOM05D006578 ORTHO05D008100 2.0e-61 240.0 224 55.4
HanXRQChr17g0534801 Helianthus annuus HOM05D006578 ORTHO05D008100 2.0e-61 240.0 238 65.1
Dinv37530 Davidia involucrata HOM05D006578 ORTHO05D008100 7.5e-61 238.0 228 54.8
Lalb_Chr04g0256691 Lupinus albus HOM05D006578 ORTHO05D008100 7.5e-61 238.0 227 62.1
Hma1.2p1_0359F.1_g135230 Hydrangea macrophylla HOM05D006578 ORTHO05D008100 9.8e-61 237.7 239 51.5
Sed0010985 Sechium edule HOM05D006578 ORTHO05D008100 2.2e-60 236.5 232 53.0
Haze_09067 Corylus avellana HOM05D006578 ORTHO05D008100 3.7e-60 235.7 186 61.8
CAN.G1804.8 Capsicum annuum HOM05D006578 ORTHO05D008100 8.3e-60 234.6 243 58.0
Nitab4.5_0006775g0020 Nicotiana tabacum HOM05D006578 ORTHO05D008100 8.3e-60 234.6 226 61.1
VMungo0331G0206 Vigna mungo HOM05D005332 ORTHO05D006861 1.8e-59 233.4 227 54.2
Cc08_g16100 Coffea canephora HOM05D006578 ORTHO05D008100 2.4e-59 233.0 237 51.9
ATR0796G340 Amborella trichopoda HOM05D006578 ORTHO05D008100 4.1e-59 232.3 239 51.0
Migut.A00640 Erythranthe guttata HOM05D006578 ORTHO05D008100 1.2e-58 230.7 241 54.8
Actinidia27316 Actinidia chinensis HOM05D006578 ORTHO05D008100 2.7e-58 229.6 179 64.2
Peaxi162Scf00074g00082 Petunia axillaris HOM05D006578 ORTHO05D008100 2.7e-58 229.6 227 55.1
Gorai.012G073800 Gossypium raimondii HOM05D006578 ORTHO05D008100 4.5e-58 228.8 243 53.9
PSO761G0627 Papaver somniferum HOM05D006578 ORTHO05D008100 7.7e-58 228.0 263 54.0
Gohir.D04G065600 Gossypium hirsutum HOM05D006578 ORTHO05D008100 1.0e-57 227.6 243 53.9
unitig_32.g10973 Utricularia gibba HOM05D006578 ORTHO05D008100 1.0e-57 227.6 209 55.0
PSO210G4984 Papaver somniferum HOM05D006578 ORTHO05D008100 1.3e-57 227.3 262 55.0
ECA246G0449 Erigeron canadensis HOM05D001832 ORTHO05D001861 9.5e-56 221.1 226 59.7
DCAR_029888 Daucus carota HOM05D006578 ORTHO05D008100 6.1e-55 218.4 218 52.3
Aqoxy2G01516 Aquilegia oxysepala HOM05D006578 ORTHO05D008100 3.0e-54 216.1 233 60.1
AUR62019843 Chenopodium quinoa HOM05D006578 ORTHO05D008100 5.7e-53 211.8 248 50.0
SEGI_09764 Sequoiadendron giganteum HOM05D006578 ORTHO05D008100 6.3e-52 208.4 202 52.0
SEGI_13573 Sequoiadendron giganteum HOM05D006578 ORTHO05D008100 1.1e-51 207.6 235 48.5
Lj2P167T19 Lonicera japonica HOM05D006578 ORTHO05D008100 1.8e-51 206.8 185 59.5
Os07g0196200 Oryza sativa ssp. japonica HOM05D006578 ORTHO05D008100 3.5e-50 202.6 212 55.7
FAN13G3291 Fragaria x ananassa HOM05D006578 ORTHO05D008100 1.3e-49 200.7 177 61.0
Psat4g152960 Pisum sativum HOM05D006578 ORTHO05D008100 2.9e-49 199.5 224 50.0
Hma1.2p1_0359F.1_g135240 Hydrangea macrophylla HOM05D006578 ORTHO05D008100 3.8e-49 199.1 134 70.9
Zm00001eb224490 Zea mays HOM05D006578 ORTHO05D008100 5.6e-48 195.3 208 49.5
Sabra03G0101400 Salix brachista HOM05D006578 ORTHO05D008100 2.1e-47 193.4 234 45.7
GSVIVG01019536001 Vitis vinifera HOM05D006578 ORTHO05D008100 1.1e-40 171.0 236 44.1
Pp3c11_19730 Physcomitrium patens HOM05D006578 ORTHO05D008100 2.3e-38 163.3 189 42.3
Mapoly0067s0043 Marchantia polymorpha HOM05D006578 ORTHO05D008100 3.1e-38 162.9 197 43.1
CBR_g28643 Chara braunii HOM05D006578 ORTHO05D008100 4.4e-37 159.1 185 45.4
AagrBONN_evm.TU.Sc2ySwM_117.36 Anthoceros agrestis HOM05D006578 ORTHO05D008100 7.0e-35 151.8 187 43.9
SMO146G0113 Selaginella moellendorffii HOM05D006578 ORTHO05D008100 2.5e-32 143.3 202 40.6
SalBow1G4365 Salvia bowleyana HOM05D006578 ORTHO05D008100 2.5e-24 116.7 205 44.4
SalBow1G5827 Salvia bowleyana HOM05D006578 ORTHO05D008100 2.5e-24 116.7 205 44.4
VMungo1383G2377 Vigna mungo HOM05D006578 ORTHO05D008100 2.1e-23 113.6 122 59.0
Glyma.09G263100 Glycine max HOM05D006578 ORTHO05D008100 3.6e-23 112.8 143 53.1
CiPaw.12G082500 Carya illinoinensis HOM05D006578 ORTHO05D008100 4.7e-23 112.5 238 32.8
TWI81G0713 Tripterygium wilfordii HOM05D006578 ORTHO05D008100 5.2e-22 109.0 134 47.0
Phvul.008G068900 Phaseolus vulgaris HOM05D006578 ORTHO05D008100 1.5e-21 107.5 128 60.9
arahy.Tifrunner.gnm1.ann1.6WXN94 Arachis hypogaea HOM05D006578 ORTHO05D008100 1.7e-20 104.0 126 48.4
Medtr7g076620 Medicago truncatula HOM05D006578 ORTHO05D008100 2.2e-20 103.6 122 45.9
Ca_07882_v3 Cicer arietinum L. HOM05D006578 ORTHO05D008100 3.8e-20 102.8 120 47.5
TPR.G17579 Trifolium pratense HOM05D006578 ORTHO05D008100 3.8e-20 102.8 121 47.1
arahy.Tifrunner.gnm1.ann1.UYM9MT Arachis hypogaea HOM05D006578 ORTHO05D008100 6.4e-20 102.1 127 54.3
Glyma.18G229100 Glycine max HOM05D006578 ORTHO05D008100 8.4e-20 101.7 148 48.6
Lj1g0003243 Lotus japonicus HOM05D006578 ORTHO05D008100 1.1e-19 101.3 108 59.3
Psat3g111760 Pisum sativum HOM05D006578 ORTHO05D008100 1.4e-19 100.9 111 55.9
Sc07g0010050 Simmondsia chinensis HOM05D006578 ORTHO05D008100 8.7e-17 91.7 156 44.2
SGA_v2.0_scaffold96G29015 Striga asiatica HOM05D003962 ORTHO05D004714 8.1e-15 85.1 129 39.5
Sabra15G0075700 Salix brachista HOM05D000345 ORTHO05D000215 1.4e-14 84.3 101 48.5
Nn4g25270 Nelumbo nucifera HOM05D006578 ORTHO05D008100 1.2e-13 81.3 118 39.8
HPP92_001215 Vanilla planifolia HOM05D006578 ORTHO05D008100 3.4e-13 79.7 87 49.4
Glyma.03G015000 Glycine max HOM05D006578 ORTHO05D008100 4.9e-12 75.9 110 39.1
Oeu054024.1 Olea europaea HOM05D006578 ORTHO05D008100 1.3e-09 67.8 64 51.6
Sabra10G0172600 Salix brachista HOM05D006578 ORTHO05D008100 4.0e-06 56.2 30 83.3


User provided reference genes

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