Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p53680 Brassica napus HOM05D000060 ORTHO05D010807 1.0e-72 276.6 135 100.0
BraA03t14431Z Brassica rapa HOM05D000060 ORTHO05D010807 1.8e-56 222.6 143 79.7
BolC7t45700H Brassica oleracea HOM05D000060 ORTHO05D010807 2.2e-54 215.7 201 61.7
C07p52070 Brassica napus HOM05D000060 ORTHO05D010807 4.0e-48 194.9 147 70.7
C07p52090 Brassica napus HOM05D000060 ORTHO05D010807 2.9e-46 188.7 148 66.9
BcaNung02483 Brassica carinata HOM05D000060 ORTHO05D010807 1.4e-45 186.4 148 66.2
BolC7t45699H Brassica oleracea HOM05D000060 ORTHO05D010807 3.2e-45 185.3 197 56.3
C07p52060 Brassica napus HOM05D000060 ORTHO05D010807 7.1e-45 184.1 197 56.3
C07p52040 Brassica napus HOM05D000060 ORTHO05D010807 7.8e-44 180.6 197 55.3
BraA03t14432Z Brassica rapa HOM05D000060 ORTHO05D010807 5.2e-40 167.9 203 51.2
BcaNung01678 Brassica carinata HOM05D000060 ORTHO05D010807 2.9e-38 162.2 202 51.0
BcaC01g01762 Brassica carinata HOM05D000060 ORTHO05D010807 5.1e-35 151.4 136 61.0
BcaNung01680 Brassica carinata HOM05D000060 ORTHO05D010807 2.8e-33 145.6 202 49.5
A03p53660 Brassica napus HOM05D000060 ORTHO05D010807 7.3e-26 120.9 69 91.3
A03p53670 Brassica napus HOM05D000060 ORTHO05D010807 4.0e-24 115.2 103 58.3
BcaNung02484 Brassica carinata HOM05D000060 ORTHO05D027336 3.4e-23 112.1 87 64.4
C07p52050 Brassica napus HOM05D000060 ORTHO05D027336 3.4e-23 112.1 87 64.4
Sp7g20710 Schrenkiella parvula HOM05D000060 ORTHO05D010807 1.9e-13 79.7 216 33.3
Thhalv10027063m.g Eutrema salsugineum HOM05D000060 ORTHO05D010807 1.3e-09 67.0 160 31.2
Thhalv10000718m.g Eutrema salsugineum HOM05D000060 ORTHO05D010807 1.6e-09 66.6 160 30.6
Thhalv10000522m.g Eutrema salsugineum HOM05D000060 ORTHO05D010807 4.8e-09 65.1 160 32.5
Thhalv10000593m.g Eutrema salsugineum HOM05D000060 ORTHO05D010807 1.4e-08 63.5 160 32.5
Thhalv10000561m.g Eutrema salsugineum HOM05D000060 ORTHO05D010807 2.4e-08 62.8 160 30.0
BraA03t14433Z Brassica rapa HOM05D000060 ORTHO05D010807 4.0e-08 62.0 40 67.5
Thhalv10000641m.g Eutrema salsugineum HOM05D000060 ORTHO05D010807 6.9e-08 61.2 160 31.9
Thhalv10027114m.g Eutrema salsugineum HOM05D000060 ORTHO05D010807 1.5e-07 60.1 108 35.2
Thhalv10000672m.g Eutrema salsugineum HOM05D000060 ORTHO05D010807 2.0e-07 59.7 113 33.6
Thhalv10000419m.g Eutrema salsugineum HOM05D000060 ORTHO05D010807 4.5e-07 58.5 108 33.3
HPP92_018720 Vanilla planifolia HOM05D000060 ORTHO05D000082 7.6e-07 57.8 101 32.7
Thhalv10000430m.g Eutrema salsugineum HOM05D000060 ORTHO05D010807 1.0e-06 57.4 123 30.9
Sed0008990 Sechium edule HOM05D000060 ORTHO05D000082 1.0e-06 57.4 60 48.3
BcaC05g24707 Brassica carinata HOM05D000060 ORTHO05D000082 1.7e-06 56.6 91 36.3
A06p05010 Brassica napus HOM05D000060 ORTHO05D000082 1.7e-06 56.6 91 36.3
C05p05950 Brassica napus HOM05D000060 ORTHO05D000082 1.7e-06 56.6 91 36.3
BolC5t29357H Brassica oleracea HOM05D000060 ORTHO05D000082 1.7e-06 56.6 91 36.3
BraA06t23707Z Brassica rapa HOM05D000060 ORTHO05D000082 1.7e-06 56.6 91 36.3
BcaC07g41969 Brassica carinata HOM05D000060 ORTHO05D000082 2.9e-06 55.8 91 35.2
BcaC07g42503 Brassica carinata HOM05D000060 ORTHO05D000082 2.9e-06 55.8 91 35.2
A09p66120 Brassica napus HOM05D000060 ORTHO05D000082 2.9e-06 55.8 91 35.2
C08p50270 Brassica napus HOM05D000060 ORTHO05D000082 2.9e-06 55.8 91 35.2
BolC8t52556H Brassica oleracea HOM05D000060 ORTHO05D000082 2.9e-06 55.8 91 35.2
BraA09t41950Z Brassica rapa HOM05D000060 ORTHO05D000082 2.9e-06 55.8 91 35.2
Ca_01437_v3 Cicer arietinum L. HOM05D000060 ORTHO05D000082 2.9e-06 55.8 86 36.0
Manes.12G093700 Manihot esculenta HOM05D000060 ORTHO05D000082 2.9e-06 55.8 109 32.1
Sp1g06580 Schrenkiella parvula HOM05D000060 ORTHO05D000082 3.8e-06 55.5 91 35.2
Thhalv10000694m.g Eutrema salsugineum HOM05D000060 ORTHO05D010807 4.9e-06 55.1 44 52.3
Lj4P139T60 Lonicera japonica HOM05D000060 ORTHO05D000082 4.9e-06 55.1 104 32.7
Thhalv10026904m.g Eutrema salsugineum HOM05D000060 ORTHO05D010807 6.5e-06 54.7 108 31.5
Atru.chr12.87 Acer truncatum HOM05D000060 ORTHO05D000082 8.4e-06 54.3 101 35.6
Ah.01g014910 Amaranthus hybridus HOM05D000060 ORTHO05D000082 8.4e-06 54.3 70 37.1
Dinv21755 Davidia involucrata HOM05D000060 ORTHO05D000082 8.4e-06 54.3 101 34.7
Lalb_Chr24g0394451 Lupinus albus HOM05D000060 ORTHO05D000082 8.4e-06 54.3 91 36.3
Psat5g277280 Pisum sativum HOM05D000060 ORTHO05D000082 8.4e-06 54.3 115 32.2
TAR636G0921 Trochodendron aralioides HOM05D000060 ORTHO05D000082 8.4e-06 54.3 100 34.0


User provided reference genes

Program Settings