Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p52720 Brassica napus HOM05D006759 ORTHO05D008633 7.0e-167 590.5 289 100.0
BolC7t45615H Brassica oleracea HOM05D006759 ORTHO05D008633 8.6e-165 583.6 289 97.9
BcaC06g30660 Brassica carinata HOM05D006759 ORTHO05D008633 1.5e-161 572.8 289 97.6
BraA03t14346Z Brassica rapa HOM05D006759 ORTHO05D008633 2.3e-157 558.9 273 99.6
Sp7g19390 Schrenkiella parvula HOM05D006759 ORTHO05D008633 2.3e-157 558.9 289 93.1
Thhalv10025914m.g Eutrema salsugineum HOM05D006759 ORTHO05D008633 1.9e-156 555.8 289 94.5
BcaNung00862 Brassica carinata HOM05D006759 ORTHO05D008633 7.3e-156 553.9 273 98.2
C07p51160 Brassica napus HOM05D006759 ORTHO05D008633 7.3e-156 553.9 273 98.2
Carub.0007s2012 Capsella rubella HOM05D006759 ORTHO05D008633 1.2e-155 553.1 289 94.1
AL7G32800 Arabidopsis lyrata HOM05D006759 ORTHO05D008633 2.1e-155 552.4 289 93.8
AT4G21320 Arabidopsis thaliana HOM05D006759 ORTHO05D008633 2.8e-155 552.0 289 93.8
CARHR227890 Cardamine hirsuta HOM05D006759 ORTHO05D008633 9.8e-153 543.5 289 91.7
Aa31LG6G3340 Aethionema arabicum HOM05D006759 ORTHO05D008633 3.9e-149 531.6 289 89.3
THA.LOC104812582 Tarenaya hassleriana HOM05D006759 ORTHO05D008633 2.5e-148 528.9 285 90.9
Duzib160G0398 Durio zibethinus HOM05D006759 ORTHO05D008633 9.2e-135 483.8 289 79.2
QL05p077196 Quercus lobata HOM05D006759 ORTHO05D008633 4.6e-134 481.5 283 80.2
MD10G1311200 Malus domestica HOM05D006759 ORTHO05D008633 1.0e-133 480.3 285 81.8
QL93p0073_1304 Quercus lobata HOM05D006759 ORTHO05D008633 1.7e-133 479.6 283 79.9
Thecc.06G208000 Theobroma cacao HOM05D006759 ORTHO05D008633 3.9e-133 478.4 289 78.2
Cfa016405 Carpinus fangiana HOM05D006759 ORTHO05D008633 8.6e-133 477.2 283 79.2
CSS0000245 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 1.1e-132 476.9 285 78.9
Gorai.011G019000 Gossypium raimondii HOM05D006759 ORTHO05D008633 1.1e-132 476.9 289 77.2
COL.COLO4_31683 Corchorus olitorius HOM05D006759 ORTHO05D008633 1.9e-132 476.1 289 76.5
Haze_06682 Corylus avellana HOM05D006759 ORTHO05D008633 2.5e-132 475.7 285 78.9
Gohir.A10G017000 Gossypium hirsutum HOM05D006759 ORTHO05D008633 3.3e-132 475.3 289 77.2
CSS0002106 Camellia sinensis var. sinensis HOM05D006759 ORTHO05D008633 4.3e-132 474.9 285 78.6
Gohir.D10G017100 Gossypium hirsutum HOM05D006759 ORTHO05D008633 4.3e-132 474.9 289 77.2
vmacro15843 Vaccinium macrocarpon HOM05D006759 ORTHO05D008633 5.6e-132 474.6 285 77.9
Rhsim02G0115500 Rhododendron simsii HOM05D006759 ORTHO05D008633 9.5e-132 473.8 283 78.8
PGR004G2806 Punica granatum HOM05D006759 ORTHO05D008633 2.1e-131 472.6 283 79.5
Eucgr.D00856 Eucalyptus grandis HOM05D006759 ORTHO05D008633 8.1e-131 470.7 285 77.5
Migut.M01261 Erythranthe guttata HOM05D006759 ORTHO05D008633 1.4e-130 469.9 287 77.4
MSTRG.15955 Avicennia marina HOM05D006759 ORTHO05D008633 1.8e-130 469.5 289 76.5
CANSAT56G4156 Cannabis sativa HOM05D006759 ORTHO05D008633 3.1e-130 468.8 285 74.7
Cpa.g.sc81.5 Carica papaya HOM05D006759 ORTHO05D008633 3.1e-130 468.8 287 77.4
TWI38G2336 Tripterygium wilfordii HOM05D006759 ORTHO05D008633 3.1e-130 468.8 286 76.6
MELO3C002513.2 Cucumis melo HOM05D006759 ORTHO05D008633 5.2e-130 468.0 282 78.0
SGA_v2.0_scaffold7G03895 Striga asiatica HOM05D006759 ORTHO05D008633 5.2e-130 468.0 285 76.5
CiPaw.09G080000 Carya illinoinensis HOM05D006759 ORTHO05D008633 1.2e-129 466.8 285 76.8
Atru.chr10.2043 Acer truncatum HOM05D006759 ORTHO05D008633 7.6e-129 464.2 286 75.5
CsaV3_1G011360 Cucumis sativus L. HOM05D006759 ORTHO05D008633 1.7e-128 463.0 282 77.3
ClCG03G005150 Citrullus lanatus HOM05D006759 ORTHO05D008633 1.1e-127 460.3 296 74.7
Ciclev10016144m.g Citrus clementina HOM05D006759 ORTHO05D008633 1.4e-127 459.9 285 75.4
FAN21G1217 Fragaria x ananassa HOM05D006759 ORTHO05D008633 7.1e-127 457.6 283 77.7
FAN21G3610 Fragaria x ananassa HOM05D006759 ORTHO05D008633 7.1e-127 457.6 283 77.7
FAN25G0528 Fragaria x ananassa HOM05D006759 ORTHO05D008633 9.2e-127 457.2 283 77.7
FvH4_3g02960 Fragaria vesca HOM05D006759 ORTHO05D008633 1.6e-126 456.4 283 77.7
RcHm_v2.0_Chr5g0004601 Rosa chinensis HOM05D006759 ORTHO05D008633 1.6e-126 456.4 283 76.7
Sc05g0008410 Simmondsia chinensis HOM05D006759 ORTHO05D008633 2.1e-126 456.1 281 75.1
Dinv17853 Davidia involucrata HOM05D006759 ORTHO05D008633 6.0e-126 454.5 270 79.6
Potri.011G031600 Populus trichocarpa HOM05D006759 ORTHO05D008633 6.0e-126 454.5 287 74.9
Medtr4g092110 Medicago truncatula HOM05D006759 ORTHO05D008633 1.3e-125 453.4 285 73.0
Sabra11G0019100 Salix brachista HOM05D006759 ORTHO05D008633 1.7e-125 453.0 287 76.0
SalBow8G2756 Salvia bowleyana HOM05D006759 ORTHO05D008633 3.9e-125 451.8 285 74.0
HanXRQChr05g0130811 Helianthus annuus HOM05D006759 ORTHO05D008633 5.1e-125 451.4 280 75.7
Cc02_g11810 Coffea canephora HOM05D006759 ORTHO05D008633 1.9e-124 449.5 292 73.6
Sabra11G0024900 Salix brachista HOM05D006759 ORTHO05D008633 2.5e-124 449.1 287 75.6
Lsat_1_v5_gn_7_18360 Lactuca sativa HOM05D006759 ORTHO05D008633 5.6e-124 448.0 284 73.2
Prupe.4G029700 Prunus persica HOM05D006759 ORTHO05D008633 5.6e-124 448.0 274 77.7
Lalb_Chr05g0218011 Lupinus albus HOM05D006759 ORTHO05D008633 9.6e-124 447.2 285 70.2
Lj4g0006967 Lotus japonicus HOM05D006759 ORTHO05D008633 1.2e-123 446.8 283 72.4
arahy.Tifrunner.gnm1.ann1.13LU1X Arachis hypogaea HOM05D006759 ORTHO05D008633 2.1e-123 446.0 286 72.4
arahy.Tifrunner.gnm1.ann1.6345FV Arachis hypogaea HOM05D006759 ORTHO05D008633 6.2e-123 444.5 284 72.5
Manes.16G016600 Manihot esculenta HOM05D006759 ORTHO05D008633 1.8e-122 443.0 286 73.8
Oeu058167.4 Olea europaea HOM05D006759 ORTHO05D008633 1.8e-122 443.0 307 69.7
ECA236G1815 Erigeron canadensis HOM05D006759 ORTHO05D008633 3.1e-122 442.2 283 73.1
Ca_18449_v3 Cicer arietinum L. HOM05D006759 ORTHO05D008633 1.2e-121 440.3 285 70.5
Psat7g105480 Pisum sativum HOM05D006759 ORTHO05D008633 1.2e-121 440.3 285 70.5
TAR626G1069 Trochodendron aralioides HOM05D006759 ORTHO05D008633 1.5e-121 439.9 283 74.9
AUR62014623 Chenopodium quinoa HOM05D006759 ORTHO05D008633 2.6e-121 439.1 287 71.1
Nitab4.5_0006475g0040 Nicotiana tabacum HOM05D006759 ORTHO05D008633 9.9e-121 437.2 284 70.4
MBI02_g02472_MAGBIO Magnolia biondii HOM05D006759 ORTHO05D008633 2.2e-120 436.0 330 64.2
AUR62012578 Chenopodium quinoa HOM05D006759 ORTHO05D008633 2.9e-120 435.6 287 70.7
Nitab4.5_0002345g0080 Nicotiana tabacum HOM05D006759 ORTHO05D008633 3.8e-120 435.3 284 70.4
TPR.G13912 Trifolium pratense HOM05D006759 ORTHO05D008633 3.8e-120 435.3 285 69.8
Nn1g03732 Nelumbo nucifera HOM05D006759 ORTHO05D008633 1.4e-119 433.3 283 72.4
CAN.G424.100 Capsicum annuum HOM05D006759 ORTHO05D008633 6.0e-118 427.9 283 67.8
PSO170G0831 Papaver somniferum HOM05D006759 ORTHO05D008633 7.8e-118 427.6 286 71.0
Glyma.08G062300 Glycine max HOM05D006759 ORTHO05D008633 1.3e-117 426.8 285 69.1
Peaxi162Scf00082g01114 Petunia axillaris HOM05D006759 ORTHO05D008633 3.9e-117 425.2 281 69.8
PGSC0003DMG400021726 Solanum tuberosum HOM05D006759 ORTHO05D008633 2.5e-116 422.5 283 67.5
EL10As6g23697 Beta vulgaris HOM05D006759 ORTHO05D008633 7.3e-116 421.0 287 70.0
Ah.14g088500 Amaranthus hybridus HOM05D006759 ORTHO05D008633 6.2e-115 417.9 277 70.8
Sopen02g024680 Solanum pennellii HOM05D006759 ORTHO05D008633 1.8e-114 416.4 283 67.1
Solyc02g079930.3 Solanum lycopersicum HOM05D006759 ORTHO05D008633 7.6e-113 411.0 283 66.4
CDE05G1382 Ceratophyllum demersum HOM05D006759 ORTHO05D008633 1.3e-112 410.2 282 67.0
DCAR_028150 Daucus carota HOM05D006759 ORTHO05D008633 1.7e-112 409.8 270 70.0
unitig_37.g12139 Utricularia gibba HOM05D006759 ORTHO05D008633 1.4e-111 406.8 281 65.8
Sed0013464 Sechium edule HOM05D006759 ORTHO05D008633 1.0e-109 400.6 252 75.4
ATR0073G021 Amborella trichopoda HOM05D006759 ORTHO05D008633 2.5e-108 396.0 266 69.2
Hund21315 Selenicereus undatus HOM05D006759 ORTHO05D008633 7.4e-108 394.4 260 70.4
Phvul.002G218300 Phaseolus vulgaris HOM05D006759 ORTHO05D008633 1.6e-102 376.7 279 62.7
HPP92_027153 Vanilla planifolia HOM05D006759 ORTHO05D008633 1.6e-102 376.7 247 70.4
Os06g0682900 Oryza sativa ssp. japonica HOM05D006759 ORTHO05D008633 5.1e-101 371.7 259 66.8
Zm00001eb225360 Zea mays HOM05D006759 ORTHO05D008633 3.3e-100 369.0 279 63.4
VMungo0251G0437 Vigna mungo HOM05D006759 ORTHO05D008633 4.3e-100 368.6 279 62.0
Lj1C1222T1 Lonicera japonica HOM05D006759 ORTHO05D008633 9.3e-95 350.9 240 69.6
GSVIVG01004352001 Vitis vinifera HOM05D006759 ORTHO05D008633 7.9e-94 347.8 214 76.2
SEGI_30514 Sequoiadendron giganteum HOM05D006759 ORTHO05D008633 7.4e-84 314.7 273 55.3
Actinidia36908 Actinidia chinensis HOM05D006759 ORTHO05D008633 1.7e-72 276.9 177 74.6
AagrBONN_evm.TU.Sc2ySwM_117.529 Anthoceros agrestis HOM05D006759 ORTHO05D008633 4.7e-70 268.9 261 48.3
Pp3c22_820 Physcomitrium patens HOM05D006759 ORTHO05D008633 1.1e-68 264.2 254 50.8
Pp3c18_19780 Physcomitrium patens HOM05D006759 ORTHO05D008633 5.7e-68 261.9 261 50.2
Mapoly0122s0010 Marchantia polymorpha HOM05D006759 ORTHO05D008633 2.8e-67 259.6 257 49.8
Nn2g12529 Nelumbo nucifera HOM05D006759 ORTHO05D008633 1.4e-50 204.1 153 65.4
GSVIVG01002901001 Vitis vinifera HOM05D006759 ORTHO05D008633 2.5e-47 193.4 110 82.7
SMO327G0040 Selaginella moellendorffii HOM05D006759 ORTHO05D008633 2.1e-46 190.3 255 40.8
Hund21313 Selenicereus undatus HOM05D006759 ORTHO05D008633 1.7e-43 180.6 301 39.5
Potri.004G031100 Populus trichocarpa HOM05D006759 ORTHO05D008633 2.7e-41 173.3 196 49.0
CANSAT21G1109 Cannabis sativa HOM05D006759 ORTHO05D008633 1.1e-39 167.9 103 74.8
RcHm_v2.0_Chr5g0004571 Rosa chinensis HOM05D006759 ORTHO05D008633 8.9e-37 158.3 145 58.6
Glyma.07G186901 Glycine max HOM05D006759 ORTHO05D008633 6.4e-35 152.1 101 71.3
Aqoxy1G03825 Aquilegia oxysepala HOM05D006759 ORTHO05D008633 5.6e-31 139.0 87 72.4
Nn7g36203 Nelumbo nucifera HOM05D006759 ORTHO05D008633 2.1e-30 137.1 96 65.6
GSVIVG01004471001 Vitis vinifera HOM05D006759 ORTHO05D008633 5.2e-29 132.5 77 79.2
COL.COLO4_37489 Corchorus olitorius HOM05D006759 ORTHO05D161314 3.6e-22 109.8 73 74.0
COL.COLO4_11824 Corchorus olitorius HOM05D000068 ORTHO05D000084 1.4e-21 107.8 68 76.5
Hund21314 Selenicereus undatus HOM05D006759 ORTHO05D381616 2.7e-09 67.0 38 76.3
Nn1g06940 Nelumbo nucifera HOM05D006759 ORTHO05D008633 6.2e-06 55.8 48 60.4


User provided reference genes

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