Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p51230 Brassica napus HOM05D007268 ORTHO05D009152 3.1e-57 224.9 115 100.0
BraA03t14206Z Brassica rapa HOM05D007268 ORTHO05D009152 8.9e-57 223.4 115 99.1
BcaNung02699 Brassica carinata HOM05D007268 ORTHO05D009152 1.1e-51 206.5 115 93.0
C07p49660 Brassica napus HOM05D007268 ORTHO05D009152 1.1e-51 206.5 115 93.0
BolC7t45467H Brassica oleracea HOM05D007268 ORTHO05D009152 1.1e-51 206.5 115 93.0
BcaC06g30591 Brassica carinata HOM05D007268 ORTHO05D009152 5.6e-51 204.1 115 91.3
CARHR225150 Cardamine hirsuta HOM05D007268 ORTHO05D009152 2.4e-49 198.7 112 89.3
A01p10290 Brassica napus HOM05D007268 ORTHO05D009152 3.1e-49 198.4 115 88.7
BraA01t00976Z Brassica rapa HOM05D007268 ORTHO05D009152 3.1e-49 198.4 115 88.7
BcaC09g51527 Brassica carinata HOM05D007268 ORTHO05D009152 6.9e-49 197.2 115 86.1
BcaC06g30594 Brassica carinata HOM05D007268 ORTHO05D009152 1.2e-48 196.4 112 88.4
BcaNung00009 Brassica carinata HOM05D007268 ORTHO05D009152 1.2e-48 196.4 112 88.4
Thhalv10026609m.g Eutrema salsugineum HOM05D007268 ORTHO05D009152 3.4e-48 194.9 112 87.5
C01p12240 Brassica napus HOM05D007268 ORTHO05D009152 7.6e-48 193.7 115 85.2
BolC1t01200H Brassica oleracea HOM05D007268 ORTHO05D009152 7.6e-48 193.7 115 85.2
Sp7g15690 Schrenkiella parvula HOM05D007268 ORTHO05D009152 9.9e-48 193.4 112 86.6
AL7G36000 Arabidopsis lyrata HOM05D007268 ORTHO05D009152 1.3e-47 193.0 112 85.7
AT4G18372 Arabidopsis thaliana HOM05D007268 ORTHO05D009152 2.2e-47 192.2 112 85.7
Carub.0007s2291 Capsella rubella HOM05D007268 ORTHO05D009152 6.4e-47 190.7 110 86.4
Aa31LG6G1080 Aethionema arabicum HOM05D007268 ORTHO05D009152 1.1e-46 189.9 116 86.2
THA.LOC104798395 Tarenaya hassleriana HOM05D007268 ORTHO05D009152 1.3e-42 176.4 114 77.2
Duzib160G0929 Durio zibethinus HOM05D007268 ORTHO05D009152 4.5e-40 167.9 112 71.4
Sabra15G0149200 Salix brachista HOM05D007268 ORTHO05D009152 4.5e-40 167.9 108 75.9
Duzib235G0597 Durio zibethinus HOM05D007268 ORTHO05D009152 7.6e-40 167.2 112 72.3
Potri.015G138100 Populus trichocarpa HOM05D007268 ORTHO05D009152 9.9e-40 166.8 100 77.0
Manes.17G072200 Manihot esculenta HOM05D007268 ORTHO05D009152 1.7e-39 166.0 107 73.8
Thecc.06G148000 Theobroma cacao HOM05D007268 ORTHO05D009152 2.9e-39 165.2 112 70.5
Gohir.A10G042300 Gossypium hirsutum HOM05D007268 ORTHO05D009152 4.9e-39 164.5 112 69.6
TPR.G26254 Trifolium pratense HOM05D007268 ORTHO05D009152 4.9e-39 164.5 114 70.2
TWI53G0467 Tripterygium wilfordii HOM05D007268 ORTHO05D009152 4.9e-39 164.5 114 67.5
Gorai.011G045800 Gossypium raimondii HOM05D007268 ORTHO05D009152 6.4e-39 164.1 111 70.3
Ca_00530_v3 Cicer arietinum L. HOM05D007268 ORTHO05D009152 1.4e-38 162.9 110 71.8
Eucgr.E02425 Eucalyptus grandis HOM05D007268 ORTHO05D009152 1.4e-38 162.9 99 77.8
Gohir.D10G043200 Gossypium hirsutum HOM05D007268 ORTHO05D009152 1.9e-38 162.5 111 69.4
Cfa000925 Carpinus fangiana HOM05D007268 ORTHO05D009152 5.5e-38 161.0 114 67.5
Medtr2g019100 Medicago truncatula HOM05D007268 ORTHO05D009152 5.5e-38 161.0 109 70.6
Psat1g188600 Pisum sativum HOM05D007268 ORTHO05D009152 5.5e-38 161.0 111 70.3
PGR031G1097 Punica granatum HOM05D007268 ORTHO05D009152 5.5e-38 161.0 101 74.3
Lalb_Chr18g0055321 Lupinus albus HOM05D007268 ORTHO05D009152 7.1e-38 160.6 93 78.5
Hund21552 Selenicereus undatus HOM05D007268 ORTHO05D009152 7.1e-38 160.6 97 74.2
CiPaw.09G121900 Carya illinoinensis HOM05D007268 ORTHO05D009152 2.7e-37 158.7 110 70.0
QL05p055849 Quercus lobata HOM05D007268 ORTHO05D009152 2.7e-37 158.7 110 72.7
Sc24g0001710 Simmondsia chinensis HOM05D007268 ORTHO05D009152 2.7e-37 158.7 93 79.6
MD05G1281500 Malus domestica HOM05D007268 ORTHO05D009152 3.5e-37 158.3 110 70.0
vmacro03337 Vaccinium macrocarpon HOM05D007268 ORTHO05D009152 3.5e-37 158.3 115 67.8
CSS0021934 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 4.6e-37 157.9 114 69.3
Glyma.13G219500 Glycine max HOM05D007268 ORTHO05D009152 4.6e-37 157.9 93 77.4
Sed0026056 Sechium edule HOM05D007268 ORTHO05D009152 4.6e-37 157.9 112 66.1
Rhsim13G0115400 Rhododendron simsii HOM05D007268 ORTHO05D009152 6.0e-37 157.5 115 67.8
Ciclev10017240m.g Citrus clementina HOM05D007268 ORTHO05D009152 7.9e-37 157.1 115 65.2
FvH4_3g05282 Fragaria vesca HOM05D007268 ORTHO05D009152 7.9e-37 157.1 120 65.8
MBI02_g20985_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 1.0e-36 156.8 97 73.2
Ah.04g158630 Amaranthus hybridus HOM05D007268 ORTHO05D009152 1.8e-36 156.0 95 71.6
CSS0030281 Camellia sinensis var. sinensis HOM05D007268 ORTHO05D009152 2.3e-36 155.6 114 67.5
RcHm_v2.0_Chr5g0014441 Rosa chinensis HOM05D007268 ORTHO05D009152 2.3e-36 155.6 121 62.8
AUR62006739 Chenopodium quinoa HOM05D007268 ORTHO05D009152 3.9e-36 154.8 118 65.3
Prupe.4G083100 Prunus persica HOM05D007268 ORTHO05D009152 5.1e-36 154.5 115 69.6
CiPaw.10G090400 Carya illinoinensis HOM05D007268 ORTHO05D009152 8.7e-36 153.7 110 70.0
Nn3g20236 Nelumbo nucifera HOM05D007268 ORTHO05D009152 1.5e-35 152.9 97 71.1
Aqoxy4G02868 Aquilegia oxysepala HOM05D007268 ORTHO05D009152 1.9e-35 152.5 87 73.6
CsaV3_1G004630 Cucumis sativus L. HOM05D007268 ORTHO05D009152 2.5e-35 152.1 112 65.2
FAN25G0109 Fragaria x ananassa HOM05D007268 ORTHO05D009152 3.3e-35 151.8 120 63.3
SGA_v2.0_scaffold1G00193 Striga asiatica HOM05D007268 ORTHO05D009152 3.3e-35 151.8 100 70.0
Atru.chr10.1171 Acer truncatum HOM05D007268 ORTHO05D009152 4.3e-35 151.4 115 62.6
Dinv32234 Davidia involucrata HOM05D007268 ORTHO05D009152 5.6e-35 151.0 112 65.2
Phvul.006G166200 Phaseolus vulgaris HOM05D007268 ORTHO05D009152 9.6e-35 150.2 87 79.3
ClCG03G006700 Citrullus lanatus HOM05D007268 ORTHO05D009152 2.8e-34 148.7 112 62.5
Oeu030940.1 Olea europaea HOM05D007268 ORTHO05D009152 2.8e-34 148.7 114 63.2
Solyc08g048540.2 Solanum lycopersicum HOM05D007268 ORTHO05D009152 2.8e-34 148.7 115 63.5
Actinidia32339 Actinidia chinensis HOM05D007268 ORTHO05D009152 4.8e-34 147.9 115 64.3
DCAR_003898 Daucus carota HOM05D007268 ORTHO05D009152 4.8e-34 147.9 97 69.1
Sopen08g010950 Solanum pennellii HOM05D007268 ORTHO05D009152 6.2e-34 147.5 113 63.7
CAN.G42.16 Capsicum annuum HOM05D007268 ORTHO05D009152 1.4e-33 146.4 111 63.1
Lsat_1_v5_gn_7_27661 Lactuca sativa HOM05D007268 ORTHO05D009152 1.8e-33 146.0 88 73.9
Migut.M00895 Erythranthe guttata HOM05D007268 ORTHO05D009152 2.4e-33 145.6 102 63.7
Atru.chr4.1816 Acer truncatum HOM05D007268 ORTHO05D009152 3.1e-33 145.2 115 60.9
CAN.G500.67 Capsicum annuum HOM05D007268 ORTHO05D009152 6.9e-33 144.1 101 67.3
PGSC0003DMG400029871 Solanum tuberosum HOM05D007268 ORTHO05D009152 9.0e-33 143.7 115 61.7
Zm00001eb273860 Zea mays HOM05D007268 ORTHO05D009152 9.0e-33 143.7 97 69.1
MSTRG.7499 Avicennia marina HOM05D007268 ORTHO05D009152 1.5e-32 142.9 113 61.1
GSVIVG01035542001 Vitis vinifera HOM05D007268 ORTHO05D009152 1.5e-32 142.9 76 84.2
CANSAT21G2169 Cannabis sativa HOM05D007268 ORTHO05D009152 3.4e-32 141.7 92 68.5
ECA236G4633 Erigeron canadensis HOM05D007268 ORTHO05D009152 5.8e-32 141.0 113 60.2
unitig_92.g28163 Utricularia gibba HOM05D007268 ORTHO05D009152 2.2e-31 139.0 87 71.3
Zm00001eb224700 Zea mays HOM05D007268 ORTHO05D009152 2.2e-31 139.0 93 69.9
ATR0618G449 Amborella trichopoda HOM05D007268 ORTHO05D009152 4.9e-31 137.9 85 69.4
unitig_37.g12097 Utricularia gibba HOM05D007268 ORTHO05D009152 4.9e-31 137.9 87 71.3
MBI02_g43299_MAGBIO Magnolia biondii HOM05D007268 ORTHO05D009152 6.5e-31 137.5 76 80.3
PSO541G1787 Papaver somniferum HOM05D007268 ORTHO05D009152 1.4e-30 136.3 91 71.4
FAN16G0810 Fragaria x ananassa HOM05D007268 ORTHO05D009152 3.2e-30 135.2 107 64.5
Os06g0677600 Oryza sativa ssp. japonica HOM05D007268 ORTHO05D009152 4.2e-30 134.8 105 63.8
HanXRQChr04g0115721 Helianthus annuus HOM05D007268 ORTHO05D009152 7.1e-30 134.0 77 76.6
EL10Ac4g09469 Beta vulgaris HOM05D007268 ORTHO05D009152 1.6e-29 132.9 79 74.7
SalBow8G1886 Salvia bowleyana HOM05D007268 ORTHO05D009152 1.6e-29 132.9 76 76.3
Cc09_g08780 Coffea canephora HOM05D007268 ORTHO05D009152 2.7e-29 132.1 76 81.6
HPP92_004157 Vanilla planifolia HOM05D007268 ORTHO05D009152 4.6e-29 131.3 73 79.5
arahy.Tifrunner.gnm1.ann1.H0S66A Arachis hypogaea HOM05D007268 ORTHO05D009152 3.0e-28 128.6 89 70.8
FAN21G3321 Fragaria x ananassa HOM05D007268 ORTHO05D009152 1.1e-27 126.7 101 64.4
Solyc08g048520.1 Solanum lycopersicum HOM05D007268 ORTHO05D009152 1.5e-27 126.3 97 59.8
SEGI_36221 Sequoiadendron giganteum HOM05D007268 ORTHO05D009152 1.3e-23 113.2 97 54.6
Pp3c2_29020 Physcomitrium patens HOM05D007268 ORTHO05D009152 5.0e-23 111.3 118 42.4
Mapoly0012s0147 Marchantia polymorpha HOM05D007268 ORTHO05D009152 2.1e-21 105.9 104 47.1
SMO358G0115 Selaginella moellendorffii HOM05D007268 ORTHO05D009152 5.1e-20 101.3 88 51.1
SHI24845 Sapria himalayana HOM05D007268 ORTHO05D009152 1.3e-18 96.7 76 56.6
Nitab4.5_0005488g0010 Nicotiana tabacum HOM05D007268 ORTHO05D009152 1.0e-15 87.0 55 70.9
CBR_g29441 Chara braunii HOM05D007268 ORTHO05D009152 9.4e-14 80.5 110 38.2
PRCOL_00005812 Prasinoderma coloniale HOM05D007268 ORTHO05D009152 6.7e-12 74.3 93 45.2
MCO15G665 Micromonas commoda HOM05D007268 ORTHO05D009152 8.5e-07 57.4 72 45.8


User provided reference genes

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