Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p50280 Brassica napus HOM05D006150 ORTHO05D007745 2.3e-176 622.1 303 100.0
BraA03t14117Z Brassica rapa HOM05D006150 ORTHO05D007745 8.1e-174 613.6 303 98.7
C07p48520 Brassica napus HOM05D006150 ORTHO05D007745 2.1e-169 599.0 303 96.0
BolC7t45360H Brassica oleracea HOM05D006150 ORTHO05D007745 2.1e-169 599.0 303 96.0
C07p48460 Brassica napus HOM05D006150 ORTHO05D007745 5.1e-168 594.3 303 95.7
BcaNung04656 Brassica carinata HOM05D006150 ORTHO05D007745 1.9e-167 592.4 303 94.1
BcaC06g33538 Brassica carinata HOM05D006150 ORTHO05D007745 3.6e-166 588.2 304 95.1
C07p48390 Brassica napus HOM05D006150 ORTHO05D007745 4.5e-164 581.3 303 95.0
BraA01t01953Z Brassica rapa HOM05D006150 ORTHO05D007745 1.6e-161 572.8 304 92.8
Sp7g17140 Schrenkiella parvula HOM05D006150 ORTHO05D007745 2.1e-161 572.4 303 91.7
CARHR223610 Cardamine hirsuta HOM05D006150 ORTHO05D007745 5.1e-160 567.8 303 90.4
BcaNung00130 Brassica carinata HOM05D006150 ORTHO05D007745 8.7e-160 567.0 304 92.1
BolC1t02493H Brassica oleracea HOM05D006150 ORTHO05D007745 8.7e-160 567.0 303 92.1
AT4G17050 Arabidopsis thaliana HOM05D006150 ORTHO05D007745 1.1e-159 566.6 303 91.4
AL7G37660 Arabidopsis lyrata HOM05D006150 ORTHO05D007745 1.5e-159 566.2 303 91.1
Carub.0007s2437 Capsella rubella HOM05D006150 ORTHO05D007745 5.6e-159 564.3 303 91.1
A01p20260 Brassica napus HOM05D006150 ORTHO05D007745 4.6e-153 544.7 291 92.8
THA.LOC104807929 Tarenaya hassleriana HOM05D006150 ORTHO05D007745 6.0e-145 517.7 302 82.8
Thhalv10026866m.g Eutrema salsugineum HOM05D006150 ORTHO05D007745 1.6e-142 509.6 316 83.5
BcaC09g50439 Brassica carinata HOM05D006150 ORTHO05D007745 3.4e-140 501.9 304 84.2
C01p25410 Brassica napus HOM05D006150 ORTHO05D007745 3.4e-140 501.9 304 84.2
Gohir.A12G212700 Gossypium hirsutum HOM05D006150 ORTHO05D007745 1.4e-138 496.5 301 80.4
COL.COLO4_07285 Corchorus olitorius HOM05D006150 ORTHO05D007745 1.9e-138 496.1 294 81.3
Thecc.03G240100 Theobroma cacao HOM05D006150 ORTHO05D007745 1.2e-137 493.4 292 81.8
Gorai.008G230800 Gossypium raimondii HOM05D006150 ORTHO05D007745 3.6e-137 491.9 301 79.4
Gohir.D12G215200 Gossypium hirsutum HOM05D006150 ORTHO05D007745 3.0e-136 488.8 301 78.7
Duzib084G0008 Durio zibethinus HOM05D006150 ORTHO05D007745 5.1e-136 488.0 291 80.1
Manes.01G089000 Manihot esculenta HOM05D006150 ORTHO05D007745 8.7e-136 487.3 303 77.6
Sed0022790 Sechium edule HOM05D006150 ORTHO05D007745 3.7e-134 481.9 300 76.0
TWI60G0542 Tripterygium wilfordii HOM05D006150 ORTHO05D007745 6.3e-134 481.1 279 80.3
TAR636G1440 Trochodendron aralioides HOM05D006150 ORTHO05D007745 8.2e-134 480.7 306 75.2
Sopen08g026350 Solanum pennellii HOM05D006150 ORTHO05D007745 1.4e-133 479.9 297 76.1
Rhsim07G0136400 Rhododendron simsii HOM05D006150 ORTHO05D007745 2.4e-133 479.2 306 74.2
CAN.G572.11 Capsicum annuum HOM05D006150 ORTHO05D007745 3.1e-133 478.8 305 75.1
PGSC0003DMG400026243 Solanum tuberosum HOM05D006150 ORTHO05D007745 3.1e-133 478.8 297 75.8
Hma1.2p1_0570F.1_g180430 Hydrangea macrophylla HOM05D006150 ORTHO05D007745 5.3e-133 478.0 284 77.8
Aa31LG2G13130 Aethionema arabicum HOM05D006150 ORTHO05D007745 9.1e-133 477.2 327 74.6
RcHm_v2.0_Chr7g0205681 Rosa chinensis HOM05D006150 ORTHO05D007745 1.2e-132 476.9 299 77.3
ClCG10G005070 Citrullus lanatus HOM05D006150 ORTHO05D007745 1.5e-132 476.5 298 75.2
Ciclev10021365m.g Citrus clementina HOM05D006150 ORTHO05D007745 2.0e-132 476.1 296 76.4
CANSAT21G0710 Cannabis sativa HOM05D006150 ORTHO05D007745 2.6e-132 475.7 296 76.0
MD04G1055500 Malus domestica HOM05D006150 ORTHO05D007745 4.5e-132 474.9 296 76.0
Solyc08g077840.3 Solanum lycopersicum HOM05D006150 ORTHO05D007745 4.5e-132 474.9 297 75.4
CsaV3_3G004750 Cucumis sativus L. HOM05D006150 ORTHO05D007745 1.0e-131 473.8 298 75.5
Potri.003G083600 Populus trichocarpa HOM05D006150 ORTHO05D007745 1.0e-131 473.8 298 76.8
Lj8A277T42 Lonicera japonica HOM05D006150 ORTHO05D007745 2.9e-131 472.2 285 76.8
CSS0019555 Camellia sinensis var. sinensis HOM05D006150 ORTHO05D007745 3.8e-131 471.9 302 75.5
PSO675G6476 Papaver somniferum HOM05D006150 ORTHO05D007745 5.0e-131 471.5 303 74.9
MBI04_g13858_MAGBIO Magnolia biondii HOM05D006150 ORTHO05D007745 6.5e-131 471.1 305 75.1
EL10Ac5g12270 Beta vulgaris HOM05D006150 ORTHO05D007745 8.5e-131 470.7 294 75.2
PSO732G0290 Papaver somniferum HOM05D006150 ORTHO05D007745 1.1e-130 470.3 305 75.7
Cfa012327 Carpinus fangiana HOM05D006150 ORTHO05D007745 1.4e-130 469.9 296 76.4
MSTRG.6640 Avicennia marina HOM05D006150 ORTHO05D007745 2.5e-130 469.2 296 75.7
CiPaw.11G072300 Carya illinoinensis HOM05D006150 ORTHO05D007745 2.5e-130 469.2 297 74.4
Ah.12g053980 Amaranthus hybridus HOM05D006150 ORTHO05D007745 4.2e-130 468.4 298 74.2
Atru.chr9.1206 Acer truncatum HOM05D006150 ORTHO05D007745 5.5e-130 468.0 296 75.7
FAN04G1813 Fragaria x ananassa HOM05D006150 ORTHO05D007745 9.4e-130 467.2 296 76.4
Cc08_g11330 Coffea canephora HOM05D006150 ORTHO05D007745 6.1e-129 464.5 306 72.9
Eucgr.D02133 Eucalyptus grandis HOM05D006150 ORTHO05D007745 6.1e-129 464.5 295 76.3
Lalb_Chr09g0329771 Lupinus albus HOM05D006150 ORTHO05D007745 6.1e-129 464.5 306 74.2
FvH4_5g20400 Fragaria vesca HOM05D006150 ORTHO05D007745 1.4e-128 463.4 290 76.9
SalBow7G3619 Salvia bowleyana HOM05D006150 ORTHO05D007745 1.8e-128 463.0 285 76.5
Nn6g33757 Nelumbo nucifera HOM05D006150 ORTHO05D007745 3.9e-128 461.8 279 79.6
DCAR_008330 Daucus carota HOM05D006150 ORTHO05D007745 1.1e-127 460.3 296 74.7
ECA234G2169 Erigeron canadensis HOM05D006150 ORTHO05D007745 1.5e-127 459.9 303 73.3
FAN08G0760 Fragaria x ananassa HOM05D006150 ORTHO05D007745 1.5e-127 459.9 290 76.6
arahy.Tifrunner.gnm1.ann1.IPM3U6 Arachis hypogaea HOM05D006150 ORTHO05D007745 7.4e-127 457.6 298 72.1
Glyma.17G148400 Glycine max HOM05D006150 ORTHO05D007745 4.8e-126 454.9 296 71.6
PGR031G0533 Punica granatum HOM05D006150 ORTHO05D007745 6.3e-126 454.5 260 82.3
PSO732G0039 Papaver somniferum HOM05D006150 ORTHO05D007745 1.4e-125 453.4 274 78.1
Glyma.05G066500 Glycine max HOM05D006150 ORTHO05D007745 4.1e-125 451.8 293 72.4
arahy.Tifrunner.gnm1.ann1.YY6LCE Arachis hypogaea HOM05D006150 ORTHO05D007745 1.2e-124 450.3 298 72.1
HanXRQChr17g0534011 Helianthus annuus HOM05D006150 ORTHO05D007745 1.2e-124 450.3 304 71.4
Haze_08363 Corylus avellana HOM05D006150 ORTHO05D007745 1.5e-124 449.9 321 69.2
Nitab4.5_0009451g0030 Nicotiana tabacum HOM05D006150 ORTHO05D007745 2.6e-124 449.1 303 71.9
Nitab4.5_0000500g0240 Nicotiana tabacum HOM05D006150 ORTHO05D007745 5.9e-124 448.0 299 72.9
ATR0665G013 Amborella trichopoda HOM05D006150 ORTHO05D007745 2.2e-123 446.0 301 72.4
CDE12G0966 Ceratophyllum demersum HOM05D006150 ORTHO05D007745 3.8e-123 445.3 295 71.9
VMungo0251G1767 Vigna mungo HOM05D006150 ORTHO05D007745 3.8e-123 445.3 303 69.3
Phvul.003G225600 Phaseolus vulgaris HOM05D006150 ORTHO05D007745 1.4e-122 443.4 302 69.5
Medtr4g099290 Medicago truncatula HOM05D006150 ORTHO05D007745 2.5e-122 442.6 295 70.2
Lj4g0002003 Lotus japonicus HOM05D006150 ORTHO05D007745 3.2e-122 442.2 296 70.9
Aqoxy5G02622 Aquilegia oxysepala HOM05D006150 ORTHO05D007745 4.2e-122 441.8 311 68.8
Ca_22017_v3 Cicer arietinum L. HOM05D006150 ORTHO05D007745 5.5e-122 441.4 296 70.6
TPR.G25747 Trifolium pratense HOM05D006150 ORTHO05D007745 7.9e-121 437.6 296 70.3
unitig_746.g26644 Utricularia gibba HOM05D006150 ORTHO05D007745 1.4e-120 436.8 294 69.7
Os07g0495000 Oryza sativa ssp. japonica HOM05D006150 ORTHO05D007745 1.7e-118 429.9 304 68.8
QL12p008732 Quercus lobata HOM05D006150 ORTHO05D007745 3.7e-118 428.7 407 56.5
Zm00001eb322060 Zea mays HOM05D006150 ORTHO05D007745 1.6e-116 423.3 278 72.3
Peaxi162Scf00301g00519 Petunia axillaris HOM05D006150 ORTHO05D007745 4.5e-116 421.8 289 70.2
HPP92_025744 Vanilla planifolia HOM05D006150 ORTHO05D007745 1.1e-114 417.2 279 72.8
SEGI_33649 Sequoiadendron giganteum HOM05D006150 ORTHO05D007745 9.7e-111 404.1 301 67.1
Psat4g076080 Pisum sativum HOM05D006150 ORTHO05D007745 1.1e-109 400.6 275 69.1
Actinidia02195 Actinidia chinensis HOM05D006150 ORTHO05D007745 1.4e-109 400.2 258 73.3
Dinv28876 Davidia involucrata HOM05D006150 ORTHO05D007745 1.5e-106 390.2 246 76.8
Sc01g0007980 Simmondsia chinensis HOM05D006150 ORTHO05D007745 1.2e-105 387.1 239 76.2
vmacro00832 Vaccinium macrocarpon HOM05D006150 ORTHO05D007745 1.6e-105 386.7 296 65.9
Pp3c9_12580 Physcomitrium patens HOM05D006150 ORTHO05D007745 3.1e-101 372.5 295 63.1
Prupe.5G055300 Prunus persica HOM05D006150 ORTHO05D007745 7.2e-98 361.3 212 82.1
AagrBONN_evm.TU.Sc2ySwM_228.2274 Anthoceros agrestis HOM05D006150 ORTHO05D007745 9.5e-98 360.9 249 70.3
Mapoly0072s0097 Marchantia polymorpha HOM05D006150 ORTHO05D007745 9.5e-98 360.9 311 58.5
Oeu012348.1 Olea europaea HOM05D006150 ORTHO05D007745 1.4e-93 347.1 211 80.1
AUR62007167 Chenopodium quinoa HOM05D006150 ORTHO05D007745 8.6e-91 337.8 202 78.7
AUR62018839 Chenopodium quinoa HOM05D006150 ORTHO05D007745 1.1e-90 337.4 202 77.7
GSVIVG01003685001 Vitis vinifera HOM05D006150 ORTHO05D007745 1.1e-90 337.4 285 61.1
Lsat_1_v5_gn_3_15361 Lactuca sativa HOM05D006150 ORTHO05D007745 1.5e-87 327.0 257 66.5
SGA_v2.0_scaffold181G39680 Striga asiatica HOM05D006150 ORTHO05D007745 1.5e-87 327.0 243 68.7
Actinidia25909 Actinidia chinensis HOM05D006150 ORTHO05D007745 2.5e-74 283.1 303 51.5
MCO07G379 Micromonas commoda HOM05D006150 ORTHO05D007745 4.4e-71 272.3 269 50.6
Potri.001G150800 Populus trichocarpa HOM05D006150 ORTHO05D007745 1.1e-66 257.7 202 64.4
Cre06.g290000 Chlamydomonas reinhardtii HOM05D006150 ORTHO05D007745 7.3e-66 255.0 258 48.8
MD06G1047100 Malus domestica HOM05D006150 ORTHO05D007745 2.4e-64 250.0 270 52.2
MELO3C014174.2 Cucumis melo HOM05D006150 ORTHO05D007745 4.4e-55 219.2 291 46.7
Sabra01G0120800 Salix brachista HOM05D006150 ORTHO05D007745 8.4e-54 214.9 175 63.4
MCO04G282 Micromonas commoda HOM05D006150 ORTHO05D007745 2.7e-52 209.9 262 45.4
Hma1.2p1_0570F.1_g180440 Hydrangea macrophylla HOM05D006150 ORTHO05D007745 3.3e-50 203.0 128 72.7
FAN18G0603 Fragaria x ananassa HOM05D006150 ORTHO05D007745 9.9e-47 191.4 142 67.6
BcaC01g03436 Brassica carinata HOM05D006150 ORTHO05D007745 6.7e-43 178.7 108 80.6
CSS0048254 Camellia sinensis var. sinensis HOM05D006150 ORTHO05D007745 4.0e-40 169.5 97 82.5
Sabra01G0120600 Salix brachista HOM05D006150 ORTHO05D007745 1.1e-37 161.4 162 56.2
PSO717G0125 Papaver somniferum HOM05D006150 ORTHO05D007745 6.0e-36 155.6 93 76.3
Cpa.g.sc98.38 Carica papaya HOM05D006150 ORTHO05D007745 1.1e-32 144.8 81 79.0
CBR_g38093 Chara braunii HOM05D006150 ORTHO05D007745 1.6e-28 131.0 66 83.3
Cpa.g.sc98.35 Carica papaya HOM05D006150 ORTHO05D007745 2.6e-15 87.0 56 71.4
GSVIVG01021810001 Vitis vinifera HOM05D006150 ORTHO05D007745 3.4e-15 86.7 67 64.2
A06p15030 Brassica napus HOM05D006150 ORTHO05D096911 1.2e-07 61.6 30 93.3
Cpa.g.sc3814.1 Carica papaya HOM05D006150 ORTHO05D007745 1.2e-07 61.6 35 74.3
Lsat_1_v5_gn_6_74120 Lactuca sativa HOM05D006150 ORTHO05D233887 1.2e-07 61.6 33 78.8
Oeu040463.1 Olea europaea HOM05D001574 ORTHO05D000708 2.6e-07 60.5 57 57.9
MELO3C000773.2 Cucumis melo HOM05D006150 ORTHO05D007745 2.9e-06 57.0 37 75.7


User provided reference genes

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