Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p49960 Brassica napus HOM05D007337 ORTHO05D004972 3.1e-147 525.0 251 100.0
BraA03t14088Z Brassica rapa HOM05D007337 ORTHO05D004972 7.0e-147 523.9 251 99.6
BcaC06g33489 Brassica carinata HOM05D007337 ORTHO05D004972 1.4e-99 366.7 252 76.6
C07p47990 Brassica napus HOM05D007337 ORTHO05D004972 5.3e-86 321.6 252 69.8
BolC7t45322H Brassica oleracea HOM05D007337 ORTHO05D004972 2.1e-58 229.9 140 85.0
BcaNung02867 Brassica carinata HOM05D007337 ORTHO05D004972 8.8e-49 198.0 121 85.1
Sp7g15120 Schrenkiella parvula HOM05D007337 ORTHO05D004972 1.5e-48 197.2 244 48.4
Sp7g15130 Schrenkiella parvula HOM05D007337 ORTHO05D004972 2.6e-45 186.4 221 48.0
BolC7t45324H Brassica oleracea HOM05D007337 ORTHO05D004972 1.7e-44 183.7 257 47.5
BcaC06g33478 Brassica carinata HOM05D007337 ORTHO05D004972 6.5e-44 181.8 256 44.5
C07p47780 Brassica napus HOM05D007337 ORTHO05D004972 1.1e-43 181.0 249 44.6
AT4G16545 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 1.9e-43 180.3 254 43.3
Carub.0007s2493 Capsella rubella HOM05D007337 ORTHO05D004972 9.4e-43 177.9 254 44.1
BolC7t45302H Brassica oleracea HOM05D007337 ORTHO05D004972 3.6e-42 176.0 252 43.7
A03p49980 Brassica napus HOM05D007337 ORTHO05D004972 1.8e-41 173.7 256 43.8
BraA03t14091Z Brassica rapa HOM05D007337 ORTHO05D004972 1.8e-41 173.7 256 43.8
Thhalv10000293m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 5.2e-41 172.2 255 42.7
AL1G32140 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 6.7e-41 171.8 268 40.3
BcaC07g37998 Brassica carinata HOM05D007337 ORTHO05D004972 6.7e-41 171.8 255 40.8
BcaC09g50366 Brassica carinata HOM05D007337 ORTHO05D004972 6.7e-41 171.8 226 45.6
BcaNung00176 Brassica carinata HOM05D007337 ORTHO05D004972 6.7e-41 171.8 226 45.6
A08p12570 Brassica napus HOM05D007337 ORTHO05D004972 3.3e-40 169.5 256 41.0
BraA08t33248Z Brassica rapa HOM05D007337 ORTHO05D004972 3.3e-40 169.5 256 41.0
BcaNung02865 Brassica carinata HOM05D007337 ORTHO05D004972 7.5e-40 168.3 231 44.2
BolC8t48380H Brassica oleracea HOM05D007337 ORTHO05D004972 7.5e-40 168.3 256 41.0
Thhalv10026831m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 1.7e-39 167.2 253 41.5
THA.LOC104815492 Tarenaya hassleriana HOM05D007337 ORTHO05D004972 1.7e-39 167.2 246 43.1
BcaC06g33493 Brassica carinata HOM05D007337 ORTHO05D004972 2.8e-39 166.4 246 43.1
BraA03t14089Z Brassica rapa HOM05D007337 ORTHO05D004972 2.8e-39 166.4 256 43.8
AT2G03020 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 1.1e-38 164.5 247 41.7
C07p48000 Brassica napus HOM05D007337 ORTHO05D004972 1.1e-38 164.5 281 41.6
BcaC09g50365 Brassica carinata HOM05D007337 ORTHO05D004972 1.8e-38 163.7 237 42.2
BcaNung00177 Brassica carinata HOM05D007337 ORTHO05D004972 1.8e-38 163.7 231 42.9
A01p20860 Brassica napus HOM05D007337 ORTHO05D004972 5.3e-38 162.2 234 42.7
BraA01t02004Z Brassica rapa HOM05D007337 ORTHO05D004972 1.6e-37 160.6 235 42.1
Carub.0007s2489 Capsella rubella HOM05D007337 ORTHO05D004972 5.9e-37 158.7 268 41.0
BcaC03g13098 Brassica carinata HOM05D007337 ORTHO05D004972 7.7e-37 158.3 245 42.4
BcaC06g33490 Brassica carinata HOM05D007337 ORTHO05D004972 7.7e-37 158.3 213 46.0
A03p49970 Brassica napus HOM05D007337 ORTHO05D004972 7.7e-37 158.3 251 42.6
Thhalv10026050m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 7.7e-37 158.3 253 40.7
BolC1t02562H Brassica oleracea HOM05D007337 ORTHO05D004972 1.7e-36 157.1 235 41.7
Aa31LG2G12670 Aethionema arabicum HOM05D007337 ORTHO05D004972 6.5e-36 155.2 246 40.2
C01p26190 Brassica napus HOM05D007337 ORTHO05D004972 7.2e-35 151.8 263 37.3
AT4G16550 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 4.0e-33 146.0 249 36.9
CARHR223020 Cardamine hirsuta HOM05D007337 ORTHO05D004972 1.2e-32 144.4 250 39.2
AL7G38280 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 2.0e-32 143.7 274 34.3
AL7G38300 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 7.5e-32 141.7 279 35.8
Sp7g15150 Schrenkiella parvula HOM05D007337 ORTHO05D004972 7.5e-32 141.7 245 40.8
CARHR223030 Cardamine hirsuta HOM05D007337 ORTHO05D004972 1.3e-31 141.0 280 35.7
Carub.0007s2488 Capsella rubella HOM05D007337 ORTHO05D004972 2.2e-31 140.2 246 37.0
C02p33330 Brassica napus HOM05D007337 ORTHO05D004972 3.7e-31 139.4 250 38.0
A01p20850 Brassica napus HOM05D007337 ORTHO05D004972 6.3e-31 138.7 248 36.7
BraA01t02003Z Brassica rapa HOM05D007337 ORTHO05D004972 6.3e-31 138.7 248 35.9
BcaC03g15651 Brassica carinata HOM05D007337 ORTHO05D004972 1.1e-30 137.9 274 36.1
BolC2t09369H Brassica oleracea HOM05D007337 ORTHO05D004972 1.1e-30 137.9 274 36.1
BcaNung02864 Brassica carinata HOM05D007337 ORTHO05D004972 1.4e-30 137.5 275 34.5
Thhalv10026211m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 1.4e-30 137.5 223 40.4
C01p26180 Brassica napus HOM05D007337 ORTHO05D004972 1.8e-30 137.1 250 36.0
BcaC09g50370 Brassica carinata HOM05D007337 ORTHO05D004972 4.1e-30 136.0 250 35.2
A02p20510 Brassica napus HOM05D007337 ORTHO05D004972 4.1e-30 136.0 250 37.2
A03p49990 Brassica napus HOM05D007337 ORTHO05D004972 4.1e-30 136.0 253 36.0
BolC1t02561H Brassica oleracea HOM05D007337 ORTHO05D004972 4.1e-30 136.0 250 35.2
Carub.0007s2487 Capsella rubella HOM05D007337 ORTHO05D004972 4.1e-30 136.0 273 34.8
Sp7g15140 Schrenkiella parvula HOM05D007337 ORTHO05D004972 5.4e-30 135.6 247 39.3
C03p31540 Brassica napus HOM05D007337 ORTHO05D004972 7.0e-30 135.2 234 38.5
BolC3t15498H Brassica oleracea HOM05D007337 ORTHO05D004972 3.5e-29 132.9 232 38.4
BcaC01g04975 Brassica carinata HOM05D007337 ORTHO05D004972 3.8e-28 129.4 226 38.1
BcaC06g33494 Brassica carinata HOM05D007337 ORTHO05D004972 3.8e-28 129.4 266 34.6
AL7G38320 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 5.0e-28 129.0 271 35.4
Sp7g15160 Schrenkiella parvula HOM05D007337 ORTHO05D004972 2.5e-27 126.7 276 32.6
AT4G16560 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 3.2e-27 126.3 307 31.6
Carub.0007s2491 Capsella rubella HOM05D007337 ORTHO05D004972 1.2e-26 124.4 269 35.3
BcaC06g33497 Brassica carinata HOM05D007337 ORTHO05D004972 6.1e-26 122.1 240 37.1
Thhalv10026955m.g Eutrema salsugineum HOM05D007337 ORTHO05D004972 1.4e-25 120.9 265 32.8
BcaC09g50368 Brassica carinata HOM05D007337 ORTHO05D004972 1.8e-25 120.6 246 34.1
BcaNung00175 Brassica carinata HOM05D007337 ORTHO05D004972 1.8e-25 120.6 246 34.1
C07p48030 Brassica napus HOM05D007337 ORTHO05D004972 3.0e-25 119.8 248 37.1
BolC2t05997H Brassica oleracea HOM05D007337 ORTHO05D004972 1.2e-24 117.9 175 44.6
BolC7t45323H Brassica oleracea HOM05D007337 ORTHO05D004972 3.4e-24 116.3 91 62.6
BolC4t21835H Brassica oleracea HOM05D007337 ORTHO05D004972 4.4e-24 115.9 258 33.3
BolC4t21837H Brassica oleracea HOM05D007337 ORTHO05D004972 4.4e-24 115.9 258 33.3
BolC4t21838H Brassica oleracea HOM05D007337 ORTHO05D004972 4.4e-24 115.9 258 33.3
A03p50000 Brassica napus HOM05D007337 ORTHO05D004972 2.8e-23 113.2 240 36.2
AL7G38340 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 3.7e-23 112.8 244 35.2
THA.LOC104798375 Tarenaya hassleriana HOM05D008086 ORTHO05D004972 1.1e-22 111.3 244 30.7
AL7G38310 Arabidopsis lyrata HOM05D007337 ORTHO05D004972 1.8e-22 110.5 256 37.1
BcaC06g33495 Brassica carinata HOM05D007337 ORTHO05D004972 1.8e-22 110.5 239 36.0
BcaNung02862 Brassica carinata HOM05D007337 ORTHO05D004972 1.8e-22 110.5 239 36.0
C07p31290 Brassica napus HOM05D008086 ORTHO05D004972 3.1e-22 109.8 255 30.2
BolC7t45327H Brassica oleracea HOM05D007337 ORTHO05D004972 7.0e-22 108.6 237 36.3
BcaC06g34235 Brassica carinata HOM05D008086 ORTHO05D004972 1.6e-21 107.5 254 29.5
CARHR174690 Cardamine hirsuta HOM05D008086 ORTHO05D004972 7.7e-21 105.1 243 28.4
BcaC06g31340 Brassica carinata HOM05D008086 ORTHO05D004972 2.3e-20 103.6 194 33.0
BcaC06g34237 Brassica carinata HOM05D008086 ORTHO05D004972 5.0e-20 102.4 265 27.5
C07p31250 Brassica napus HOM05D008086 ORTHO05D004972 8.6e-20 101.7 253 28.9
BcaC06g31429 Brassica carinata HOM05D008086 ORTHO05D004972 1.1e-19 101.3 194 32.0
AL8G10380 Arabidopsis lyrata HOM05D008086 ORTHO05D004972 1.5e-19 100.9 257 32.3
BolC7t45326H Brassica oleracea HOM05D007337 ORTHO05D004972 1.9e-19 100.5 129 43.4
BcaC06g31364 Brassica carinata HOM05D008086 ORTHO05D004972 2.5e-19 100.1 264 28.0
BolC7t43666H Brassica oleracea HOM05D008086 ORTHO05D004972 2.5e-19 100.1 258 29.5
A06p44930 Brassica napus HOM05D008086 ORTHO05D004972 3.3e-19 99.8 253 28.1
BraA06t27364Z Brassica rapa HOM05D008086 ORTHO05D004972 3.3e-19 99.8 253 28.1
CARHR222970 Cardamine hirsuta HOM05D007337 ORTHO05D004972 3.3e-19 99.8 110 45.5
BcaC03g17198 Brassica carinata HOM05D008086 ORTHO05D004972 5.6e-19 99.0 248 27.8
C02p51250 Brassica napus HOM05D008086 ORTHO05D004972 5.6e-19 99.0 248 27.8
BolC2t11215H Brassica oleracea HOM05D008086 ORTHO05D004972 5.6e-19 99.0 248 27.8
BraA06t27411Z Brassica rapa HOM05D008086 ORTHO05D004972 9.5e-19 98.2 249 28.1
CARHR173760 Cardamine hirsuta HOM05D008086 ORTHO05D004972 9.5e-19 98.2 223 29.1
BcaC06g31366 Brassica carinata HOM05D008086 ORTHO05D004972 1.6e-18 97.4 252 28.6
C07p48020 Brassica napus HOM05D007337 ORTHO05D004972 1.6e-18 97.4 109 45.9
C07p30540 Brassica napus HOM05D008086 ORTHO05D004972 2.1e-18 97.1 183 32.2
A02p30530 Brassica napus HOM05D008086 ORTHO05D004972 3.6e-18 96.3 182 31.9
BcaC04g19776 Brassica carinata HOM05D008086 ORTHO05D004972 6.1e-18 95.5 183 32.2
C09p51830 Brassica napus HOM05D008086 ORTHO05D004972 6.1e-18 95.5 183 32.2
A01p41900 Brassica napus HOM05D008086 ORTHO05D004972 1.0e-17 94.7 181 32.0
C07p31230 Brassica napus HOM05D008086 ORTHO05D004972 1.4e-17 94.4 184 32.6
BraA06t27366Z Brassica rapa HOM05D008086 ORTHO05D004972 1.8e-17 94.0 184 32.6
BolC7t43664H Brassica oleracea HOM05D008086 ORTHO05D004972 2.3e-17 93.6 184 32.6
C07p30570 Brassica napus HOM05D008086 ORTHO05D004972 3.0e-17 93.2 250 29.6
Carub.0008s0020 Capsella rubella HOM05D008086 ORTHO05D004972 3.0e-17 93.2 116 41.4
CARHR173730 Cardamine hirsuta HOM05D008086 ORTHO05D004972 5.2e-17 92.4 219 26.9
A06p44950 Brassica napus HOM05D008086 ORTHO05D004972 6.8e-17 92.0 183 32.2
BolC9t58045H Brassica oleracea HOM05D008086 ORTHO05D004972 8.9e-17 91.7 183 31.7
BcaC06g34302 Brassica carinata HOM05D008086 ORTHO05D004972 2.0e-16 90.5 250 28.4
BcaC03g16909 Brassica carinata HOM05D008086 ORTHO05D004972 4.4e-16 89.4 180 31.1
AT5G47590 Arabidopsis thaliana HOM05D008086 ORTHO05D004972 7.5e-16 88.6 115 40.0
A10p16630 Brassica napus HOM05D008086 ORTHO05D004972 9.8e-16 88.2 184 32.1
CARHR183270 Cardamine hirsuta HOM05D008086 ORTHO05D004972 9.8e-16 88.2 112 35.7
QL12p012450 Quercus lobata HOM05D007337 ORTHO05D004972 9.8e-16 88.2 245 29.4
AT4G16540 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 1.3e-15 87.8 110 41.8
BolC1t05406H Brassica oleracea HOM05D008086 ORTHO05D004972 1.7e-15 87.4 183 31.1
BolC2t10843H Brassica oleracea HOM05D008086 ORTHO05D004972 1.7e-15 87.4 176 31.2
BcaC06g31356 Brassica carinata HOM05D008086 ORTHO05D004972 2.9e-15 86.7 249 26.9
Aa31LG9G5430 Aethionema arabicum HOM05D008086 ORTHO05D004972 8.3e-15 85.1 247 25.5
BraA02t08071Z Brassica rapa HOM05D008086 ORTHO05D004972 8.3e-15 85.1 175 30.3
Thhalv10001213m.g Eutrema salsugineum HOM05D008086 ORTHO05D004972 8.3e-15 85.1 213 27.7
AL8G10360 Arabidopsis lyrata HOM05D008086 ORTHO05D004972 1.1e-14 84.7 110 40.9
BolC2t10802H Brassica oleracea HOM05D008086 ORTHO05D004972 1.1e-14 84.7 245 27.8
BcaC09g48101 Brassica carinata HOM05D003507 ORTHO05D004324 2.4e-14 83.6 180 31.7
QL12p012461 Quercus lobata HOM05D008086 ORTHO05D004972 2.4e-14 83.6 246 28.5
Thecc.03G253000 Theobroma cacao HOM05D008086 ORTHO05D004972 2.4e-14 83.6 104 42.3
BcaC03g16869 Brassica carinata HOM05D008086 ORTHO05D004972 9.2e-14 81.6 112 35.7
BraA02t08074Z Brassica rapa HOM05D008086 ORTHO05D004972 1.6e-13 80.9 112 34.8
BcaC09g50367 Brassica carinata HOM05D007337 ORTHO05D004972 3.5e-13 79.7 175 35.4
CARHR173740 Cardamine hirsuta HOM05D008086 ORTHO05D004972 5.9e-13 79.0 212 27.4
AT4G16555 Arabidopsis thaliana HOM05D007337 ORTHO05D004972 1.0e-12 78.2 117 40.2
BcaNung07056 Brassica carinata HOM05D008086 ORTHO05D004972 1.0e-12 78.2 182 29.1
A02p30570 Brassica napus HOM05D008086 ORTHO05D004972 1.7e-12 77.4 112 33.9
Carub.0007s2492 Capsella rubella HOM05D007337 ORTHO05D004972 7.3e-11 72.0 92 46.7
BcaNung00180 Brassica carinata HOM05D007337 ORTHO05D004972 1.2e-10 71.2 62 61.3
CARHR223010 Cardamine hirsuta HOM05D007337 ORTHO05D004972 4.7e-10 69.3 57 54.4
CARHR215530 Cardamine hirsuta HOM05D007337 ORTHO05D004972 3.1e-09 66.6 87 46.0
A06p45430 Brassica napus HOM05D008086 ORTHO05D004972 6.8e-09 65.5 209 24.4
BraA03t14092Z Brassica rapa HOM05D007337 ORTHO05D004972 2.6e-08 63.5 92 46.7
BcaC06g34304 Brassica carinata HOM05D008086 ORTHO05D004972 4.4e-08 62.8 193 24.9
C02p48110 Brassica napus HOM05D008086 ORTHO05D004972 1.3e-07 61.2 160 27.5
BcaC03g16910 Brassica carinata HOM05D008086 ORTHO05D004972 2.9e-07 60.1 90 35.6
C02p47660 Brassica napus HOM05D008086 ORTHO05D004972 1.4e-06 57.8 96 32.3
A02p30190 Brassica napus HOM05D008086 ORTHO05D004972 7.0e-06 55.5 53 45.3
BraA02t08035Z Brassica rapa HOM05D008086 ORTHO05D004972 7.0e-06 55.5 53 45.3
COL.COLO4_37190 Corchorus olitorius HOM05D007337 ORTHO05D010560 9.2e-06 55.1 230 25.7


User provided reference genes

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