Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p49790 Brassica napus HOM05D007365 ORTHO05D009309 8.8e-91 337.0 183 100.0
BraA03t14074Z Brassica rapa HOM05D007365 ORTHO05D009309 9.8e-90 333.6 181 100.0
BolC7t45307H Brassica oleracea HOM05D007365 ORTHO05D009309 4.5e-87 324.7 180 97.8
C07p47850 Brassica napus HOM05D007365 ORTHO05D009309 3.8e-86 321.6 180 96.7
Sp7g14940 Schrenkiella parvula HOM05D007365 ORTHO05D009309 8.6e-70 267.3 185 80.0
Thhalv10026910m.g Eutrema salsugineum HOM05D007365 ORTHO05D009309 1.4e-67 260.0 183 80.3
AL7G38600 Arabidopsis lyrata HOM05D007365 ORTHO05D009309 8.6e-62 240.7 186 74.2
AT4G16410 Arabidopsis thaliana HOM05D007365 ORTHO05D009309 1.9e-61 239.6 187 73.8
Carub.0007s2512 Capsella rubella HOM05D007365 ORTHO05D009309 3.6e-60 235.3 178 75.3
CARHR222780 Cardamine hirsuta HOM05D007365 ORTHO05D009309 6.2e-60 234.6 187 73.8
BcaNung00199 Brassica carinata HOM05D007365 ORTHO05D009309 1.0e-46 190.7 183 64.5
BraA01t02028Z Brassica rapa HOM05D007365 ORTHO05D009309 2.3e-46 189.5 181 61.9
Nitab4.5_0001668g0010 Nicotiana tabacum HOM05D007365 ORTHO05D009309 1.5e-37 160.2 126 65.9
QL05p068234 Quercus lobata HOM05D007365 ORTHO05D009309 2.8e-36 156.0 107 72.0
Aqoxy1G04233 Aquilegia oxysepala HOM05D007365 ORTHO05D009309 4.8e-36 155.2 179 54.2
Lj4g0011771 Lotus japonicus HOM05D007365 ORTHO05D009309 6.2e-36 154.8 113 70.8
Prupe.4G006400 Prunus persica HOM05D007365 ORTHO05D009309 6.2e-36 154.8 193 50.8
THA.LOC104814483 Tarenaya hassleriana HOM05D007365 ORTHO05D009309 6.2e-36 154.8 193 51.3
CAN.G1156.8 Capsicum annuum HOM05D007365 ORTHO05D009309 1.8e-35 153.3 131 64.1
Haze_06998 Corylus avellana HOM05D007365 ORTHO05D009309 1.8e-35 153.3 186 53.2
Ca_21002_v3 Cicer arietinum L. HOM05D007365 ORTHO05D009309 2.4e-35 152.9 99 75.8
MD00G1057700 Malus domestica HOM05D007365 ORTHO05D009309 3.1e-35 152.5 104 73.1
GSVIVG01004669001 Vitis vinifera HOM05D007365 ORTHO05D009309 6.9e-35 151.4 108 72.2
Cfa000056 Carpinus fangiana HOM05D007365 ORTHO05D009309 1.2e-34 150.6 193 51.3
Duzib235G0282 Durio zibethinus HOM05D007365 ORTHO05D009309 1.2e-34 150.6 169 53.8
Lj2P258T31 Lonicera japonica HOM05D007365 ORTHO05D009309 1.2e-34 150.6 129 58.1
Sopen11g007370 Solanum pennellii HOM05D007365 ORTHO05D009309 1.2e-34 150.6 123 64.2
PGSC0003DMG400013294 Solanum tuberosum HOM05D007365 ORTHO05D009309 1.2e-34 150.6 123 64.2
Thecc.06G237900 Theobroma cacao HOM05D007365 ORTHO05D009309 1.5e-34 150.2 128 60.9
GSVIVG01003482001 Vitis vinifera HOM05D007365 ORTHO05D009309 2.0e-34 149.8 108 71.3
Oeu057031.1 Olea europaea HOM05D007365 ORTHO05D009309 3.4e-34 149.1 130 61.5
Glyma.17G007100 Glycine max HOM05D007365 ORTHO05D009309 4.5e-34 148.7 172 52.3
Potri.006G017500 Populus trichocarpa HOM05D007365 ORTHO05D009309 4.5e-34 148.7 115 69.6
Sabra06G0012500 Salix brachista HOM05D007365 ORTHO05D009309 4.5e-34 148.7 131 62.6
Solyc11g012640.1 Solanum lycopersicum HOM05D007365 ORTHO05D009309 4.5e-34 148.7 123 63.4
Ciclev10016816m.g Citrus clementina HOM05D007365 ORTHO05D009309 5.8e-34 148.3 108 67.6
TPR.G5966 Trifolium pratense HOM05D007365 ORTHO05D009309 7.6e-34 147.9 163 55.2
FAN21G3283 Fragaria x ananassa HOM05D007365 ORTHO05D009309 1.3e-33 147.1 149 57.0
TAR629G1651 Trochodendron aralioides HOM05D007365 ORTHO05D009309 1.3e-33 147.1 187 51.9
HanXRQChr10g0285121 Helianthus annuus HOM05D007365 ORTHO05D009309 1.7e-33 146.7 117 65.0
Lalb_Chr07g0176961 Lupinus albus HOM05D007365 ORTHO05D009309 1.7e-33 146.7 108 64.8
Nn1g07480 Nelumbo nucifera HOM05D007365 ORTHO05D009309 1.7e-33 146.7 108 68.5
Sc05g0009760 Simmondsia chinensis HOM05D007365 ORTHO05D009309 1.7e-33 146.7 132 57.6
CANSAT56G0830 Cannabis sativa HOM05D007365 ORTHO05D009309 2.2e-33 146.4 195 50.3
Psat4g002120 Pisum sativum HOM05D007365 ORTHO05D009309 2.2e-33 146.4 181 51.4
FvH4_3g00530 Fragaria vesca HOM05D007365 ORTHO05D009309 2.9e-33 146.0 149 55.7
FAN25G1820 Fragaria x ananassa HOM05D007365 ORTHO05D009309 4.9e-33 145.2 148 56.1
Gohir.A06G155600 Gossypium hirsutum HOM05D007365 ORTHO05D009309 4.9e-33 145.2 108 68.5
Gohir.D06G162000 Gossypium hirsutum HOM05D007365 ORTHO05D009309 4.9e-33 145.2 108 68.5
Gorai.010G189000 Gossypium raimondii HOM05D007365 ORTHO05D009309 4.9e-33 145.2 108 68.5
Sed0008513 Sechium edule HOM05D007365 ORTHO05D009309 6.4e-33 144.8 163 51.5
C01p26480 Brassica napus HOM05D002647 ORTHO05D032546 8.4e-33 144.4 140 63.6
Manes.08G070500 Manihot esculenta HOM05D007365 ORTHO05D009309 8.4e-33 144.4 188 52.1
Phvul.003G085500 Phaseolus vulgaris HOM05D007365 ORTHO05D009309 8.4e-33 144.4 105 68.6
ClCG01G021340 Citrullus lanatus HOM05D007365 ORTHO05D009309 1.1e-32 144.1 108 65.7
CsaV3_6G048350 Cucumis sativus L. HOM05D007365 ORTHO05D009309 1.1e-32 144.1 108 66.7
TAR629G0160 Trochodendron aralioides HOM05D007365 ORTHO05D009309 1.1e-32 144.1 92 75.0
PSO017G7035 Papaver somniferum HOM05D007365 ORTHO05D009309 1.4e-32 143.7 167 50.9
Ah.14g087440 Amaranthus hybridus HOM05D007365 ORTHO05D009309 1.9e-32 143.3 112 67.9
SGA_v2.0_scaffold7G03712 Striga asiatica HOM05D007365 ORTHO05D009309 1.9e-32 143.3 111 64.0
DCAR_030849 Daucus carota HOM05D007365 ORTHO05D009309 4.2e-32 142.1 94 74.5
MELO3C007446.2 Cucumis melo HOM05D007365 ORTHO05D009309 5.4e-32 141.7 108 64.8
RcHm_v2.0_Chr5g0000731 Rosa chinensis HOM05D007365 ORTHO05D009309 7.1e-32 141.4 159 52.2
Dinv15365 Davidia involucrata HOM05D007365 ORTHO05D009309 9.3e-32 141.0 96 70.8
Atru.chr1.2317 Acer truncatum HOM05D007365 ORTHO05D009309 1.2e-31 140.6 175 49.7
VMungo1215G0355 Vigna mungo HOM05D007365 ORTHO05D009309 2.1e-31 139.8 186 47.3
Medtr4g133770 Medicago truncatula HOM05D007365 ORTHO05D009309 2.7e-31 139.4 143 53.1
PGR004G1025 Punica granatum HOM05D007365 ORTHO05D009309 2.7e-31 139.4 111 64.0
ECA248G3442 Erigeron canadensis HOM05D000864 ORTHO05D002353 3.5e-31 139.0 144 54.2
Hma1.2p1_0657F.1_g196870 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 3.5e-31 139.0 175 48.6
Hma1.2p1_1963F.1_g309285 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 3.5e-31 139.0 175 48.6
CSS0050100 Camellia sinensis var. sinensis HOM05D007365 ORTHO05D009309 4.6e-31 138.7 175 50.3
MSTRG.7141 Avicennia marina HOM05D007365 ORTHO05D009309 7.9e-31 137.9 133 57.1
Eucgr.D01445 Eucalyptus grandis HOM05D007365 ORTHO05D009309 7.9e-31 137.9 110 66.4
Eucgr.L00170 Eucalyptus grandis HOM05D007365 ORTHO05D009309 7.9e-31 137.9 110 66.4
HPP92_007730 Vanilla planifolia HOM05D007365 ORTHO05D009309 7.9e-31 137.9 155 50.3
MBI19_g37436_MAGBIO Magnolia biondii HOM05D007365 ORTHO05D009309 1.3e-30 137.1 109 62.4
PSO170G2578 Papaver somniferum HOM05D007365 ORTHO05D009309 1.3e-30 137.1 186 42.5
unitig_37.g12181 Utricularia gibba HOM05D007365 ORTHO05D009309 1.8e-30 136.7 108 58.3
Cpa.g.sc1092.2 Carica papaya HOM05D007365 ORTHO05D009309 3.0e-30 136.0 188 44.7
TWI63G0678 Tripterygium wilfordii HOM05D007365 ORTHO05D009309 3.0e-30 136.0 161 50.3
Eucgr.D01449 Eucalyptus grandis HOM05D007365 ORTHO05D009309 3.9e-30 135.6 107 65.4
Cc09_g00550 Coffea canephora HOM05D007365 ORTHO05D009309 1.1e-29 134.0 106 64.2
Rhsim13G0142400 Rhododendron simsii HOM05D007365 ORTHO05D009309 1.5e-29 133.7 187 44.9
Migut.M01433 Erythranthe guttata HOM05D007365 ORTHO05D009309 1.9e-29 133.3 167 48.5
ATR0624G051 Amborella trichopoda HOM05D007365 ORTHO05D009309 3.3e-29 132.5 139 53.2
Lsat_1_v5_gn_1_129921 Lactuca sativa HOM05D007365 ORTHO05D009309 1.3e-28 130.6 96 66.7
BcaC09g50340 Brassica carinata HOM05D007365 ORTHO05D009309 1.6e-28 130.2 88 77.3
EL10Ac8g20243 Beta vulgaris HOM05D007365 ORTHO05D009309 2.1e-28 129.8 187 43.9
Peaxi162Scf00008g00111 Petunia axillaris HOM05D007365 ORTHO05D009309 2.4e-27 126.3 72 86.1
Glyma.07G267200 Glycine max HOM05D007365 ORTHO05D009309 6.9e-27 124.8 165 49.7
Aa31LG2G12470 Aethionema arabicum HOM05D002647 ORTHO05D000003 9.0e-27 124.4 127 59.1
Hma1.2p1_0657F.1_g196860 Hydrangea macrophylla HOM05D007365 ORTHO05D009309 1.5e-26 123.6 95 67.4
Zm00001eb380530 Zea mays HOM05D007365 ORTHO05D009309 2.6e-26 122.9 103 59.2
Zm00001eb280810 Zea mays HOM05D007365 ORTHO05D009309 4.5e-26 122.1 103 58.3
CDE02G4560 Ceratophyllum demersum HOM05D007365 ORTHO05D009309 5.5e-24 115.2 94 60.6
SEGI_39039 Sequoiadendron giganteum HOM05D007365 ORTHO05D009309 7.1e-24 114.8 98 55.1
CiPaw.09G107000 Carya illinoinensis HOM05D007365 ORTHO05D009309 1.8e-22 110.2 83 68.7
Mapoly0009s0214 Marchantia polymorpha HOM05D007365 ORTHO05D009309 2.3e-22 109.8 82 57.3
Pp3c8_24380 Physcomitrium patens HOM05D007365 ORTHO05D009309 2.8e-20 102.8 98 46.9
Os07g0607200 Oryza sativa ssp. japonica HOM05D007365 ORTHO05D009309 2.6e-18 96.3 75 60.0
A01p21190 Brassica napus HOM05D007365 ORTHO05D009309 7.6e-18 94.7 178 41.6
MD10G1337000 Malus domestica HOM05D007365 ORTHO05D009309 3.8e-17 92.4 59 76.3
CBR_g31098 Chara braunii HOM05D000019 ORTHO05D000048 1.1e-16 90.9 90 50.0
CsaV3_2G014000 Cucumis sativus L. HOM05D007365 ORTHO05D009309 4.5e-10 68.9 38 78.9
Actinidia02294 Actinidia chinensis HOM05D007365 ORTHO05D009309 2.9e-09 66.2 112 39.3
MELO3C035474.2 Cucumis melo HOM05D007365 ORTHO05D009309 1.8e-06 57.0 44 63.6


User provided reference genes

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