Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p49310 Brassica napus HOM05D002679 ORTHO05D012452 1.0e-64 250.0 130 100.0
BolC7t45265H Brassica oleracea HOM05D002679 ORTHO05D012452 1.3e-51 206.5 123 88.6
C07p47380 Brassica napus HOM05D002679 ORTHO05D012452 2.2e-51 205.7 129 86.8
BcaC06g33450 Brassica carinata HOM05D002679 ORTHO05D012452 1.1e-50 203.4 131 84.7
BraA03t14032Z Brassica rapa HOM05D002679 ORTHO05D012452 2.7e-49 198.7 115 92.2
BcaC06g33119 Brassica carinata HOM05D002679 ORTHO05D012452 8.6e-40 167.2 115 76.5
BcaC06g33274 Brassica carinata HOM05D002679 ORTHO05D012452 8.6e-40 167.2 115 76.5
BcaB01g04250 Brassica carinata HOM05D002679 ORTHO05D012452 4.7e-38 161.4 115 75.7
Carub.0006s3079 Capsella rubella HOM05D002679 ORTHO05D012452 1.4e-21 106.7 128 52.3
Carub.0006s2997 Capsella rubella HOM05D002679 ORTHO05D012452 4.9e-19 98.2 127 49.6
AT4G11700 Arabidopsis thaliana HOM05D002679 ORTHO05D012452 2.1e-17 92.8 128 48.4
AL3G49080 Arabidopsis lyrata HOM05D002679 ORTHO05D012311 1.3e-16 90.1 126 45.2
A09p39720 Brassica napus HOM05D002679 ORTHO05D012311 1.9e-15 86.3 102 54.9
AT3G25080 Arabidopsis thaliana HOM05D002679 ORTHO05D014856 4.3e-15 85.1 100 51.0
BraA09t39471Z Brassica rapa HOM05D002679 ORTHO05D012311 4.3e-15 85.1 102 53.9
AL1G40550 Arabidopsis lyrata HOM05D002679 ORTHO05D012311 9.6e-15 84.0 107 47.7
AL3G52720 Arabidopsis lyrata HOM05D002679 ORTHO05D012311 9.6e-15 84.0 125 44.8
BcaC05g26430 Brassica carinata HOM05D002679 ORTHO05D012311 9.6e-15 84.0 101 53.5
C05p24780 Brassica napus HOM05D002679 ORTHO05D012311 9.6e-15 84.0 101 53.5
BolC5t31206H Brassica oleracea HOM05D002679 ORTHO05D012311 9.6e-15 84.0 101 53.5
Carub.0007s3405 Capsella rubella HOM05D002679 ORTHO05D012311 9.6e-15 84.0 112 50.0
AL4G35970 Arabidopsis lyrata HOM05D002679 ORTHO05D012452 1.3e-14 83.6 121 46.3
Carub.0007s3406 Capsella rubella HOM05D002679 ORTHO05D012311 1.6e-14 83.2 107 50.5
Thhalv10028328m.g Eutrema salsugineum HOM05D002679 ORTHO05D012452 1.6e-14 83.2 111 46.8
CARHR133380 Cardamine hirsuta HOM05D002679 ORTHO05D012452 2.8e-14 82.4 120 46.7
AL1G56900 Arabidopsis lyrata HOM05D002679 ORTHO05D010656 4.8e-14 81.6 121 45.5
Carub.0001s3873 Capsella rubella HOM05D002679 ORTHO05D010656 4.8e-14 81.6 108 48.1
Carub.0001s3874 Capsella rubella HOM05D002679 ORTHO05D010656 4.8e-14 81.6 108 49.1
BcaC08g43156 Brassica carinata HOM05D002679 ORTHO05D012311 6.2e-14 81.3 108 50.0
C06p04390 Brassica napus HOM05D002679 ORTHO05D012311 6.2e-14 81.3 108 50.0
BolC6t35570H Brassica oleracea HOM05D002679 ORTHO05D012311 6.2e-14 81.3 108 50.0
BraA09t39473Z Brassica rapa HOM05D002679 ORTHO05D012311 6.2e-14 81.3 108 50.0
AL6G39940 Arabidopsis lyrata HOM05D002679 ORTHO05D012452 8.1e-14 80.9 107 46.7
AL4G36830 Arabidopsis lyrata HOM05D002679 ORTHO05D012452 3.1e-13 79.0 107 48.6
Carub.0006s1922 Capsella rubella HOM05D002679 ORTHO05D014856 4.0e-13 78.6 98 45.9
CARHR170750 Cardamine hirsuta HOM05D002679 ORTHO05D012311 4.0e-13 78.6 111 47.7
AL6G32810 Arabidopsis lyrata HOM05D002679 ORTHO05D014856 5.3e-13 78.2 99 46.5
Thhalv10027954m.g Eutrema salsugineum HOM05D002679 ORTHO05D012452 1.5e-12 76.6 112 48.2
Carub.0003s3390 Capsella rubella HOM05D002679 ORTHO05D012452 9.9e-12 73.9 132 43.2
Thhalv10027826m.g Eutrema salsugineum HOM05D002679 ORTHO05D012311 9.9e-12 73.9 121 43.8
Thhalv10028292m.g Eutrema salsugineum HOM05D002679 ORTHO05D012452 2.2e-11 72.8 101 48.5
Carub.0003s3340 Capsella rubella HOM05D002679 ORTHO05D012452 3.8e-11 72.0 64 60.9
Carub.0003s3450 Capsella rubella HOM05D002679 ORTHO05D012452 8.4e-11 70.9 132 42.4
AL5G38700 Arabidopsis lyrata HOM05D002679 ORTHO05D012311 1.4e-10 70.1 99 44.4
Thhalv10004573m.g Eutrema salsugineum HOM05D002679 ORTHO05D014856 1.9e-10 69.7 99 46.5
BcaC08g44542 Brassica carinata HOM05D002679 ORTHO05D012311 5.4e-10 68.2 131 42.7
Carub.0006s1923 Capsella rubella HOM05D002679 ORTHO05D014856 9.3e-10 67.4 104 43.3
AL1G35530 Arabidopsis lyrata HOM05D002679 ORTHO05D010656 1.2e-09 67.0 118 39.0
C06p20110 Brassica napus HOM05D002679 ORTHO05D010656 1.6e-09 66.6 129 43.4
BolC6t37193H Brassica oleracea HOM05D002679 ORTHO05D010656 1.6e-09 66.6 129 43.4
AL1G35520 Arabidopsis lyrata HOM05D002679 ORTHO05D010656 2.7e-09 65.9 119 38.7
CARHR073970 Cardamine hirsuta HOM05D002679 ORTHO05D012311 7.8e-09 64.3 123 39.0
AT1G22090 Arabidopsis thaliana HOM05D002679 ORTHO05D010656 1.7e-08 63.2 111 38.7
AT1G23950 Arabidopsis thaliana HOM05D002679 ORTHO05D010703 3.0e-08 62.4 134 33.6
BcaB07g34162 Brassica carinata HOM05D002679 ORTHO05D012984 1.1e-07 60.5 102 39.2
BcaC07g38453 Brassica carinata HOM05D002679 ORTHO05D010656 1.1e-07 60.5 103 35.9
C08p12220 Brassica napus HOM05D002679 ORTHO05D010656 1.9e-07 59.7 120 34.2
C08p11990 Brassica napus HOM05D002679 ORTHO05D010656 2.5e-07 59.3 103 35.9
BolC8t48863H Brassica oleracea HOM05D002679 ORTHO05D010656 2.5e-07 59.3 116 33.6
AL8G40780 Arabidopsis lyrata HOM05D002679 ORTHO05D012984 5.6e-07 58.2 105 41.0
AT3G57210 Arabidopsis thaliana HOM05D002679 ORTHO05D012311 5.6e-07 58.2 105 37.1
BcaB03g13318 Brassica carinata HOM05D002679 ORTHO05D010656 5.6e-07 58.2 103 35.0
AL3G32930 Arabidopsis lyrata HOM05D002679 ORTHO05D010703 7.3e-07 57.8 130 35.4
BcaC07g38420 Brassica carinata HOM05D002679 ORTHO05D010656 7.3e-07 57.8 103 35.0
C08p11810 Brassica napus HOM05D002679 ORTHO05D010656 7.3e-07 57.8 103 35.0
A08p35200 Brassica napus HOM05D002679 ORTHO05D010656 1.3e-06 57.0 115 33.0
BraA08t35429Z Brassica rapa HOM05D002679 ORTHO05D010656 1.3e-06 57.0 115 33.0
AT1G19060 Arabidopsis thaliana HOM05D002679 ORTHO05D010703 2.1e-06 56.2 108 36.1
BcaB04g21259 Brassica carinata HOM05D002679 ORTHO05D014856 2.8e-06 55.8 95 43.2
BcaC09g47966 Brassica carinata HOM05D002679 ORTHO05D014856 2.8e-06 55.8 95 43.2
BolC1t05512H Brassica oleracea HOM05D002679 ORTHO05D014856 2.8e-06 55.8 95 43.2
C08p11610 Brassica napus HOM05D002679 ORTHO05D010656 6.2e-06 54.7 103 33.0
C08p11660 Brassica napus HOM05D002679 ORTHO05D010656 6.2e-06 54.7 98 33.7
BolC8t48845H Brassica oleracea HOM05D002679 ORTHO05D010656 8.1e-06 54.3 103 33.0
CARHR168030 Cardamine hirsuta HOM05D002679 ORTHO05D014856 8.1e-06 54.3 111 39.6


User provided reference genes

Program Settings