Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p49160 Brassica napus HOM05D006695 ORTHO05D008239 1.9e-124 449.1 221 100.0
BraA03t14010Z Brassica rapa HOM05D006695 ORTHO05D008239 8.4e-120 433.7 221 97.3
BcaC06g32939 Brassica carinata HOM05D006695 ORTHO05D008239 2.1e-118 429.1 223 94.6
AL7G40000 Arabidopsis lyrata HOM05D006695 ORTHO05D008239 3.0e-117 425.2 223 92.8
BcaNung00267 Brassica carinata HOM05D006695 ORTHO05D008239 1.9e-116 422.5 221 92.3
AT4G15520 Arabidopsis thaliana HOM05D006695 ORTHO05D008239 3.3e-116 421.8 223 91.5
Carub.0007s2636 Capsella rubella HOM05D006695 ORTHO05D008239 5.6e-116 421.0 223 91.0
CARHR222310 Cardamine hirsuta HOM05D006695 ORTHO05D008239 2.8e-115 418.7 221 91.0
Thhalv10026193m.g Eutrema salsugineum HOM05D006695 ORTHO05D008239 6.2e-115 417.5 221 90.5
BolC1t02683H Brassica oleracea HOM05D006695 ORTHO05D008239 1.4e-114 416.4 221 90.0
A01p22050 Brassica napus HOM05D006695 ORTHO05D008239 2.4e-114 415.6 221 90.5
BraA01t02111Z Brassica rapa HOM05D006695 ORTHO05D008239 2.4e-114 415.6 221 90.5
Sp7g13770 Schrenkiella parvula HOM05D006695 ORTHO05D008239 2.4e-114 415.6 221 90.0
BcaC09g50242 Brassica carinata HOM05D006695 ORTHO05D008239 3.1e-114 415.2 221 90.0
BcaC09g50247 Brassica carinata HOM05D006695 ORTHO05D008239 3.1e-114 415.2 221 90.0
C01p27440 Brassica napus HOM05D006695 ORTHO05D008239 4.4e-113 411.4 221 89.6
BcaC06g33413 Brassica carinata HOM05D006695 ORTHO05D008239 7.9e-110 400.6 223 90.6
Aa31LG9G1920 Aethionema arabicum HOM05D006695 ORTHO05D008239 4.8e-107 391.3 214 87.9
THA.LOC104821758 Tarenaya hassleriana HOM05D006695 ORTHO05D008239 1.3e-104 383.3 222 84.7
C07p47200 Brassica napus HOM05D006695 ORTHO05D008239 7.1e-103 377.5 195 95.4
BolC7t45242H Brassica oleracea HOM05D006695 ORTHO05D008239 1.1e-100 370.2 225 84.9
Manes.03G188400 Manihot esculenta HOM05D006695 ORTHO05D008239 2.4e-98 362.5 213 83.6
Actinidia23450 Actinidia chinensis HOM05D006695 ORTHO05D008239 3.4e-97 358.6 215 80.0
PSO832G0924 Papaver somniferum HOM05D006695 ORTHO05D008239 5.8e-97 357.8 215 76.7
Hma1.2p1_0643F.1_g194500 Hydrangea macrophylla HOM05D006695 ORTHO05D008239 1.3e-96 356.7 214 82.2
CANSAT78G2164 Cannabis sativa HOM05D006695 ORTHO05D008239 4.9e-96 354.8 213 81.7
PSO210G1829 Papaver somniferum HOM05D006695 ORTHO05D008239 6.5e-96 354.4 215 75.8
Lalb_Chr12g0196371 Lupinus albus HOM05D006695 ORTHO05D008239 8.4e-96 354.0 218 76.6
Psat4g028960 Pisum sativum HOM05D006695 ORTHO05D008239 2.5e-95 352.4 220 77.7
TWI09G1388 Tripterygium wilfordii HOM05D006695 ORTHO05D008239 2.5e-95 352.4 213 80.3
VMungo1215G2645 Vigna mungo HOM05D006695 ORTHO05D008239 5.5e-95 351.3 218 78.0
QL06p006240 Quercus lobata HOM05D006695 ORTHO05D008239 7.1e-95 350.9 213 79.8
TAR362G0795 Trochodendron aralioides HOM05D006695 ORTHO05D008239 7.1e-95 350.9 213 79.3
Sed0007686 Sechium edule HOM05D006695 ORTHO05D008239 9.3e-95 350.5 220 78.2
CsaV3_3G013940 Cucumis sativus L. HOM05D006695 ORTHO05D008239 1.6e-94 349.7 220 78.2
Sc25g0004560 Simmondsia chinensis HOM05D006695 ORTHO05D008239 1.6e-94 349.7 216 77.3
TPR.G28124 Trifolium pratense HOM05D006695 ORTHO05D008239 2.1e-94 349.4 215 77.7
CSS0029139 Camellia sinensis var. sinensis HOM05D002837 ORTHO05D008239 2.7e-94 349.0 215 79.1
CiPaw.01G156500 Carya illinoinensis HOM05D006695 ORTHO05D008239 2.7e-94 349.0 216 77.3
GSVIVG01017849001 Vitis vinifera HOM05D006695 ORTHO05D008239 2.7e-94 349.0 213 77.9
Lj4g0002890 Lotus japonicus HOM05D006695 ORTHO05D008239 4.6e-94 348.2 219 76.7
PGR004G1570 Punica granatum HOM05D006695 ORTHO05D008239 4.6e-94 348.2 217 77.4
Thecc.04G272900 Theobroma cacao HOM05D006695 ORTHO05D008239 4.6e-94 348.2 220 76.4
DCAR_022857 Daucus carota HOM05D006695 ORTHO05D008239 1.3e-93 346.7 217 78.3
Cc03_g02720 Coffea canephora HOM05D006695 ORTHO05D008239 1.8e-93 346.3 214 77.1
Gorai.011G181900 Gossypium raimondii HOM05D006695 ORTHO05D008239 1.8e-93 346.3 220 76.8
Cpa.g.sc16.75 Carica papaya HOM05D006695 ORTHO05D008239 2.3e-93 345.9 217 77.9
Prupe.1G146500 Prunus persica HOM05D006695 ORTHO05D008239 2.3e-93 345.9 213 79.3
Potri.008G198200 Populus trichocarpa HOM05D006695 ORTHO05D008239 3.0e-93 345.5 217 79.3
Cfa015538 Carpinus fangiana HOM05D006695 ORTHO05D008239 3.9e-93 345.1 221 76.5
Phvul.003G098300 Phaseolus vulgaris HOM05D006695 ORTHO05D008239 3.9e-93 345.1 218 76.1
Gohir.D10G163000 Gossypium hirsutum HOM05D006695 ORTHO05D008239 5.1e-93 344.7 220 76.8
CAN.G889.4 Capsicum annuum HOM05D006695 ORTHO05D008239 6.7e-93 344.4 213 77.5
FvH4_4g16710 Fragaria vesca HOM05D006695 ORTHO05D008239 6.7e-93 344.4 213 78.9
Glyma.17G020700 Glycine max HOM05D006695 ORTHO05D008239 6.7e-93 344.4 218 76.6
Gohir.A10G105600 Gossypium hirsutum HOM05D006695 ORTHO05D008239 8.7e-93 344.0 220 76.4
Medtr4g118420 Medicago truncatula HOM05D006695 ORTHO05D008239 8.7e-93 344.0 216 75.0
MD13G1177300 Malus domestica HOM05D006695 ORTHO05D008239 1.9e-92 342.8 213 78.4
Eucgr.H03643 Eucalyptus grandis HOM05D006695 ORTHO05D008239 3.3e-92 342.0 216 76.9
MELO3C006586.2 Cucumis melo HOM05D006695 ORTHO05D008239 4.3e-92 341.7 235 72.8
RcHm_v2.0_Chr4g0420161 Rosa chinensis HOM05D006695 ORTHO05D008239 4.3e-92 341.7 213 78.4
Haze_01012 Corylus avellana HOM05D006695 ORTHO05D008239 9.6e-92 340.5 221 76.5
Duzib151G0948 Durio zibethinus HOM05D006695 ORTHO05D008239 9.6e-92 340.5 220 75.0
Peaxi162Scf00095g00413 Petunia axillaris HOM05D006695 ORTHO05D008239 9.6e-92 340.5 213 76.5
Atru.chr4.2706 Acer truncatum HOM05D006695 ORTHO05D008239 2.1e-91 339.3 217 77.9
Oeu044811.1 Olea europaea HOM05D006695 ORTHO05D008239 3.7e-91 338.6 214 76.2
Sopen01g032270 Solanum pennellii HOM05D006695 ORTHO05D008239 4.8e-91 338.2 213 75.6
PGSC0003DMG400032106 Solanum tuberosum HOM05D006695 ORTHO05D008239 4.8e-91 338.2 213 75.6
FAN22G2065 Fragaria x ananassa HOM05D006695 ORTHO05D008239 1.4e-90 336.7 211 77.3
FAN07G1129 Fragaria x ananassa HOM05D006695 ORTHO05D008239 4.1e-90 335.1 213 77.0
Solyc01g080470.3 Solanum lycopersicum HOM05D006695 ORTHO05D008239 5.3e-90 334.7 213 75.1
MSTRG.24766 Avicennia marina HOM05D006695 ORTHO05D008239 6.9e-90 334.3 214 76.2
FAN17G3101 Fragaria x ananassa HOM05D006695 ORTHO05D008239 6.9e-90 334.3 213 76.5
Ciclev10006973m.g Citrus clementina HOM05D006695 ORTHO05D008239 9.0e-90 334.0 217 76.5
Lsat_1_v5_gn_6_64520 Lactuca sativa HOM05D006695 ORTHO05D008239 2.6e-89 332.4 216 76.4
Lj3A806T51 Lonicera japonica HOM05D006695 ORTHO05D008239 2.6e-89 332.4 214 77.1
Nitab4.5_0000059g0220 Nicotiana tabacum HOM05D006695 ORTHO05D008239 2.6e-89 332.4 214 77.1
ECA233G4227 Erigeron canadensis HOM05D006695 ORTHO05D008239 3.4e-89 332.0 217 75.6
SalBow5G4654 Salvia bowleyana HOM05D006695 ORTHO05D008239 4.5e-89 331.6 214 77.6
SalBow5G4989 Salvia bowleyana HOM05D006695 ORTHO05D008239 4.5e-89 331.6 214 77.6
Aqoxy5G00568 Aquilegia oxysepala HOM05D006695 ORTHO05D008239 7.6e-89 330.9 213 75.1
Sabra08G0162200 Salix brachista HOM05D006695 ORTHO05D008239 1.3e-88 330.1 217 77.9
EL10Ac3g06533 Beta vulgaris HOM05D006695 ORTHO05D008239 2.9e-88 328.9 213 72.8
SGA_v2.0_scaffold89G27581 Striga asiatica HOM05D006695 ORTHO05D008239 2.9e-88 328.9 214 74.8
Migut.N00136 Erythranthe guttata HOM05D006695 ORTHO05D008239 2.5e-87 325.9 214 73.8
AUR62040724 Chenopodium quinoa HOM05D006695 ORTHO05D008239 3.2e-87 325.5 209 73.2
ClCG05G005600 Citrullus lanatus HOM05D006695 ORTHO05D008239 9.3e-87 323.9 205 76.6
CDE02G2295 Ceratophyllum demersum HOM05D006695 ORTHO05D008239 6.1e-86 321.2 198 75.3
Sed0005422 Sechium edule HOM05D006695 ORTHO05D008239 6.7e-85 317.8 206 76.2
HanXRQChr08g0235981 Helianthus annuus HOM05D006695 ORTHO05D008239 6.3e-83 311.2 216 69.0
unitig_8.g3083 Utricularia gibba HOM05D006695 ORTHO05D008239 1.4e-82 310.1 217 71.4
HPP92_016066 Vanilla planifolia HOM05D006695 ORTHO05D008239 2.4e-82 309.3 200 71.5
SEGI_18217 Sequoiadendron giganteum HOM05D006695 ORTHO05D008239 5.3e-82 308.1 205 71.7
CDE08G0351 Ceratophyllum demersum HOM05D006695 ORTHO05D008239 4.6e-78 295.0 216 68.1
Nitab4.5_0006860g0010 Nicotiana tabacum HOM05D006695 ORTHO05D008239 6.1e-78 294.7 215 70.2
SHI00328 Sapria himalayana HOM05D006695 ORTHO05D008239 1.8e-77 293.1 213 70.4
Zm00001eb108650 Zea mays HOM05D006695 ORTHO05D008239 8.8e-77 290.8 214 67.8
Os05g0141400 Oryza sativa ssp. japonica HOM05D006695 ORTHO05D008239 2.0e-76 289.7 217 65.4
ATR0580G301 Amborella trichopoda HOM05D006695 ORTHO05D008239 1.7e-75 286.6 205 69.8
AagrBONN_evm.TU.Sc2ySwM_228.600 Anthoceros agrestis HOM05D006695 ORTHO05D008239 2.4e-74 282.7 183 71.6
Mapoly0001s0064 Marchantia polymorpha HOM05D006695 ORTHO05D008239 9.1e-74 280.8 223 61.0
SMO347G0043 Selaginella moellendorffii HOM05D006695 ORTHO05D008239 1.3e-72 276.9 209 67.0
Pp3c22_4480 Physcomitrium patens HOM05D006695 ORTHO05D008239 3.6e-70 268.9 191 67.5
Ca_21564_v3 Cicer arietinum L. HOM05D003956 ORTHO05D004850 9.1e-66 254.2 142 86.6
FAN12G3773 Fragaria x ananassa HOM05D006695 ORTHO05D008239 2.2e-64 249.6 259 54.1
Dinv38348 Davidia involucrata HOM05D006695 ORTHO05D008239 8.5e-64 247.7 149 77.9
Hma1.2p1_0643F.1_g194510 Hydrangea macrophylla HOM05D006695 ORTHO05D008239 8.5e-64 247.7 154 77.3
vmacro08234 Vaccinium macrocarpon HOM05D006695 ORTHO05D008239 4.0e-61 238.8 147 77.6
MD16G1178900 Malus domestica HOM05D006695 ORTHO05D008239 2.7e-57 226.1 145 74.5
Cre05.g238950 Chlamydomonas reinhardtii HOM05D006695 ORTHO05D008239 3.8e-56 222.2 180 55.6
MCO16G273 Micromonas commoda HOM05D006695 ORTHO05D008239 3.5e-49 199.1 190 48.4
FAN12G1880 Fragaria x ananassa HOM05D006695 ORTHO05D008239 2.4e-42 176.4 101 85.1
PRCOL_00001113 Prasinoderma coloniale HOM05D006695 ORTHO05D008239 8.0e-38 161.4 203 46.3
SEGI_22589 Sequoiadendron giganteum HOM05D006695 ORTHO05D008239 4.4e-28 129.0 95 63.2
CBR_g29507 Chara braunii HOM05D006695 ORTHO05D008239 1.7e-24 117.1 87 62.1
arahy.Tifrunner.gnm1.ann1.5C91KI Arachis hypogaea HOM05D006695 ORTHO05D008239 1.1e-23 114.4 66 78.8
Glyma.06G247300 Glycine max HOM05D006695 ORTHO05D008239 1.5e-23 114.0 86 66.3
CBR_g29509 Chara braunii HOM05D006695 ORTHO05D008239 1.2e-22 110.9 99 55.6
ATR0235G001 Amborella trichopoda HOM05D006695 ORTHO05D008239 2.8e-22 109.8 66 77.3
MD13G1177100 Malus domestica HOM05D006695 ORTHO05D008239 1.3e-16 90.9 64 65.6
Oeu037660.1 Olea europaea HOM05D006695 ORTHO05D008239 1.9e-10 70.5 143 35.0
C09p61730 Brassica napus HOM05D006539 ORTHO05D008694 6.6e-08 62.0 201 26.9
BcaC04g24242 Brassica carinata HOM05D006539 ORTHO05D008694 8.6e-08 61.6 201 26.4
A10p23500 Brassica napus HOM05D006539 ORTHO05D008694 8.6e-08 61.6 201 26.4
BolC9t59012H Brassica oleracea HOM05D006539 ORTHO05D008694 1.9e-07 60.5 191 25.7
Thhalv10013964m.g Eutrema salsugineum HOM05D006539 ORTHO05D008694 7.3e-07 58.5 191 25.7
BraA10t44417Z Brassica rapa HOM05D006539 ORTHO05D008694 9.6e-07 58.2 199 24.1
Sp6g28700 Schrenkiella parvula HOM05D006539 ORTHO05D008694 9.6e-07 58.2 188 25.0
arahy.Tifrunner.gnm1.ann1.A7EL5Y Arachis hypogaea HOM05D003181 ORTHO05D003689 1.6e-06 57.4 41 58.5
ECA232G1677 Erigeron canadensis HOM05D006539 ORTHO05D008694 2.1e-06 57.0 199 25.1


User provided reference genes

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