Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p48310 Brassica napus HOM05D006398 ORTHO05D007983 1.2e-71 273.1 144 100.0
C07p46340 Brassica napus HOM05D006398 ORTHO05D007983 4.9e-28 128.3 105 76.2
BcaC06g33030 Brassica carinata HOM05D006398 ORTHO05D007983 2.1e-26 122.9 103 69.9
BolC7t45152H Brassica oleracea HOM05D006398 ORTHO05D007983 4.6e-26 121.7 105 73.3
Sp5g10740 Schrenkiella parvula HOM05D006398 ORTHO05D007983 4.4e-21 105.1 106 62.3
BcaNung00381 Brassica carinata HOM05D006398 ORTHO05D007983 5.8e-21 104.8 115 60.9
Thhalv10010838m.g Eutrema salsugineum HOM05D006398 ORTHO05D007983 3.8e-20 102.1 105 61.9
AT3G51500 Arabidopsis thaliana HOM05D006398 ORTHO05D007983 2.1e-18 96.3 106 59.4
C01p29040 Brassica napus HOM05D006398 ORTHO05D007983 2.1e-18 96.3 112 59.8
BolC1t02836H Brassica oleracea HOM05D006398 ORTHO05D007983 2.1e-18 96.3 112 59.8
BraA01t02248Z Brassica rapa HOM05D006398 ORTHO05D007983 6.0e-18 94.7 111 59.5
A01p23410 Brassica napus HOM05D006398 ORTHO05D007983 2.3e-17 92.8 111 58.6
CARHR161080 Cardamine hirsuta HOM05D006398 ORTHO05D007983 5.1e-17 91.7 102 55.9
BraA03t13939Z Brassica rapa HOM05D006398 ORTHO05D007983 8.1e-15 84.3 47 97.9
AL5G31940 Arabidopsis lyrata HOM05D006398 ORTHO05D007983 1.1e-14 84.0 106 57.5
Carub.0005s1788 Capsella rubella HOM05D006398 ORTHO05D007983 3.1e-14 82.4 106 50.9
Thecc.04G122700 Theobroma cacao HOM05D006398 ORTHO05D007983 3.2e-11 72.4 98 50.0
CSS0002146 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 4.2e-11 72.0 110 46.4
CSS0046434 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 5.4e-11 71.6 110 46.4
COL.COLO4_15698 Corchorus olitorius HOM05D006398 ORTHO05D007983 7.9e-10 67.8 101 46.5
Manes.02G117704 Manihot esculenta HOM05D006398 ORTHO05D007983 1.3e-09 67.0 125 41.6
Dinv19113 Davidia involucrata HOM05D006398 ORTHO05D007983 3.9e-09 65.5 93 48.4
Prupe.7G188600 Prunus persica HOM05D006398 ORTHO05D007983 5.1e-09 65.1 93 49.5
Lj4P245T44 Lonicera japonica HOM05D006398 ORTHO05D007983 6.7e-09 64.7 97 46.4
CDE04G3216 Ceratophyllum demersum HOM05D006398 ORTHO05D007983 8.7e-09 64.3 66 57.6
MD15G1226600 Malus domestica HOM05D006398 ORTHO05D007983 1.9e-08 63.2 94 46.8
Cfa000559 Carpinus fangiana HOM05D006398 ORTHO05D007983 2.5e-08 62.8 89 46.1
Actinidia28761 Actinidia chinensis HOM05D006398 ORTHO05D007983 3.3e-08 62.4 104 45.2
Atru.chr3.7 Acer truncatum HOM05D006398 ORTHO05D007983 4.3e-08 62.0 133 39.1
TAR381G1497 Trochodendron aralioides HOM05D006398 ORTHO05D007983 4.3e-08 62.0 97 45.4
Nn6g31587 Nelumbo nucifera HOM05D006398 ORTHO05D007983 5.6e-08 61.6 94 48.9
Nitab4.5_0011544g0020 Nicotiana tabacum HOM05D006398 ORTHO05D007983 5.6e-08 61.6 56 62.5
Nitab4.5_0012518g0010 Nicotiana tabacum HOM05D006398 ORTHO05D007983 5.6e-08 61.6 56 62.5
PSO017G7180 Papaver somniferum HOM05D006398 ORTHO05D007983 7.4e-08 61.2 108 41.7
CsaV3_6G047960 Cucumis sativus L. HOM05D006398 ORTHO05D007983 9.6e-08 60.8 110 39.1
Rhsim10G0190200 Rhododendron simsii HOM05D006398 ORTHO05D007983 9.6e-08 60.8 119 42.9
MBI04_g11522_MAGBIO Magnolia biondii HOM05D006398 ORTHO05D007983 1.6e-07 60.1 91 46.2
Cfa011161 Carpinus fangiana HOM05D006398 ORTHO05D007983 2.1e-07 59.7 93 44.1
CDE06G2001 Ceratophyllum demersum HOM05D006398 ORTHO05D007983 2.1e-07 59.7 105 42.9
MELO3C007985.2 Cucumis melo HOM05D006398 ORTHO05D007983 2.1e-07 59.7 111 38.7
HanXRQChr10g0316121 Helianthus annuus HOM05D006398 ORTHO05D007983 2.1e-07 59.7 56 62.5
Dinv24399 Davidia involucrata HOM05D006398 ORTHO05D007983 2.8e-07 59.3 91 44.0
Dinv28289 Davidia involucrata HOM05D006398 ORTHO05D007983 2.8e-07 59.3 91 44.0
Hma1.2p1_0085F.1_g044270 Hydrangea macrophylla HOM05D006398 ORTHO05D007983 2.8e-07 59.3 129 37.2
TPR.G33762 Trifolium pratense HOM05D006398 ORTHO05D007983 2.8e-07 59.3 99 44.4
vmacro20410 Vaccinium macrocarpon HOM05D006398 ORTHO05D007983 2.8e-07 59.3 92 42.4
DCAR_014127 Daucus carota HOM05D006398 ORTHO05D007983 3.7e-07 58.9 75 50.7
MSTRG.19082 Avicennia marina HOM05D006398 ORTHO05D007983 4.8e-07 58.5 74 48.6
Manes.01G158600 Manihot esculenta HOM05D006398 ORTHO05D007983 6.2e-07 58.2 145 37.2
SGA_v2.0_scaffold126G33784 Striga asiatica HOM05D006398 ORTHO05D007983 6.2e-07 58.2 52 63.5
MD02G1107400 Malus domestica HOM05D006398 ORTHO05D007983 8.1e-07 57.8 69 58.0
Psat2g147080 Pisum sativum HOM05D006398 ORTHO05D007983 8.1e-07 57.8 94 45.7
PGSC0003DMG400009426 Solanum tuberosum HOM05D006398 ORTHO05D007983 8.1e-07 57.8 56 58.9
FvH4_1g09810 Fragaria vesca HOM05D006398 ORTHO05D007983 1.1e-06 57.4 92 42.4
FAN19G1193 Fragaria x ananassa HOM05D006398 ORTHO05D007983 1.1e-06 57.4 92 42.4
Duzib133G0235 Durio zibethinus HOM05D006398 ORTHO05D007983 1.4e-06 57.0 98 41.8
PSO017G0885 Papaver somniferum HOM05D006398 ORTHO05D007983 1.4e-06 57.0 108 39.8
FAN26G0304 Fragaria x ananassa HOM05D006398 ORTHO05D007983 1.8e-06 56.6 92 42.4
Lalb_Chr16g0380261 Lupinus albus HOM05D006398 ORTHO05D007983 1.8e-06 56.6 127 35.4
Medtr5g025015 Medicago truncatula HOM05D006398 ORTHO05D007983 1.8e-06 56.6 93 44.1
Solyc02g068290.2 Solanum lycopersicum HOM05D006398 ORTHO05D007983 2.4e-06 56.2 122 39.3
Sopen02g017390 Solanum pennellii HOM05D006398 ORTHO05D007983 2.4e-06 56.2 122 37.7
TAR376G1029 Trochodendron aralioides HOM05D006398 ORTHO05D007983 2.4e-06 56.2 97 43.3
QL06p053503 Quercus lobata HOM05D006398 ORTHO05D007983 3.1e-06 55.8 86 46.5
Sabra16G0308300 Salix brachista HOM05D006398 ORTHO05D007983 3.1e-06 55.8 97 42.3
Sed0010545 Sechium edule HOM05D006398 ORTHO05D007983 3.1e-06 55.8 85 45.9
Ca_25041_v3 Cicer arietinum L. HOM05D006398 ORTHO05D007983 4.0e-06 55.5 131 38.2
Ah.02g115220 Amaranthus hybridus HOM05D006398 ORTHO05D007983 5.3e-06 55.1 95 43.2
Gohir.A07G076575 Gossypium hirsutum HOM05D006398 ORTHO05D007983 5.3e-06 55.1 98 39.8
Gorai.001G086400 Gossypium raimondii HOM05D006398 ORTHO05D007983 5.3e-06 55.1 98 40.8
Lsat_1_v5_gn_2_72860 Lactuca sativa HOM05D006398 ORTHO05D007983 5.3e-06 55.1 56 55.4
Oeu024785.2 Olea europaea HOM05D006398 ORTHO05D007983 6.9e-06 54.7 126 38.9
Potri.011G146400 Populus trichocarpa HOM05D006398 ORTHO05D007983 6.9e-06 54.7 136 36.0
CiPaw.03G212200 Carya illinoinensis HOM05D006398 ORTHO05D007983 9.0e-06 54.3 125 36.0
Gohir.D07G081300 Gossypium hirsutum HOM05D006398 ORTHO05D007983 9.0e-06 54.3 98 40.8


User provided reference genes

Program Settings