Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p47100 Brassica napus HOM05D003935 ORTHO05D005096 2.1e-161 572.4 310 100.0
BraA03t13837Z Brassica rapa HOM05D003935 ORTHO05D005096 1.0e-160 570.1 310 99.7
BolC7t45044H Brassica oleracea HOM05D003935 ORTHO05D005096 4.9e-158 561.2 311 90.4
C07p45210 Brassica napus HOM05D003935 ORTHO05D005096 3.2e-157 558.5 311 90.0
BcaC06g33155 Brassica carinata HOM05D003935 ORTHO05D005096 2.1e-153 545.8 314 86.9
Thhalv10004633m.g Eutrema salsugineum HOM05D003935 ORTHO05D005096 1.1e-149 533.5 314 84.4
Carub.0008s2219 Capsella rubella HOM05D003935 ORTHO05D005096 4.1e-149 531.6 314 84.7
AL8G38190 Arabidopsis lyrata HOM05D003935 ORTHO05D005096 1.2e-148 530.0 314 84.7
CARHR275270 Cardamine hirsuta HOM05D003935 ORTHO05D005096 1.6e-148 529.6 314 84.4
AT5G61500 Arabidopsis thaliana HOM05D003935 ORTHO05D005096 8.6e-147 523.9 314 83.8
Sp2g24700 Schrenkiella parvula HOM05D003935 ORTHO05D005096 1.1e-146 523.5 312 84.3
THA.LOC104819415 Tarenaya hassleriana HOM05D003935 ORTHO05D005096 1.9e-146 522.7 313 82.1
Aa31LG11G1910 Aethionema arabicum HOM05D003935 ORTHO05D005096 1.4e-144 516.5 307 82.7
Sp6g35250 Schrenkiella parvula HOM05D003935 ORTHO05D005096 1.5e-143 513.1 314 81.5
Thhalv10014155m.g Eutrema salsugineum HOM05D003935 ORTHO05D005096 9.9e-143 510.4 314 81.5
THA.LOC104801570 Tarenaya hassleriana HOM05D003935 ORTHO05D005096 2.4e-141 505.8 312 80.8
BolC2t06285H Brassica oleracea HOM05D003935 ORTHO05D005096 9.2e-141 503.8 310 80.3
BcaB05g21604 Brassica carinata HOM05D003935 ORTHO05D005096 1.2e-140 503.4 311 80.1
Duzib133G0969 Durio zibethinus HOM05D003935 ORTHO05D005096 3.5e-140 501.9 314 77.4
Manes.06G132800 Manihot esculenta HOM05D003935 ORTHO05D005096 3.5e-140 501.9 315 79.4
TWI14G1423 Tripterygium wilfordii HOM05D003935 ORTHO05D005096 2.3e-139 499.2 315 79.4
Lalb_Chr01g0000281 Lupinus albus HOM05D003935 ORTHO05D005096 5.1e-139 498.0 311 78.8
Duzib138G0818 Durio zibethinus HOM05D003935 ORTHO05D005096 6.6e-139 497.7 314 77.7
COL.COLO4_12445 Corchorus olitorius HOM05D003935 ORTHO05D005096 1.1e-138 496.9 314 78.0
Gohir.D08G159150 Gossypium hirsutum HOM05D003935 ORTHO05D005096 1.1e-138 496.9 314 77.7
Gorai.004G165200 Gossypium raimondii HOM05D003935 ORTHO05D005096 1.1e-138 496.9 314 77.7
Glyma.09G231000 Glycine max HOM05D003935 ORTHO05D005096 1.5e-138 496.5 313 78.9
Glyma.12G005700 Glycine max HOM05D003935 ORTHO05D005096 1.5e-138 496.5 313 79.2
QL04p034713 Quercus lobata HOM05D003935 ORTHO05D005096 1.9e-138 496.1 311 78.5
Thecc.01G388100 Theobroma cacao HOM05D003935 ORTHO05D005096 1.9e-138 496.1 314 77.7
Migut.F00500 Erythranthe guttata HOM05D003935 ORTHO05D005096 2.5e-138 495.7 315 77.8
Gohir.A08G137866 Gossypium hirsutum HOM05D003935 ORTHO05D005096 2.5e-138 495.7 314 77.4
Psat7g207040 Pisum sativum HOM05D003935 ORTHO05D005096 3.3e-138 495.4 311 78.1
VMungo1127G0071 Vigna mungo HOM05D003935 ORTHO05D005096 4.3e-138 495.0 311 78.1
Potri.001G126500 Populus trichocarpa HOM05D003935 ORTHO05D005096 9.6e-138 493.8 316 78.8
Medtr4g036265 Medicago truncatula HOM05D003935 ORTHO05D005096 1.2e-137 493.4 311 77.8
Potri.003G107000 Populus trichocarpa HOM05D003935 ORTHO05D005096 1.2e-137 493.4 317 78.5
Solyc06g034160.3 Solanum lycopersicum HOM05D003935 ORTHO05D005096 1.6e-137 493.0 315 78.4
Sopen06g010820 Solanum pennellii HOM05D003935 ORTHO05D005096 1.6e-137 493.0 315 78.4
GSVIVG01018224001 Vitis vinifera HOM05D003935 ORTHO05D005096 1.6e-137 493.0 315 78.1
CANSAT21G2109 Cannabis sativa HOM05D003935 ORTHO05D005096 2.8e-137 492.3 315 77.5
TPR.G3680 Trifolium pratense HOM05D003935 ORTHO05D005096 2.8e-137 492.3 311 77.8
CSS0046772 Camellia sinensis var. sinensis HOM05D003935 ORTHO05D005096 3.6e-137 491.9 315 78.7
Eucgr.K00175 Eucalyptus grandis HOM05D003935 ORTHO05D005096 3.6e-137 491.9 313 78.3
PGR142G1672 Punica granatum HOM05D003935 ORTHO05D005096 3.6e-137 491.9 313 78.3
Atru.chr1.845 Acer truncatum HOM05D003935 ORTHO05D005096 8.1e-137 490.7 312 77.2
Cpa.g.sc16.168 Carica papaya HOM05D003935 ORTHO05D005096 8.1e-137 490.7 314 77.4
Gohir.D07G154200 Gossypium hirsutum HOM05D003935 ORTHO05D005096 8.1e-137 490.7 314 76.1
Gorai.001G176400 Gossypium raimondii HOM05D003935 ORTHO05D005096 8.1e-137 490.7 314 76.1
CSS0045715 Camellia sinensis var. sinensis HOM05D003935 ORTHO05D005096 1.1e-136 490.3 315 78.1
Lalb_Chr19g0126281 Lupinus albus HOM05D003935 ORTHO05D005096 1.1e-136 490.3 313 77.6
vmacro09915 Vaccinium macrocarpon HOM05D003935 ORTHO05D005096 1.4e-136 490.0 315 78.4
Hma1.2p1_1132F.1_g260170 Hydrangea macrophylla HOM05D003935 ORTHO05D005096 1.8e-136 489.6 312 76.9
Oeu031400.2 Olea europaea HOM05D003935 ORTHO05D005096 1.8e-136 489.6 316 76.6
CAN.G330.5 Capsicum annuum HOM05D003935 ORTHO05D005096 2.4e-136 489.2 315 77.8
AUR62002246 Chenopodium quinoa HOM05D003935 ORTHO05D005096 2.4e-136 489.2 313 77.3
Nn6g33882 Nelumbo nucifera HOM05D003935 ORTHO05D005096 2.4e-136 489.2 315 77.1
Dinv16851 Davidia involucrata HOM05D003935 ORTHO05D005096 4.0e-136 488.4 315 77.8
Gohir.A07G148000 Gossypium hirsutum HOM05D003935 ORTHO05D005096 5.2e-136 488.0 314 75.8
Peaxi162Scf00304g01342 Petunia axillaris HOM05D003935 ORTHO05D005096 5.2e-136 488.0 315 77.1
BcaC03g13194 Brassica carinata HOM05D003935 ORTHO05D005096 6.9e-136 487.6 312 79.5
BraA02t04926Z Brassica rapa HOM05D003935 ORTHO05D005096 6.9e-136 487.6 315 78.7
MSTRG.27208 Avicennia marina HOM05D003935 ORTHO05D005096 8.9e-136 487.3 312 77.9
TAR374G1483 Trochodendron aralioides HOM05D003935 ORTHO05D005096 8.9e-136 487.3 315 76.8
Nitab4.5_0000448g0060 Nicotiana tabacum HOM05D003935 ORTHO05D005096 1.2e-135 486.9 315 78.1
SalBow1G3743 Salvia bowleyana HOM05D003935 ORTHO05D005096 1.2e-135 486.9 315 76.5
ClCG06G002480 Citrullus lanatus HOM05D003935 ORTHO05D005096 2.0e-135 486.1 314 76.8
Actinidia01047 Actinidia chinensis HOM05D003935 ORTHO05D005096 2.6e-135 485.7 313 78.0
MELO3C022280.2 Cucumis melo HOM05D003935 ORTHO05D005096 2.6e-135 485.7 314 76.4
PGSC0003DMG400021594 Solanum tuberosum HOM05D003935 ORTHO05D005096 2.6e-135 485.7 315 77.1
Cfa012922 Carpinus fangiana HOM05D003935 ORTHO05D005096 3.4e-135 485.3 314 77.7
Phvul.011G006500 Phaseolus vulgaris HOM05D003935 ORTHO05D005096 3.4e-135 485.3 311 76.8
CiPaw.14G023500 Carya illinoinensis HOM05D003935 ORTHO05D005096 4.4e-135 485.0 312 76.9
Aqoxy7G00829 Aquilegia oxysepala HOM05D003935 ORTHO05D005096 5.8e-135 484.6 313 76.0
CsaV3_6G008640 Cucumis sativus L. HOM05D003935 ORTHO05D005096 7.6e-135 484.2 314 76.8
arahy.Tifrunner.gnm1.ann1.YZL4IN Arachis hypogaea HOM05D003935 ORTHO05D005096 1.3e-134 483.4 309 77.7
PSO782G0781 Papaver somniferum HOM05D003935 ORTHO05D005096 1.3e-134 483.4 314 77.1
Prupe.2G123000 Prunus persica HOM05D003935 ORTHO05D005096 1.3e-134 483.4 310 76.5
SGA_v2.0_scaffold44G16558 Striga asiatica HOM05D003935 ORTHO05D005096 1.3e-134 483.4 313 76.4
RcHm_v2.0_Chr1g0346321 Rosa chinensis HOM05D003935 ORTHO05D005096 2.2e-134 482.6 311 77.2
Hma1.2p1_0432F.1_g151940 Hydrangea macrophylla HOM05D003935 ORTHO05D005096 2.9e-134 482.3 313 77.0
FvH4_7g09530 Fragaria vesca HOM05D003935 ORTHO05D005096 3.8e-134 481.9 313 77.0
FAN06G5089 Fragaria x ananassa HOM05D003935 ORTHO05D005096 3.8e-134 481.9 313 77.0
MD02G1218100 Malus domestica HOM05D003935 ORTHO05D005096 3.8e-134 481.9 310 76.8
PSO063G2499 Papaver somniferum HOM05D003935 ORTHO05D005096 4.9e-134 481.5 314 76.8
Sed0016106 Sechium edule HOM05D003935 ORTHO05D005096 4.9e-134 481.5 314 76.4
MSTRG.8834 Avicennia marina HOM05D003935 ORTHO05D005096 6.4e-134 481.1 313 76.0
Ca_12623_v3 Cicer arietinum L. HOM05D003935 ORTHO05D005096 6.4e-134 481.1 311 85.2
FAN03G1633 Fragaria x ananassa HOM05D003935 ORTHO05D005096 6.4e-134 481.1 313 77.0
FAN06G4162 Fragaria x ananassa HOM05D003935 ORTHO05D005096 6.4e-134 481.1 313 77.0
Sabra01G0097600 Salix brachista HOM05D003935 ORTHO05D005096 8.4e-134 480.7 314 76.8
FAN10G2569 Fragaria x ananassa HOM05D003935 ORTHO05D005096 1.1e-133 480.3 313 76.7
FAN10G4028 Fragaria x ananassa HOM05D003935 ORTHO05D005096 1.1e-133 480.3 313 76.7
FAN01G1603 Fragaria x ananassa HOM05D003935 ORTHO05D005096 1.4e-133 479.9 313 76.4
Lj3g0013928 Lotus japonicus HOM05D003935 ORTHO05D005096 1.9e-133 479.6 315 75.9
Rhsim09G0190400 Rhododendron simsii HOM05D003935 ORTHO05D005096 2.4e-133 479.2 330 74.5
C02p03220 Brassica napus HOM05D004498 ORTHO05D005300 3.2e-133 478.8 308 78.6
HanXRQChr15g0485951 Helianthus annuus HOM05D003935 ORTHO05D005096 4.2e-133 478.4 315 74.3
Aa31LG3G18800 Aethionema arabicum HOM05D003935 ORTHO05D005096 1.2e-132 476.9 309 78.6
Nitab4.5_0000262g0090 Nicotiana tabacum HOM05D003935 ORTHO05D005096 1.2e-132 476.9 315 77.8
DCAR_020181 Daucus carota HOM05D003935 ORTHO05D005096 2.3e-131 472.6 314 73.9
Lj1C977G12 Lonicera japonica HOM05D003935 ORTHO05D005096 2.3e-131 472.6 338 71.6
HanXRQChr16g0512861 Helianthus annuus HOM05D003935 ORTHO05D005096 2.5e-130 469.2 318 72.6
arahy.Tifrunner.gnm1.ann1.16SP4W Arachis hypogaea HOM05D003935 ORTHO05D005096 1.3e-129 466.8 320 73.4
Haze_21276 Corylus avellana HOM05D003935 ORTHO05D005096 1.6e-129 466.5 320 74.4
arahy.Tifrunner.gnm1.ann1.2B4GQV Arachis hypogaea HOM05D003935 ORTHO05D005096 4.8e-129 464.9 305 75.7
Lsat_1_v5_gn_5_9340 Lactuca sativa HOM05D003935 ORTHO05D005096 4.8e-129 464.9 315 72.1
Sabra03G0073800 Salix brachista HOM05D003935 ORTHO05D005096 4.8e-129 464.9 383 65.5
QL02p025668 Quercus lobata HOM05D003935 ORTHO05D005096 8.1e-129 464.2 313 74.4
unitig_37.g12492 Utricularia gibba HOM05D003935 ORTHO05D005096 2.4e-128 462.6 312 75.6
arahy.Tifrunner.gnm1.ann1.9TCX0P Arachis hypogaea HOM05D003935 ORTHO05D005096 5.8e-127 458.0 317 72.9
CDE04G2838 Ceratophyllum demersum HOM05D003935 ORTHO05D005096 2.9e-126 455.7 307 74.3
Actinidia13591 Actinidia chinensis HOM05D003935 ORTHO05D005096 3.8e-126 455.3 309 74.4
Cc02_g04470 Coffea canephora HOM05D003935 ORTHO05D005096 4.9e-126 454.9 317 71.6
Ciclev10005442m.g Citrus clementina HOM05D003935 ORTHO05D005096 6.4e-126 454.5 316 73.4
Rhsim03G0165100 Rhododendron simsii HOM05D003935 ORTHO05D005096 6.4e-126 454.5 334 70.4
BcaC06g33158 Brassica carinata HOM05D003935 ORTHO05D005096 3.2e-125 452.2 257 87.9
Mapoly0003s0208 Marchantia polymorpha HOM05D003935 ORTHO05D005096 7.4e-122 441.0 315 69.2
Hund04562 Selenicereus undatus HOM05D003935 ORTHO05D005096 4.8e-121 438.3 309 71.2
Os01g0200000 Oryza sativa ssp. japonica HOM05D003935 ORTHO05D005096 1.1e-120 437.2 311 71.7
Pp3c8_11900 Physcomitrium patens HOM05D003935 ORTHO05D005096 5.3e-120 434.9 307 68.4
ECA232G4201 Erigeron canadensis HOM05D003935 ORTHO05D005096 3.4e-119 432.2 295 71.2
EL10Ac3g05885 Beta vulgaris HOM05D003935 ORTHO05D005096 5.8e-119 431.4 285 74.4
Ah.07g207480 Amaranthus hybridus HOM05D003935 ORTHO05D005096 7.1e-117 424.5 288 72.9
Haze_02753 Corylus avellana HOM05D003935 ORTHO05D005096 9.3e-117 424.1 462 51.9
Zm00001eb391210 Zea mays HOM05D003935 ORTHO05D005096 7.9e-116 421.0 308 75.6
CiPaw.07G237000 Carya illinoinensis HOM05D003935 ORTHO05D005096 3.3e-114 415.6 329 66.0
Lsat_1_v5_gn_9_51820 Lactuca sativa HOM05D003935 ORTHO05D005096 1.1e-112 410.6 312 66.7
Sc10g0008570 Simmondsia chinensis HOM05D003935 ORTHO05D005096 1.4e-112 410.2 279 73.5
SMO134G0003 Selaginella moellendorffii HOM05D003935 ORTHO05D005096 4.5e-111 405.2 309 67.0
Nitab4.5_0001267g0110 Nicotiana tabacum HOM05D003935 ORTHO05D005096 4.9e-110 401.7 282 71.6
ATR0057G070 Amborella trichopoda HOM05D003935 ORTHO05D005096 4.1e-104 382.1 282 67.0
Actinidia24986 Actinidia chinensis HOM05D003935 ORTHO05D005096 2.0e-95 353.2 241 73.9
AUR62015457 Chenopodium quinoa HOM05D003935 ORTHO05D005096 3.5e-79 299.3 214 70.1
Cre02.g102350 Chlamydomonas reinhardtii HOM05D003935 ORTHO05D005096 2.2e-70 270.0 305 48.2
MCO14G260 Micromonas commoda HOM05D003935 ORTHO05D005096 1.9e-69 266.9 307 47.9
MD07G1099100 Malus domestica HOM05D003935 ORTHO05D005096 1.2e-68 264.2 188 68.6
CBR_g28076 Chara braunii HOM05D003935 ORTHO05D000002 2.7e-68 263.1 252 55.2
Nitab4.5_0001358g0020 Nicotiana tabacum HOM05D003935 ORTHO05D005096 3.1e-64 249.6 157 75.2
Dinv06578 Davidia involucrata HOM05D003935 ORTHO05D005096 5.4e-64 248.8 157 76.4
arahy.Tifrunner.gnm1.ann1.VY970J Arachis hypogaea HOM05D003935 ORTHO05D005096 7.2e-61 238.4 126 89.7
PRCOL_00004022 Prasinoderma coloniale HOM05D003935 ORTHO05D005096 2.8e-60 236.5 296 49.7
AagrBONN_evm.TU.Sc2ySwM_369.216 Anthoceros agrestis HOM05D003935 ORTHO05D005096 3.4e-58 229.6 271 48.0
Haze_27326 Corylus avellana HOM05D003935 ORTHO05D005096 1.3e-57 227.6 304 41.8
CsaV3_4G004080 Cucumis sativus L. HOM05D003935 ORTHO05D044846 1.2e-55 221.1 284 46.1
Nitab4.5_0001358g0040 Nicotiana tabacum HOM05D003935 ORTHO05D001473 6.8e-51 205.3 98 98.0
SEGI_20183 Sequoiadendron giganteum HOM05D003935 ORTHO05D005096 1.5e-50 204.1 189 55.0
arahy.Tifrunner.gnm1.ann1.XHAQ77 Arachis hypogaea HOM05D003935 ORTHO05D005096 3.7e-49 199.5 181 60.8
Os10g0560450 Oryza sativa ssp. japonica HOM05D003935 ORTHO05D005096 4.9e-49 199.1 181 58.0
BcaB05g21605 Brassica carinata HOM05D003935 ORTHO05D005096 1.0e-46 191.4 149 67.8
Nn051s41922 Nelumbo nucifera HOM05D003935 ORTHO05D005096 2.3e-46 190.3 152 61.8
Nn1g09078 Nelumbo nucifera HOM05D003935 ORTHO05D005096 2.3e-46 190.3 152 61.8
Zm00001eb216570 Zea mays HOM05D003935 ORTHO05D005096 5.0e-46 189.1 126 71.4
SEGI_13739 Sequoiadendron giganteum HOM05D003935 ORTHO05D005096 2.1e-44 183.7 103 83.5
Zm00001eb363440 Zea mays HOM05D003935 ORTHO05D005096 6.2e-44 182.2 109 78.9
MELO3C032833.2 Cucumis melo HOM05D003935 ORTHO05D044846 1.4e-43 181.0 298 40.9
Zm00001eb003720 Zea mays HOM05D003935 ORTHO05D005096 2.3e-43 180.3 109 78.0
Zm00001eb078430 Zea mays HOM05D003935 ORTHO05D005096 2.3e-43 180.3 109 78.0
AL7G47000 Arabidopsis lyrata HOM05D003935 ORTHO05D003430 1.3e-41 174.5 103 84.5
Lj2A404G32 Lonicera japonica HOM05D000092 ORTHO05D000042 4.7e-36 156.0 273 34.1
BcaB01g00746 Brassica carinata HOM05D003935 ORTHO05D005096 2.3e-30 137.1 107 64.5
Rhsim01G0073400 Rhododendron simsii HOM05D003935 ORTHO05D005096 1.1e-29 134.8 146 52.7
Rhsim06G0236800 Rhododendron simsii HOM05D003935 ORTHO05D005096 7.3e-29 132.1 139 53.2
A09p20840 Brassica napus HOM05D000772 ORTHO05D003239 1.2e-23 114.8 79 70.9
BraA09t37687Z Brassica rapa HOM05D000772 ORTHO05D003239 1.2e-23 114.8 79 70.9
Rhsim11G0131000 Rhododendron simsii HOM05D003935 ORTHO05D005096 6.0e-23 112.5 179 40.8
MD07G1099000 Malus domestica HOM05D003935 ORTHO05D005096 8.7e-22 108.6 56 87.5
BcaC04g19029 Brassica carinata HOM05D003935 ORTHO05D005096 3.3e-21 106.7 113 55.8
CBR_g28077 Chara braunii HOM05D003935 ORTHO05D005096 1.6e-20 104.4 72 65.3
SEGI_32586 Sequoiadendron giganteum HOM05D003935 ORTHO05D005096 1.6e-20 104.4 54 85.2
Lj9A23G20 Lonicera japonica HOM05D000092 ORTHO05D000042 9.0e-19 98.6 116 44.0
arahy.Tifrunner.gnm1.ann1.W2J7UU Arachis hypogaea HOM05D003935 ORTHO05D023770 2.4e-16 90.5 52 78.8
SalBow2G0135 Salvia bowleyana HOM05D003935 ORTHO05D357983 5.4e-16 89.4 47 85.1
C03p26610 Brassica napus HOM05D003935 ORTHO05D023770 7.1e-16 89.0 52 78.8
Zm00001eb269920 Zea mays HOM05D001580 ORTHO05D001517 2.1e-15 87.4 52 80.8
BcaC03g17887 Brassica carinata HOM05D003935 ORTHO05D005096 2.3e-14 84.0 43 90.7
Rhsim06G0096100 Rhododendron simsii HOM05D003935 ORTHO05D005096 1.6e-12 77.8 120 42.5
Actinidia10778 Actinidia chinensis HOM05D003935 ORTHO05D005096 4.9e-09 66.2 75 54.7
BcaC09g49081 Brassica carinata HOM05D003935 ORTHO05D091498 7.9e-07 58.9 54 63.0
Zm00001eb395010 Zea mays HOM05D034860 ORTHO05D442630 1.8e-06 57.8 36 63.9
BcaC02g10492 Brassica carinata HOM05D036142 ORTHO05D023770 5.1e-06 56.2 28 92.9
C04p28240 Brassica napus HOM05D036142 ORTHO05D023770 5.1e-06 56.2 28 92.9
BolC4t24369H Brassica oleracea HOM05D036142 ORTHO05D023770 5.1e-06 56.2 28 92.9


User provided reference genes

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