Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p45770 Brassica napus HOM05D011623 ORTHO05D013234 0.0e+00 1570.1 777 100.0
BcaB03g16862 Brassica carinata HOM05D013356 ORTHO05D013234 9.6e-86 322.4 567 40.2
BcaC08g43555 Brassica carinata HOM05D011623 ORTHO05D027331 2.4e-84 317.8 777 35.0
BcaB04g17563 Brassica carinata HOM05D037002 ORTHO05D032729 4.6e-72 276.9 629 33.5
BcaB03g15469 Brassica carinata HOM05D011623 ORTHO05D013234 1.7e-71 275.0 275 58.5
BcaC07g40239 Brassica carinata HOM05D013356 ORTHO05D013234 1.3e-66 258.8 576 36.1
A01p23070 Brassica napus HOM05D011623 ORTHO05D027331 2.9e-66 257.7 745 31.8
A01p09210 Brassica napus HOM05D011623 ORTHO05D027331 8.1e-61 239.6 734 31.1
BraA03t10128Z Brassica rapa HOM05D011623 ORTHO05D013234 4.9e-58 230.3 190 64.7
C02p00610 Brassica napus HOM05D011623 ORTHO05D013234 5.5e-57 226.9 190 63.7
BcaC07g40310 Brassica carinata HOM05D013356 ORTHO05D013234 2.0e-51 208.4 193 60.1
BcaC02g09959 Brassica carinata HOM05D030396 ORTHO05D013234 4.2e-33 147.5 450 31.8
C08p28580 Brassica napus HOM05D011623 ORTHO05D013234 6.7e-31 140.2 156 49.4
C04p34620 Brassica napus HOM05D030396 ORTHO05D013234 2.6e-30 138.3 160 51.9
Sp2g05270 Schrenkiella parvula HOM05D011623 ORTHO05D013234 2.6e-30 138.3 294 37.1
BcaC09g49673 Brassica carinata HOM05D011623 ORTHO05D013234 2.1e-24 118.6 106 61.3
BcaNung06303 Brassica carinata HOM05D013356 ORTHO05D013234 2.1e-24 118.6 83 68.7
BraA02t08130Z Brassica rapa HOM05D011623 ORTHO05D013234 6.1e-24 117.1 96 60.4
BcaC03g16415 Brassica carinata HOM05D013356 ORTHO05D095425 9.7e-22 109.8 95 61.1
BcaNung05390 Brassica carinata HOM05D013356 ORTHO05D095310 1.2e-19 102.8 87 60.9
BcaB01g00527 Brassica carinata HOM05D013356 ORTHO05D013234 1.8e-12 79.0 67 68.7
BcaNung05392 Brassica carinata HOM05D013356 ORTHO05D013234 1.8e-12 79.0 67 68.7
Carub.0008s1808 Capsella rubella HOM05D000930 ORTHO05D000748 1.8e-12 79.0 89 49.4
BcaC03g16416 Brassica carinata HOM05D011623 ORTHO05D039839 2.5e-09 68.6 53 67.9
AL701U10020 Arabidopsis lyrata HOM05D011085 ORTHO05D013451 1.0e-07 63.2 227 27.8
AL6G35150 Arabidopsis lyrata HOM05D011085 ORTHO05D013451 1.8e-07 62.4 150 30.0
Thhalv10000586m.g Eutrema salsugineum HOM05D060088 ORTHO05D045359 1.8e-07 62.4 62 51.6
BcaC02g10819 Brassica carinata HOM05D037002 ORTHO05D032729 3.0e-07 61.6 141 35.5
C04p24890 Brassica napus HOM05D037002 ORTHO05D032729 3.0e-07 61.6 141 35.5
AL239U10010 Arabidopsis lyrata HOM05D001300 ORTHO05D013451 6.8e-07 60.5 50 56.0
AL7G39160 Arabidopsis lyrata HOM05D011085 ORTHO05D013451 1.5e-06 59.3 62 46.8
BcaB03g16825 Brassica carinata HOM05D000834 ORTHO05D000909 5.7e-06 57.4 80 45.0


User provided reference genes

Program Settings