Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p45610 Brassica napus HOM05D004816 ORTHO05D006043 1.8e-266 922.2 512 100.0
BraA03t13693Z Brassica rapa HOM05D004816 ORTHO05D006043 1.1e-252 876.3 517 95.4
BcaC01g03051 Brassica carinata HOM05D004816 ORTHO05D006043 4.9e-248 860.9 512 90.8
C03p56660 Brassica napus HOM05D004816 ORTHO05D006043 4.9e-248 860.9 512 90.8
BolC3t17950H Brassica oleracea HOM05D004816 ORTHO05D006043 1.4e-247 859.4 522 89.3
BcaB08g34612 Brassica carinata HOM05D004816 ORTHO05D006043 1.9e-239 832.4 511 90.8
Sp3g29160 Schrenkiella parvula HOM05D004816 ORTHO05D006043 6.9e-226 787.3 524 81.9
C07p07890 Brassica napus HOM05D004816 ORTHO05D006043 5.5e-215 751.1 509 81.1
BolC7t41207H Brassica oleracea HOM05D004816 ORTHO05D006043 5.5e-215 751.1 509 81.1
Thhalv10022638m.g Eutrema salsugineum HOM05D004816 ORTHO05D006043 5.5e-215 751.1 540 81.7
AL3G47650 Arabidopsis lyrata HOM05D004816 ORTHO05D006043 7.2e-215 750.7 518 80.3
BraA07t28285Z Brassica rapa HOM05D004816 ORTHO05D006043 1.0e-213 746.9 515 80.6
AT2G15860 Arabidopsis thaliana HOM05D004816 ORTHO05D006043 3.0e-213 745.3 523 80.3
CARHR106200 Cardamine hirsuta HOM05D004816 ORTHO05D006043 3.0e-213 745.3 523 82.8
BcaB03g16336 Brassica carinata HOM05D004816 ORTHO05D006043 3.1e-210 735.3 522 79.3
BcaC06g36093 Brassica carinata HOM05D004816 ORTHO05D006043 5.3e-210 734.6 509 80.0
Carub.0003s2975 Capsella rubella HOM05D004816 ORTHO05D006043 6.5e-208 727.6 525 78.9
Aa31LG8G13390 Aethionema arabicum HOM05D004816 ORTHO05D006043 9.4e-199 697.2 511 74.6
A07p04930 Brassica napus HOM05D004816 ORTHO05D006043 5.7e-180 634.8 392 86.0
THA.LOC104807346 Tarenaya hassleriana HOM05D004816 ORTHO05D006043 2.5e-175 619.4 508 71.5
THA.LOC104819592 Tarenaya hassleriana HOM05D004816 ORTHO05D006043 2.3e-165 586.3 478 69.0
Cfa004941 Carpinus fangiana HOM05D004816 ORTHO05D006043 2.6e-156 556.2 545 59.1
MD10G1088000 Malus domestica HOM05D004816 ORTHO05D006043 2.7e-153 546.2 536 64.7
Atru.chr5.2842 Acer truncatum HOM05D004816 ORTHO05D006043 7.8e-153 544.7 524 60.9
GSVIVG01031842001 Vitis vinifera HOM05D004816 ORTHO05D006043 7.8e-153 544.7 519 60.3
Dinv23600 Davidia involucrata HOM05D004816 ORTHO05D006043 3.0e-152 542.7 501 61.9
Manes.17G095600 Manihot esculenta HOM05D004816 ORTHO05D006043 1.9e-151 540.0 527 63.6
QL11p039002 Quercus lobata HOM05D004816 ORTHO05D006043 1.9e-151 540.0 511 61.6
Thecc.02G094000 Theobroma cacao HOM05D004816 ORTHO05D006043 2.5e-151 539.7 503 65.0
QL11p040287 Quercus lobata HOM05D004816 ORTHO05D006043 4.3e-151 538.9 512 61.3
arahy.Tifrunner.gnm1.ann1.WD2X18 Arachis hypogaea HOM05D004816 ORTHO05D006043 6.2e-150 535.0 520 60.6
Potri.009G107800 Populus trichocarpa HOM05D004816 ORTHO05D006043 2.3e-149 533.1 482 64.9
arahy.Tifrunner.gnm1.ann1.D5RGK8 Arachis hypogaea HOM05D004816 ORTHO05D006043 3.1e-149 532.7 520 60.6
CSS0036891 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 1.2e-148 530.8 497 60.6
COL.COLO4_11733 Corchorus olitorius HOM05D004816 ORTHO05D006043 2.6e-148 529.6 479 65.8
Duzib132G0866 Durio zibethinus HOM05D004816 ORTHO05D006043 9.9e-148 527.7 504 64.3
Nn6g32127 Nelumbo nucifera HOM05D004816 ORTHO05D006043 3.2e-146 522.7 529 59.2
Ca_12466_v3 Cicer arietinum L. HOM05D004816 ORTHO05D006043 4.1e-146 522.3 530 57.4
Duzib248G0025 Durio zibethinus HOM05D004816 ORTHO05D006043 4.1e-146 522.3 509 59.7
Phvul.003G011700 Phaseolus vulgaris HOM05D004816 ORTHO05D006043 1.2e-145 520.8 525 57.1
Glyma.20G009200 Glycine max HOM05D004816 ORTHO05D006043 3.5e-145 519.2 526 57.0
Gohir.D12G026300 Gossypium hirsutum HOM05D004816 ORTHO05D006043 6.0e-145 518.5 527 61.3
Lalb_Chr10g0095411 Lupinus albus HOM05D004816 ORTHO05D006043 6.0e-145 518.5 497 59.4
Sabra09G0082300 Salix brachista HOM05D004816 ORTHO05D006043 7.8e-145 518.1 526 58.6
Gorai.008G026600 Gossypium raimondii HOM05D004816 ORTHO05D006043 1.3e-144 517.3 527 61.1
MD05G1073700 Malus domestica HOM05D004816 ORTHO05D006043 2.3e-144 516.5 529 61.4
CiPaw.06G139500 Carya illinoinensis HOM05D004816 ORTHO05D006043 5.1e-144 515.4 532 57.5
Gohir.A12G026800 Gossypium hirsutum HOM05D004816 ORTHO05D006043 5.6e-143 511.9 515 62.1
CANSAT25G1860 Cannabis sativa HOM05D004816 ORTHO05D006043 1.2e-142 510.8 528 58.7
Ciclev10028431m.g Citrus clementina HOM05D004816 ORTHO05D006043 2.8e-142 509.6 463 64.8
PSO675G8525 Papaver somniferum HOM05D004816 ORTHO05D006043 8.1e-142 508.1 524 60.1
Aqoxy6G00919 Aquilegia oxysepala HOM05D004816 ORTHO05D006043 1.4e-141 507.3 496 58.7
Psat6g096400 Pisum sativum HOM05D004816 ORTHO05D006043 1.8e-141 506.9 523 57.0
Eucgr.I01207 Eucalyptus grandis HOM05D004816 ORTHO05D006043 7.6e-140 501.5 487 61.8
Lj5A205G67 Lonicera japonica HOM05D004816 ORTHO05D006043 1.7e-139 500.4 499 58.9
Medtr1g034170 Medicago truncatula HOM05D004816 ORTHO05D006043 1.7e-139 500.4 527 56.4
PSO541G0848 Papaver somniferum HOM05D004816 ORTHO05D006043 3.8e-139 499.2 524 59.7
MBI16_g31473_MAGBIO Magnolia biondii HOM05D004816 ORTHO05D006043 6.4e-139 498.4 530 55.5
TWI31G1354 Tripterygium wilfordii HOM05D004816 ORTHO05D006043 1.4e-138 497.3 545 57.6
Haze_02469 Corylus avellana HOM05D004816 ORTHO05D006043 2.4e-138 496.5 621 51.7
TAR625G0829 Trochodendron aralioides HOM05D004816 ORTHO05D006043 4.2e-138 495.7 507 58.6
Rhsim05G0079600 Rhododendron simsii HOM05D004816 ORTHO05D006043 7.1e-138 495.0 508 61.0
Nitab4.5_0009440g0020 Nicotiana tabacum HOM05D004816 ORTHO05D006043 6.0e-137 491.9 529 54.3
VMungo1215G1045 Vigna mungo HOM05D004816 ORTHO05D006043 1.3e-136 490.7 525 59.4
TPR.G18619 Trifolium pratense HOM05D004816 ORTHO05D006043 3.0e-136 489.6 472 59.5
FvH4_2g07090 Fragaria vesca HOM05D004816 ORTHO05D006043 5.6e-135 485.3 424 63.9
SGA_v2.0_scaffold58G20600 Striga asiatica HOM05D004816 ORTHO05D006043 4.8e-134 482.3 512 54.9
Glyma.07G180000 Glycine max HOM05D004816 ORTHO05D006043 1.8e-133 480.3 526 58.9
ClCG02G005580 Citrullus lanatus HOM05D004816 ORTHO05D006043 2.6e-132 476.5 539 56.0
MSTRG.20129 Avicennia marina HOM05D004816 ORTHO05D006043 7.6e-132 474.9 531 53.1
PGSC0003DMG400006219 Solanum tuberosum HOM05D004816 ORTHO05D006043 1.7e-131 473.8 496 54.2
Sopen01g051090 Solanum pennellii HOM05D004816 ORTHO05D006043 2.9e-131 473.0 533 53.7
Nitab4.5_0001401g0100 Nicotiana tabacum HOM05D004816 ORTHO05D006043 4.9e-131 472.2 419 62.1
Nitab4.5_0013034g0040 Nicotiana tabacum HOM05D004816 ORTHO05D006043 4.9e-131 472.2 477 60.0
MELO3C018421.2 Cucumis melo HOM05D004816 ORTHO05D006043 6.4e-131 471.9 537 53.1
PGSC0003DMG402025925 Solanum tuberosum HOM05D004816 ORTHO05D006043 1.1e-130 471.1 533 53.1
Actinidia17843 Actinidia chinensis HOM05D004816 ORTHO05D006043 1.9e-130 470.3 485 56.7
Solyc01g108890.3 Solanum lycopersicum HOM05D004816 ORTHO05D006043 1.9e-130 470.3 533 53.1
Peaxi162Scf00003g02043 Petunia axillaris HOM05D004816 ORTHO05D006043 7.1e-130 468.4 526 52.3
Migut.B00299 Erythranthe guttata HOM05D004816 ORTHO05D006043 9.3e-130 468.0 535 57.4
DCAR_022069 Daucus carota HOM05D004816 ORTHO05D006043 1.2e-129 467.6 455 59.3
SalBow6G5269 Salvia bowleyana HOM05D004816 ORTHO05D006043 3.5e-129 466.1 523 55.8
Sed0008645 Sechium edule HOM05D004816 ORTHO05D006043 4.6e-129 465.7 482 56.6
HanXRQChr10g0303411 Helianthus annuus HOM05D004816 ORTHO05D006043 3.0e-128 463.0 517 56.3
vmacro19471 Vaccinium macrocarpon HOM05D004816 ORTHO05D006043 8.7e-128 461.5 501 59.7
CsaV3_7G010070 Cucumis sativus L. HOM05D004816 ORTHO05D006043 1.9e-127 460.3 542 51.7
FAN15G1865 Fragaria x ananassa HOM05D004816 ORTHO05D006043 3.3e-127 459.5 421 61.3
Hund06195 Selenicereus undatus HOM05D004816 ORTHO05D006043 5.6e-127 458.8 419 60.4
Cc02_g18320 Coffea canephora HOM05D004816 ORTHO05D006043 1.6e-126 457.2 393 63.1
FAN27G2465 Fragaria x ananassa HOM05D004816 ORTHO05D006043 2.8e-126 456.4 421 60.8
PGR142G0866 Punica granatum HOM05D004816 ORTHO05D006043 2.8e-126 456.4 428 60.0
Actinidia27933 Actinidia chinensis HOM05D004816 ORTHO05D006043 1.2e-124 451.1 427 59.5
AUR62016646 Chenopodium quinoa HOM05D004816 ORTHO05D006043 3.4e-124 449.5 526 53.0
AUR62011413 Chenopodium quinoa HOM05D004816 ORTHO05D006043 2.9e-123 446.4 482 55.4
MSTRG.16772 Avicennia marina HOM05D004816 ORTHO05D006043 3.8e-123 446.0 525 52.8
CAN.G322.72 Capsicum annuum HOM05D004816 ORTHO05D006043 8.4e-123 444.9 387 61.5
ECA234G4099 Erigeron canadensis HOM05D004816 ORTHO05D006043 1.6e-121 440.7 411 59.1
Lsat_1_v5_gn_5_117600 Lactuca sativa HOM05D004816 ORTHO05D006043 2.7e-121 439.9 514 51.2
EL10Ac9g21805 Beta vulgaris HOM05D004816 ORTHO05D006043 1.8e-120 437.2 521 54.9
Lj2g0017153 Lotus japonicus HOM05D004816 ORTHO05D001172 1.5e-119 434.1 365 66.0
ATR0733G051 Amborella trichopoda HOM05D004816 ORTHO05D006043 5.6e-119 432.2 420 57.9
Os03g0737900 Oryza sativa ssp. japonica HOM05D004816 ORTHO05D006043 6.2e-118 428.7 490 52.7
HPP92_019907 Vanilla planifolia HOM05D004816 ORTHO05D006043 9.0e-117 424.9 485 51.8
Haze_02467 Corylus avellana HOM05D004816 ORTHO05D006043 1.7e-115 420.6 419 57.3
FAN24G2332 Fragaria x ananassa HOM05D004816 ORTHO05D006043 1.1e-114 417.9 330 67.9
Zm00001eb056520 Zea mays HOM05D004816 ORTHO05D006043 4.6e-113 412.5 421 54.4
Cpa.g.sc62.70 Carica papaya HOM05D004816 ORTHO05D006043 1.1e-106 391.3 381 59.3
TAR381G0713 Trochodendron aralioides HOM05D004816 ORTHO05D006043 1.2e-105 387.9 380 60.3
Prupe.8G114000 Prunus persica HOM05D004816 ORTHO05D006043 2.1e-105 387.1 488 55.3
QL06p000730 Quercus lobata HOM05D004816 ORTHO05D006043 1.1e-101 374.8 401 58.4
CDE06G1012 Ceratophyllum demersum HOM05D004816 ORTHO05D006043 1.4e-98 364.4 382 53.1
Mapoly0087s0083 Marchantia polymorpha HOM05D004816 ORTHO05D006043 7.4e-95 352.1 537 41.7
unitig_21.g20758 Utricularia gibba HOM05D004816 ORTHO05D006043 9.7e-95 351.7 527 44.4
CDE04G3783 Ceratophyllum demersum HOM05D004816 ORTHO05D006043 2.2e-86 323.9 337 52.2
Pp3c4_2830 Physcomitrium patens HOM05D004816 ORTHO05D006043 8.2e-86 322.0 498 39.2
SMO347G0163 Selaginella moellendorffii HOM05D004816 ORTHO05D006043 5.9e-84 315.8 489 39.1
QL08p015136 Quercus lobata HOM05D004816 ORTHO05D000106 8.5e-83 312.0 276 61.6
QL08p015067 Quercus lobata HOM05D004816 ORTHO05D000106 2.5e-82 310.5 276 61.2
SEGI_09196 Sequoiadendron giganteum HOM05D004816 ORTHO05D006043 1.0e-75 288.5 279 55.6
Sc08g0000210 Simmondsia chinensis HOM05D004816 ORTHO05D006043 2.1e-73 280.8 236 63.1
RcHm_v2.0_Chr6g0259581 Rosa chinensis HOM05D004816 ORTHO05D006043 7.5e-71 272.3 323 55.7
AagrBONN_evm.TU.Sc2ySwM_228.2260 Anthoceros agrestis HOM05D004816 ORTHO05D006043 9.8e-71 271.9 510 38.4
Nitab4.5_0005466g0040 Nicotiana tabacum HOM05D004816 ORTHO05D006043 1.7e-70 271.2 369 47.7
CSS0007305 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 4.8e-70 269.6 373 48.8
SHI18146 Sapria himalayana HOM05D004816 ORTHO05D006043 3.1e-69 266.9 612 34.6
Oeu021929.4 Olea europaea HOM05D004816 ORTHO05D006043 8.0e-65 252.3 305 47.9
RcHm_v2.0_Chr6g0259571 Rosa chinensis HOM05D004816 ORTHO05D006043 2.0e-55 221.1 180 65.0
CSS0019035 Camellia sinensis var. sinensis HOM05D004816 ORTHO05D006043 1.9e-50 204.5 338 44.1
Manes.15G144501 Manihot esculenta HOM05D004816 ORTHO05D006043 3.3e-42 177.2 194 67.5
Dinv42115 Davidia involucrata HOM05D004816 ORTHO05D000337 9.5e-42 175.6 475 33.5
Cpa.g.sc62.69 Carica papaya HOM05D004816 ORTHO05D006043 3.6e-41 173.7 145 63.4
Nitab4.5_0000876g0230 Nicotiana tabacum HOM05D000224 ORTHO05D000337 2.9e-38 164.1 162 55.6
Sc08g0000220 Simmondsia chinensis HOM05D004816 ORTHO05D006043 6.0e-36 156.4 160 56.2
Lsat_1_v5_gn_4_68061 Lactuca sativa HOM05D004816 ORTHO05D006043 1.1e-26 125.6 92 69.6
TWI79G0508 Tripterygium wilfordii HOM05D004816 ORTHO05D006043 2.4e-24 117.9 109 54.1
Atru.chr13.510 Acer truncatum HOM05D004816 ORTHO05D006043 7.1e-21 106.3 110 56.4
Atru.chr8.2607 Acer truncatum HOM05D004816 ORTHO05D006043 7.1e-21 106.3 110 56.4
Oeu057669.2 Olea europaea HOM05D004816 ORTHO05D006043 7.1e-21 106.3 203 54.2
Gohir.A01G005566 Gossypium hirsutum HOM05D004816 ORTHO05D006043 7.8e-20 102.8 129 45.0
Atru.chr8.2606 Acer truncatum HOM05D004816 ORTHO05D006043 4.0e-16 90.5 57 75.4
Lsat_1_v5_gn_4_111080 Lactuca sativa HOM05D004816 ORTHO05D006043 9.0e-16 89.4 86 57.0
DCAR_015855 Daucus carota HOM05D004816 ORTHO05D006043 9.9e-15 85.9 90 54.4
CSS0032400 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 1.9e-13 81.6 149 38.3
SEGI_20581 Sequoiadendron giganteum HOM05D004816 ORTHO05D006043 3.2e-13 80.9 138 42.8
Psat0s2233g0240 Pisum sativum HOM05D004816 ORTHO05D006043 4.6e-12 77.0 109 44.0
arahy.Tifrunner.gnm1.ann1.MV8GC5 Arachis hypogaea HOM05D004816 ORTHO05D006043 1.0e-11 75.9 85 56.5
Duzib052G0890 Durio zibethinus HOM05D004816 ORTHO05D006043 8.7e-11 72.8 73 57.5
Actinidia00469 Actinidia chinensis HOM05D004816 ORTHO05D006043 1.5e-10 72.0 78 52.6
CSS0049387 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 2.4e-08 64.7 140 35.0
CSS0045496 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 4.0e-08 63.9 148 35.8
arahy.Tifrunner.gnm1.ann1.JF64TB Arachis hypogaea HOM05D004816 ORTHO05D006043 1.5e-07 62.0 154 37.7
CSS0009254 Camellia sinensis var. sinensis HOM05D001016 ORTHO05D016153 5.8e-07 60.1 143 33.6


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