Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p45540 Brassica napus HOM05D011508 ORTHO05D017548 6.3e-41 170.2 81 100.0
BraA03t13686Z Brassica rapa HOM05D011508 ORTHO05D017548 2.0e-39 165.2 81 95.1
C03p56540 Brassica napus HOM05D011508 ORTHO05D017548 1.9e-37 158.7 81 90.1
BolC3t17940H Brassica oleracea HOM05D011508 ORTHO05D017548 1.9e-37 158.7 81 90.1
BcaB08g34606 Brassica carinata HOM05D011508 ORTHO05D017548 9.5e-29 129.8 81 75.3
C03p56480 Brassica napus HOM05D011508 ORTHO05D020194 2.2e-25 118.6 74 74.3
C03p56450 Brassica napus HOM05D011508 ORTHO05D020194 3.7e-25 117.9 74 73.0
A03p45500 Brassica napus HOM05D011508 ORTHO05D020194 4.1e-24 114.4 74 70.3
BcaB08g34605 Brassica carinata HOM05D011508 ORTHO05D017548 4.6e-23 110.9 65 76.9
C03p56520 Brassica napus HOM05D011508 ORTHO05D020194 9.5e-21 103.2 74 68.9
BolC3t17938H Brassica oleracea HOM05D011508 ORTHO05D020194 9.5e-21 103.2 74 68.9
BcaB08g34604 Brassica carinata HOM05D011508 ORTHO05D017548 2.1e-20 102.1 65 69.2
A03p45530 Brassica napus HOM05D011508 ORTHO05D020194 4.7e-20 100.9 74 66.2
BraA03t13685Z Brassica rapa HOM05D011508 ORTHO05D020194 4.7e-20 100.9 74 66.2
BcaC01g03063 Brassica carinata HOM05D011508 ORTHO05D017548 2.0e-18 95.5 55 72.7
Sp7g27860 Schrenkiella parvula HOM05D008274 ORTHO05D024519 1.5e-10 69.3 70 50.0
AT4G30064 Arabidopsis thaliana HOM05D008274 ORTHO05D010930 8.3e-09 63.5 76 43.4
AL3G47880 Arabidopsis lyrata HOM05D008274 ORTHO05D010930 1.4e-08 62.8 79 44.3
A09p12750 Brassica napus HOM05D008274 ORTHO05D010930 4.1e-08 61.2 79 44.3
AL7G22160 Arabidopsis lyrata HOM05D008274 ORTHO05D010930 5.4e-08 60.8 71 43.7
Carub.0004s1003 Capsella rubella HOM05D008274 ORTHO05D010930 5.4e-08 60.8 71 45.1
Carub.0003s3453 Capsella rubella HOM05D008274 ORTHO05D010930 7.1e-08 60.5 83 44.6
Sp3g33440 Schrenkiella parvula HOM05D008274 ORTHO05D010930 1.6e-07 59.3 76 42.1
BraA09t36919Z Brassica rapa HOM05D008274 ORTHO05D010930 2.1e-07 58.9 79 43.0
Carub.0002s1313 Capsella rubella HOM05D011508 ORTHO05D017548 2.1e-07 58.9 73 43.8
AT2G29045 Arabidopsis thaliana HOM05D008274 ORTHO05D010930 4.6e-07 57.8 75 38.7
Thhalv10002176m.g Eutrema salsugineum HOM05D008274 ORTHO05D010930 4.6e-07 57.8 73 42.5
AT2G20208 Arabidopsis thaliana HOM05D008274 ORTHO05D010930 6.0e-07 57.4 79 40.5
AT4G30067 Arabidopsis thaliana HOM05D008274 ORTHO05D010930 2.3e-06 55.5 72 43.1
Thhalv10027526m.g Eutrema salsugineum HOM05D008274 ORTHO05D010930 3.0e-06 55.1 75 41.3
C07p40790 Brassica napus HOM05D008274 ORTHO05D020184 8.6e-06 53.5 64 40.6
Thhalv10026709m.g Eutrema salsugineum HOM05D008274 ORTHO05D010930 8.6e-06 53.5 72 45.8


User provided reference genes

Program Settings