Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p45530 Brassica napus HOM05D011508 ORTHO05D020194 1.8e-36 155.2 70 100.0
BraA03t13685Z Brassica rapa HOM05D011508 ORTHO05D020194 5.3e-36 153.7 70 98.6
C03p56520 Brassica napus HOM05D011508 ORTHO05D020194 3.4e-35 151.0 70 95.7
BolC3t17938H Brassica oleracea HOM05D011508 ORTHO05D020194 3.4e-35 151.0 70 95.7
C03p56480 Brassica napus HOM05D011508 ORTHO05D020194 2.9e-26 121.3 74 75.7
A03p45500 Brassica napus HOM05D011508 ORTHO05D020194 1.9e-25 118.6 74 73.0
C03p56450 Brassica napus HOM05D011508 ORTHO05D020194 2.5e-25 118.2 74 75.7
C03p56540 Brassica napus HOM05D011508 ORTHO05D017548 9.4e-25 116.3 74 70.3
BolC3t17940H Brassica oleracea HOM05D011508 ORTHO05D017548 9.4e-25 116.3 74 70.3
BraA03t13686Z Brassica rapa HOM05D011508 ORTHO05D017548 2.0e-22 108.6 81 63.0
A03p45540 Brassica napus HOM05D011508 ORTHO05D017548 9.7e-22 106.3 74 66.2
BcaB08g34604 Brassica carinata HOM05D011508 ORTHO05D017548 3.4e-19 97.8 58 72.4
BcaB08g34605 Brassica carinata HOM05D011508 ORTHO05D017548 2.9e-18 94.7 58 69.0
BcaB08g34606 Brassica carinata HOM05D011508 ORTHO05D017548 1.2e-16 89.4 81 55.6
BcaC01g03063 Brassica carinata HOM05D011508 ORTHO05D017548 1.2e-16 89.4 55 69.1
Thhalv10002176m.g Eutrema salsugineum HOM05D008274 ORTHO05D010930 3.5e-11 71.2 75 45.3
A09p12750 Brassica napus HOM05D008274 ORTHO05D010930 5.9e-11 70.5 75 50.7
BraA09t36919Z Brassica rapa HOM05D008274 ORTHO05D010930 2.9e-10 68.2 75 49.3
AL3G47880 Arabidopsis lyrata HOM05D008274 ORTHO05D010930 5.0e-10 67.4 76 47.4
Carub.0003s3453 Capsella rubella HOM05D008274 ORTHO05D010930 5.0e-10 67.4 78 47.4
Sp7g27860 Schrenkiella parvula HOM05D008274 ORTHO05D024519 1.1e-09 66.2 70 51.4
AT4G30067 Arabidopsis thaliana HOM05D008274 ORTHO05D010930 1.9e-09 65.5 72 47.2
Sp3g33440 Schrenkiella parvula HOM05D008274 ORTHO05D010930 2.5e-09 65.1 74 48.6
AT4G30064 Arabidopsis thaliana HOM05D008274 ORTHO05D010930 4.2e-09 64.3 71 49.3
Thhalv10027526m.g Eutrema salsugineum HOM05D008274 ORTHO05D010930 4.2e-09 64.3 71 49.3
AL7G22160 Arabidopsis lyrata HOM05D008274 ORTHO05D010930 5.5e-09 63.9 71 47.9
AT2G29045 Arabidopsis thaliana HOM05D008274 ORTHO05D010930 7.2e-09 63.5 71 46.5
Carub.0004s1003 Capsella rubella HOM05D008274 ORTHO05D010930 7.2e-09 63.5 71 47.9
A02p01370 Brassica napus HOM05D008274 ORTHO05D024519 6.1e-08 60.5 67 46.3
BraA02t05116Z Brassica rapa HOM05D008274 ORTHO05D024519 6.1e-08 60.5 67 46.3
Thhalv10027161m.g Eutrema salsugineum HOM05D008274 ORTHO05D010930 8.0e-08 60.1 70 50.0
AT2G20208 Arabidopsis thaliana HOM05D008274 ORTHO05D010930 3.0e-07 58.2 76 42.1
Sp7g27910 Schrenkiella parvula HOM05D008274 ORTHO05D033960 3.0e-07 58.2 72 44.4
BraA01t00752Z Brassica rapa HOM05D008274 ORTHO05D010930 4.0e-07 57.8 71 43.7
A01p08070 Brassica napus HOM05D008274 ORTHO05D010930 5.2e-07 57.4 71 42.3
Thhalv10028327m.g Eutrema salsugineum HOM05D008274 ORTHO05D010930 6.7e-07 57.0 72 43.1
A08p30050 Brassica napus HOM05D008274 ORTHO05D028205 8.8e-07 56.6 81 45.7
C02p05610 Brassica napus HOM05D008274 ORTHO05D024519 8.8e-07 56.6 67 44.8
C07p40820 Brassica napus HOM05D008274 ORTHO05D020184 8.8e-07 56.6 70 41.4
C08p19140 Brassica napus HOM05D008274 ORTHO05D028205 8.8e-07 56.6 81 45.7
BolC2t06505H Brassica oleracea HOM05D008274 ORTHO05D024519 8.8e-07 56.6 67 44.8
BraA08t34940Z Brassica rapa HOM05D008274 ORTHO05D028205 8.8e-07 56.6 81 45.7
A06p37540 Brassica napus HOM05D008274 ORTHO05D020184 1.2e-06 56.2 70 41.4
BraA06t26676Z Brassica rapa HOM05D008274 ORTHO05D020184 1.2e-06 56.2 70 41.4
A02p26220 Brassica napus HOM05D008274 ORTHO05D020184 1.5e-06 55.8 64 43.8
C02p20550 Brassica napus HOM05D008274 ORTHO05D010930 1.5e-06 55.8 70 42.9
BolC2t08191H Brassica oleracea HOM05D008274 ORTHO05D010930 1.5e-06 55.8 70 42.9
BraA02t07623Z Brassica rapa HOM05D008274 ORTHO05D020184 1.5e-06 55.8 64 43.8
CARHR164790 Cardamine hirsuta HOM05D008274 ORTHO05D010930 1.5e-06 55.8 70 47.1
C08p19110 Brassica napus HOM05D008274 ORTHO05D028205 2.6e-06 55.1 81 44.4
Carub.0007s1056 Capsella rubella HOM05D008274 ORTHO05D010930 3.3e-06 54.7 71 40.8
A02p12430 Brassica napus HOM05D008274 ORTHO05D010930 5.7e-06 53.9 70 41.4
BraA02t06307Z Brassica rapa HOM05D008274 ORTHO05D010930 5.7e-06 53.9 70 41.4
AT1G73603 Arabidopsis thaliana HOM05D029201 ORTHO05D026819 7.5e-06 53.5 66 47.0
BcaB05g24016 Brassica carinata HOM05D008274 ORTHO05D010930 7.5e-06 53.5 70 41.4


User provided reference genes

Program Settings