Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p45510 Brassica napus HOM05D014923 ORTHO05D018556 4.9e-28 127.1 64 100.0
A02p25380 Brassica napus HOM05D014923 ORTHO05D018556 4.3e-16 87.4 64 75.0
BraA02t07525Z Brassica rapa HOM05D014923 ORTHO05D018556 7.3e-16 86.7 64 75.0
BolC2t10056H Brassica oleracea HOM05D014923 ORTHO05D018556 1.6e-15 85.5 64 71.9
BcaC02g11709 Brassica carinata HOM05D014923 ORTHO05D018556 4.7e-15 84.0 64 73.4
C04p12110 Brassica napus HOM05D014923 ORTHO05D018556 4.7e-15 84.0 64 73.4
BcaC04g19475 Brassica carinata HOM05D014923 ORTHO05D018556 1.8e-14 82.0 64 73.4
BcaC01g03062 Brassica carinata HOM05D014923 ORTHO05D039909 5.2e-14 80.5 58 74.1
C03p56490 Brassica napus HOM05D014923 ORTHO05D039909 5.2e-14 80.5 58 74.1
C02p40280 Brassica napus HOM05D014923 ORTHO05D018556 5.8e-13 77.0 64 68.8
BcaNung00216 Brassica carinata HOM05D001624 ORTHO05D001530 9.8e-13 76.3 70 67.1
BolC7t45296H Brassica oleracea HOM05D001624 ORTHO05D001530 4.9e-12 73.9 61 73.8
Thhalv10026169m.g Eutrema salsugineum HOM05D001624 ORTHO05D001530 4.9e-12 73.9 72 61.1
CARHR222540 Cardamine hirsuta HOM05D001624 ORTHO05D001530 1.4e-11 72.4 62 71.0
BolC8t48345H Brassica oleracea HOM05D001624 ORTHO05D001530 7.0e-11 70.1 55 70.9
Sp7g14680 Schrenkiella parvula HOM05D001624 ORTHO05D001530 7.0e-11 70.1 73 58.9
BcaB04g18369 Brassica carinata HOM05D001624 ORTHO05D001530 1.2e-10 69.3 57 64.9
BcaC07g37963 Brassica carinata HOM05D001624 ORTHO05D001530 3.5e-10 67.8 55 69.1
A08p12360 Brassica napus HOM05D001624 ORTHO05D001530 3.5e-10 67.8 55 69.1
AL7G38940 Arabidopsis lyrata HOM05D001624 ORTHO05D001530 1.3e-09 65.9 64 60.9
BraA08t33219Z Brassica rapa HOM05D001624 ORTHO05D001530 1.3e-09 65.9 55 67.3
BcaC06g32993 Brassica carinata HOM05D001624 ORTHO05D001530 4.3e-08 60.8 61 60.7
C01p26730 Brassica napus HOM05D001624 ORTHO05D001530 9.5e-08 59.7 62 61.3
Aa31LG10G5950 Aethionema arabicum HOM05D001624 ORTHO05D001530 2.8e-07 58.2 54 63.0
Carub.0007s2538 Capsella rubella HOM05D001624 ORTHO05D001530 1.1e-06 56.2 69 55.1
BcaC09g50316 Brassica carinata HOM05D001624 ORTHO05D001530 1.8e-06 55.5 62 58.1
A01p21390 Brassica napus HOM05D001624 ORTHO05D001530 1.8e-06 55.5 72 52.8
BolC1t02614H Brassica oleracea HOM05D001624 ORTHO05D001530 1.8e-06 55.5 62 58.1
BraA01t02044Z Brassica rapa HOM05D001624 ORTHO05D001530 1.8e-06 55.5 72 52.8


User provided reference genes

Program Settings