Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p45360 Brassica napus HOM05D003477 ORTHO05D004043 1.4e-48 196.1 102 100.0
BraA03t13668Z Brassica rapa HOM05D003477 ORTHO05D004043 1.4e-48 196.1 102 100.0
BcaC01g03075 Brassica carinata HOM05D003477 ORTHO05D004043 2.1e-41 172.2 102 90.2
C03p56260 Brassica napus HOM05D003477 ORTHO05D004043 2.1e-41 172.2 102 90.2
BolC3t17914H Brassica oleracea HOM05D003477 ORTHO05D004043 2.1e-41 172.2 102 90.2
CARHR105430 Cardamine hirsuta HOM05D003477 ORTHO05D004043 2.1e-41 172.2 102 88.2
Thhalv10022939m.g Eutrema salsugineum HOM05D003477 ORTHO05D004043 1.4e-37 159.5 94 91.5
BcaC01g03076 Brassica carinata HOM05D003477 ORTHO05D004043 6.5e-35 150.6 80 95.0
Carub.0003s2895 Capsella rubella HOM05D003477 ORTHO05D004043 2.1e-33 145.6 93 84.9
Sp3g28420 Schrenkiella parvula HOM05D003477 ORTHO05D004043 2.1e-33 145.6 102 77.5
AL3G46800 Arabidopsis lyrata HOM05D003477 ORTHO05D004043 3.0e-32 141.7 102 75.5
AT2G15000 Arabidopsis thaliana HOM05D003477 ORTHO05D004043 8.8e-32 140.2 102 74.5
BcaB08g34577 Brassica carinata HOM05D003477 ORTHO05D004043 8.3e-30 133.7 93 78.5
Aa31LG8G13000 Aethionema arabicum HOM05D003477 ORTHO05D004043 1.8e-29 132.5 102 70.6
Aa31LG2G16840 Aethionema arabicum HOM05D003477 ORTHO05D004043 2.0e-28 129.0 102 69.6
BcaC06g36034 Brassica carinata HOM05D003477 ORTHO05D004043 3.5e-28 128.3 102 70.6
Carub.0007s0610 Capsella rubella HOM05D003477 ORTHO05D004043 1.0e-24 116.7 92 71.7
C01p04520 Brassica napus HOM05D003477 ORTHO05D004043 2.3e-24 115.5 102 63.7
BolC1t00438H Brassica oleracea HOM05D003477 ORTHO05D004043 5.2e-24 114.4 102 62.7
Duzib052G0507 Durio zibethinus HOM05D003477 ORTHO05D004043 1.2e-23 113.2 105 66.7
A07p05410 Brassica napus HOM05D003477 ORTHO05D004043 1.5e-23 112.8 95 68.4
A01p04150 Brassica napus HOM05D003477 ORTHO05D004043 2.0e-23 112.5 102 61.8
BraA01t00404Z Brassica rapa HOM05D003477 ORTHO05D004043 2.0e-23 112.5 102 61.8
C07p08710 Brassica napus HOM05D003477 ORTHO05D004043 2.6e-23 112.1 91 70.3
BolC7t41282H Brassica oleracea HOM05D003477 ORTHO05D004043 2.6e-23 112.1 91 70.3
BraA07t28337Z Brassica rapa HOM05D003477 ORTHO05D004043 2.6e-23 112.1 91 70.3
Gorai.005G234400 Gossypium raimondii HOM05D003477 ORTHO05D004043 4.4e-23 111.3 104 65.4
Duzib248G0529 Durio zibethinus HOM05D003477 ORTHO05D004043 2.4e-21 105.5 105 64.8
Gorai.008G021900 Gossypium raimondii HOM05D003477 ORTHO05D004043 2.4e-21 105.5 105 61.9
AT4G34265 Arabidopsis thaliana HOM05D003477 ORTHO05D004043 4.1e-21 104.8 93 64.5
vmacro19455 Vaccinium macrocarpon HOM05D003477 ORTHO05D004043 2.0e-20 102.4 102 61.8
BcaNung04163 Brassica carinata HOM05D003477 ORTHO05D004043 2.7e-20 102.1 102 55.9
CiPaw.05G013300 Carya illinoinensis HOM05D003477 ORTHO05D004043 2.7e-20 102.1 106 60.4
QL11p032673 Quercus lobata HOM05D003477 ORTHO05D004043 3.5e-20 101.7 101 61.4
Sed0009886 Sechium edule HOM05D003477 ORTHO05D004043 7.8e-20 100.5 104 58.7
SGA_v2.0_scaffold32G13034 Striga asiatica HOM05D003477 ORTHO05D004043 2.3e-19 99.0 104 59.6
Cpa.g.sc106.115 Carica papaya HOM05D003477 ORTHO05D004043 5.0e-19 97.8 92 60.9
PGSC0003DMG400025859 Solanum tuberosum HOM05D003477 ORTHO05D004043 8.6e-19 97.1 105 57.1
ClCG02G006540 Citrullus lanatus HOM05D003477 ORTHO05D004043 1.1e-18 96.7 104 57.7
DCAR_029094 Daucus carota HOM05D003477 ORTHO05D004043 1.1e-18 96.7 102 57.8
Lj5g0009419 Lotus japonicus HOM05D003477 ORTHO05D004043 1.1e-18 96.7 102 56.9
ClCG05G010360 Citrullus lanatus HOM05D003477 ORTHO05D004043 1.9e-18 95.9 106 56.6
Prupe.8G137400 Prunus persica HOM05D003477 ORTHO05D004043 1.9e-18 95.9 102 60.8
TWI31G0442 Tripterygium wilfordii HOM05D003477 ORTHO05D004043 1.9e-18 95.9 105 58.1
AL7G17010 Arabidopsis lyrata HOM05D003477 ORTHO05D004043 3.3e-18 95.1 92 60.9
MELO3C018498.2 Cucumis melo HOM05D003477 ORTHO05D004043 3.3e-18 95.1 105 58.1
CANSAT25G3186 Cannabis sativa HOM05D003477 ORTHO05D004043 4.3e-18 94.7 102 58.8
Gohir.D02G206836 Gossypium hirsutum HOM05D003477 ORTHO05D004043 5.6e-18 94.4 95 63.2
Duzib132G0501 Durio zibethinus HOM05D003477 ORTHO05D004043 1.2e-17 93.2 95 64.2
SGA_v2.0_scaffold225G42992 Striga asiatica HOM05D003477 ORTHO05D004043 2.1e-17 92.4 108 60.2
Thecc.02G111100 Theobroma cacao HOM05D003477 ORTHO05D004043 2.1e-17 92.4 95 62.1
TAR625G0309 Trochodendron aralioides HOM05D003477 ORTHO05D004043 2.1e-17 92.4 105 59.0
Gohir.A03G185500 Gossypium hirsutum HOM05D003477 ORTHO05D004043 2.8e-17 92.0 95 62.1
VMungo0720G2427 Vigna mungo HOM05D003477 ORTHO05D004043 3.6e-17 91.7 105 56.2
Atru.chr5.2447 Acer truncatum HOM05D003477 ORTHO05D004043 4.7e-17 91.3 102 57.8
Actinidia00402 Actinidia chinensis HOM05D003477 ORTHO05D004043 4.7e-17 91.3 105 59.0
Migut.B00399 Erythranthe guttata HOM05D003477 ORTHO05D004043 4.7e-17 91.3 104 57.7
CAN.G606.19 Capsicum annuum HOM05D003477 ORTHO05D004043 6.1e-17 90.9 100 57.0
CARHR242520 Cardamine hirsuta HOM05D003477 ORTHO05D004043 6.1e-17 90.9 92 58.7
Gohir.D12G021600 Gossypium hirsutum HOM05D003477 ORTHO05D004043 1.4e-16 89.7 95 60.0
TAR376G0403 Trochodendron aralioides HOM05D003477 ORTHO05D004043 1.4e-16 89.7 102 58.8
arahy.Tifrunner.gnm1.ann1.K085P0 Arachis hypogaea HOM05D003477 ORTHO05D004043 2.3e-16 89.0 105 57.1
vmacro01991 Vaccinium macrocarpon HOM05D003477 ORTHO05D004043 2.3e-16 89.0 105 57.1
Dinv15774 Davidia involucrata HOM05D003477 ORTHO05D004043 3.0e-16 88.6 105 56.2
Thhalv10026653m.g Eutrema salsugineum HOM05D003477 ORTHO05D004043 3.0e-16 88.6 93 54.8
FAN27G0803 Fragaria x ananassa HOM05D003477 ORTHO05D004043 4.0e-16 88.2 102 58.8
Manes.07G066700 Manihot esculenta HOM05D003477 ORTHO05D004043 4.0e-16 88.2 96 57.3
Potri.001G298800 Populus trichocarpa HOM05D003477 ORTHO05D004043 5.2e-16 87.8 96 60.4
DCAR_001659 Daucus carota HOM05D003477 ORTHO05D004043 6.8e-16 87.4 102 52.9
Manes.10G075200 Manihot esculenta HOM05D003477 ORTHO05D004043 8.9e-16 87.0 96 56.2
Sabra16G0187400 Salix brachista HOM05D003477 ORTHO05D004043 1.2e-15 86.7 105 56.2
Aqoxy6G02834 Aquilegia oxysepala HOM05D003477 ORTHO05D004043 1.5e-15 86.3 109 55.0
Gohir.A12G021300 Gossypium hirsutum HOM05D003477 ORTHO05D004043 1.5e-15 86.3 95 58.9
arahy.Tifrunner.gnm1.ann1.S3TCSS Arachis hypogaea HOM05D003477 ORTHO05D004043 2.0e-15 85.9 105 56.2
FvH4_2g04800 Fragaria vesca HOM05D003477 ORTHO05D004043 2.0e-15 85.9 102 58.8
Oeu013760.1 Olea europaea HOM05D003477 ORTHO05D004043 2.6e-15 85.5 103 54.4
PSO210G4486 Papaver somniferum HOM05D003477 ORTHO05D004043 3.4e-15 85.1 99 56.6
FAN15G1392 Fragaria x ananassa HOM05D003477 ORTHO05D004043 4.4e-15 84.7 100 57.0
Ciclev10029666m.g Citrus clementina HOM05D003477 ORTHO05D004043 5.8e-15 84.3 104 54.8
SalBow3G1026 Salvia bowleyana HOM05D003477 ORTHO05D004043 5.8e-15 84.3 107 55.1
AUR62003947 Chenopodium quinoa HOM05D003477 ORTHO05D004043 9.8e-15 83.6 106 52.8
AUR62038261 Chenopodium quinoa HOM05D003477 ORTHO05D004043 9.8e-15 83.6 106 52.8
FAN24G0602 Fragaria x ananassa HOM05D003477 ORTHO05D004043 1.3e-14 83.2 102 57.8
Hund16371 Selenicereus undatus HOM05D003477 ORTHO05D004043 1.3e-14 83.2 111 53.2
FAN20G0459 Fragaria x ananassa HOM05D003477 ORTHO05D004043 2.2e-14 82.4 102 57.8
Sed0015852 Sechium edule HOM05D003477 ORTHO05D004043 2.9e-14 82.0 93 53.8
TWI79G1417 Tripterygium wilfordii HOM05D003477 ORTHO05D004043 2.9e-14 82.0 95 55.8
MBI04_g11440_MAGBIO Magnolia biondii HOM05D003477 ORTHO05D004043 3.7e-14 81.6 91 57.1
Lsat_1_v5_gn_9_111940 Lactuca sativa HOM05D003477 ORTHO05D004043 4.9e-14 81.3 102 52.0
Sp7g32050 Schrenkiella parvula HOM05D003477 ORTHO05D004043 4.9e-14 81.3 92 52.2
Medtr1g107085 Medicago truncatula HOM05D003477 ORTHO05D004043 6.4e-14 80.9 106 53.8
PSO541G5514 Papaver somniferum HOM05D003477 ORTHO05D004043 6.4e-14 80.9 97 52.6
Sed0021400 Sechium edule HOM05D003477 ORTHO05D004043 6.4e-14 80.9 96 55.2
PSO675G8803 Papaver somniferum HOM05D003477 ORTHO05D004043 8.3e-14 80.5 97 53.6
Rhsim05G0089200 Rhododendron simsii HOM05D003477 ORTHO05D004043 8.3e-14 80.5 91 58.2
Sopen01g049690 Solanum pennellii HOM05D003477 ORTHO05D004043 1.1e-13 80.1 95 54.7
Duzib248G0862 Durio zibethinus HOM05D003477 ORTHO05D004043 1.4e-13 79.7 92 57.6
Nn5g30458 Nelumbo nucifera HOM05D003477 ORTHO05D004043 1.4e-13 79.7 96 56.2
Oeu029533.3 Olea europaea HOM05D003477 ORTHO05D004043 1.4e-13 79.7 88 55.7
Psat6g216680 Pisum sativum HOM05D003477 ORTHO05D004043 1.4e-13 79.7 106 51.9
Sabra09G0072000 Salix brachista HOM05D003477 ORTHO05D004043 2.4e-13 79.0 103 51.5
CsaV3_3G018130 Cucumis sativus L. HOM05D003477 ORTHO05D004043 3.2e-13 78.6 97 57.7
CsaV3_7G008070 Cucumis sativus L. HOM05D010572 ORTHO05D012753 4.1e-13 78.2 100 51.0
Solyc01g107450.4 Solanum lycopersicum HOM05D003477 ORTHO05D004043 5.4e-13 77.8 93 54.8
BcaNung04987 Brassica carinata HOM05D003477 ORTHO05D004043 7.0e-13 77.4 102 51.0
Potri.009G093400 Populus trichocarpa HOM05D003477 ORTHO05D004043 1.6e-12 76.3 96 57.3
SalBow6G1705 Salvia bowleyana HOM05D003477 ORTHO05D004043 2.0e-12 75.9 107 50.5
GSVIVG01037899001 Vitis vinifera HOM05D003477 ORTHO05D004043 3.5e-12 75.1 80 56.2
PSO675G3465 Papaver somniferum HOM05D003477 ORTHO05D004043 4.6e-12 74.7 95 55.8
Dinv42204 Davidia involucrata HOM05D003477 ORTHO05D004043 7.8e-12 73.9 92 54.3
Nn1g04659 Nelumbo nucifera HOM05D003477 ORTHO05D004043 1.3e-11 73.2 95 54.7
Atru.chr3.235 Acer truncatum HOM05D003477 ORTHO05D004043 2.3e-11 72.4 92 51.1
CSS0007946 Camellia sinensis var. sinensis HOM05D003477 ORTHO05D004043 2.3e-11 72.4 95 53.7
CSS0046932 Camellia sinensis var. sinensis HOM05D003477 ORTHO05D004043 2.3e-11 72.4 95 53.7
CDE01G0745 Ceratophyllum demersum HOM05D003477 ORTHO05D004043 3.9e-11 71.6 103 48.5
CDE02G3617 Ceratophyllum demersum HOM05D003477 ORTHO05D004043 3.9e-11 71.6 102 48.0
Haze_10200 Corylus avellana HOM05D003477 ORTHO05D004043 5.0e-11 71.2 96 53.1
Eucgr.H02262 Eucalyptus grandis HOM05D003477 ORTHO05D004043 5.0e-11 71.2 86 47.7
Actinidia34393 Actinidia chinensis HOM05D003477 ORTHO05D004043 8.6e-11 70.5 96 54.2
CSS0020585 Camellia sinensis var. sinensis HOM05D003477 ORTHO05D004043 8.6e-11 70.5 94 50.0
DCAR_025766 Daucus carota HOM05D003477 ORTHO05D004043 1.1e-10 70.1 94 51.1
MD10G1099700 Malus domestica HOM05D003477 ORTHO05D004043 1.1e-10 70.1 92 53.3
Cfa004605 Carpinus fangiana HOM05D003477 ORTHO05D004043 1.5e-10 69.7 85 51.8
Cc07_g06600 Coffea canephora HOM05D003477 ORTHO05D004043 1.5e-10 69.7 110 47.3
arahy.Tifrunner.gnm1.ann1.VE84TY Arachis hypogaea HOM05D003477 ORTHO05D004043 2.5e-10 68.9 94 47.9
Lalb_Chr21g0308261 Lupinus albus HOM05D003477 ORTHO05D004043 2.5e-10 68.9 90 52.2
PSO675G6764 Papaver somniferum HOM05D003477 ORTHO05D004043 3.3e-10 68.6 95 52.6
RcHm_v2.0_Chr6g0254531 Rosa chinensis HOM05D003477 ORTHO05D004043 3.3e-10 68.6 93 57.0
Phvul.007G041500 Phaseolus vulgaris HOM05D003477 ORTHO05D004043 4.3e-10 68.2 95 48.4
Lalb_Chr02g0145231 Lupinus albus HOM05D003477 ORTHO05D004043 5.6e-10 67.8 88 53.4
Rhsim11G0157900 Rhododendron simsii HOM05D003477 ORTHO05D004043 5.6e-10 67.8 95 50.5
TAR381G0852 Trochodendron aralioides HOM05D003477 ORTHO05D004043 5.6e-10 67.8 95 52.6
Rhsim11G0156400 Rhododendron simsii HOM05D003477 ORTHO05D004043 7.3e-10 67.4 95 50.5
Cc02_g19410 Coffea canephora HOM05D003477 ORTHO05D004043 1.2e-09 66.6 95 51.6
Eucgr.I01090 Eucalyptus grandis HOM05D003477 ORTHO05D004043 1.2e-09 66.6 97 46.4
Ca_11060_v3 Cicer arietinum L. HOM05D003477 ORTHO05D004043 1.6e-09 66.2 97 52.6
Dinv26882 Davidia involucrata HOM05D003477 ORTHO05D004043 2.1e-09 65.9 105 46.7
Hma1.2p1_1023F.1_g249010 Hydrangea macrophylla HOM05D003477 ORTHO05D004043 2.1e-09 65.9 95 54.7
arahy.Tifrunner.gnm1.ann1.T63M72 Arachis hypogaea HOM05D003477 ORTHO05D004043 2.8e-09 65.5 89 49.4
Hund06306 Selenicereus undatus HOM05D003477 ORTHO05D004043 3.6e-09 65.1 85 51.8
MELO3C031999.2 Cucumis melo HOM05D003477 ORTHO05D013069 4.7e-09 64.7 50 64.0
Nitab4.5_0003699g0030 Nicotiana tabacum HOM05D003477 ORTHO05D004043 4.7e-09 64.7 95 47.4
EL10Ac6g15680 Beta vulgaris HOM05D003477 ORTHO05D004043 8.0e-09 63.9 97 47.4
Nitab4.5_0001439g0010 Nicotiana tabacum HOM05D003477 ORTHO05D004043 8.0e-09 63.9 53 60.4
RcHm_v2.0_Chr2g0107061 Rosa chinensis HOM05D003477 ORTHO05D004043 8.0e-09 63.9 96 45.8
ECA240G1244 Erigeron canadensis HOM05D003477 ORTHO05D004043 1.8e-08 62.8 92 48.9
HanXRQChr03g0068771 Helianthus annuus HOM05D003477 ORTHO05D004043 1.8e-08 62.8 92 46.7
Sc16g0001450 Simmondsia chinensis HOM05D003477 ORTHO05D004043 1.8e-08 62.8 97 48.5
ATR0315G039 Amborella trichopoda HOM05D003477 ORTHO05D004043 2.3e-08 62.4 105 46.7
QL06p040030 Quercus lobata HOM05D003477 ORTHO05D004043 2.3e-08 62.4 93 41.9
Actinidia16453 Actinidia chinensis HOM05D003477 ORTHO05D004043 4.0e-08 61.6 97 50.5
Actinidia21247 Actinidia chinensis HOM05D003477 ORTHO05D004043 4.0e-08 61.6 97 50.5
ECA238G3264 Erigeron canadensis HOM05D003477 ORTHO05D004043 5.2e-08 61.2 97 49.5
PGSC0003DMG400024979 Solanum tuberosum HOM05D003477 ORTHO05D004043 6.8e-08 60.8 53 56.6
Sed0004332 Sechium edule HOM05D003477 ORTHO05D004043 8.9e-08 60.5 70 52.9
Nitab4.5_0001119g0150 Nicotiana tabacum HOM05D003477 ORTHO05D004043 1.5e-07 59.7 49 61.2
Sopen02g037390 Solanum pennellii HOM05D003477 ORTHO05D004043 2.0e-07 59.3 88 46.6
Glyma.20G130500 Glycine max HOM05D003477 ORTHO05D004043 2.6e-07 58.9 97 50.5
Solyc02g092830.4 Solanum lycopersicum HOM05D003477 ORTHO05D004043 2.6e-07 58.9 87 46.0
Lsat_1_v5_gn_2_85381 Lactuca sativa HOM05D003477 ORTHO05D004043 4.4e-07 58.2 98 44.9
Ciclev10027007m.g Citrus clementina HOM05D003477 ORTHO05D004043 7.5e-07 57.4 100 39.0
Prupe.6G226300 Prunus persica HOM05D003477 ORTHO05D004043 7.5e-07 57.4 95 42.1
FvH4_1g16960 Fragaria vesca HOM05D003477 ORTHO05D004043 9.8e-07 57.0 94 40.4
Actinidia08244 Actinidia chinensis HOM05D003477 ORTHO05D004043 1.3e-06 56.6 87 50.6
Actinidia27974 Actinidia chinensis HOM05D003477 ORTHO05D004043 1.3e-06 56.6 38 68.4
MD02G1179900 Malus domestica HOM05D003477 ORTHO05D004043 1.3e-06 56.6 97 45.4
Peaxi162Scf00152g00313 Petunia axillaris HOM05D003477 ORTHO05D004043 1.3e-06 56.6 85 49.4
Peaxi162Scf00945g00014 Petunia axillaris HOM05D003477 ORTHO05D004043 1.3e-06 56.6 97 43.3
Phvul.002G014500 Phaseolus vulgaris HOM05D003477 ORTHO05D004043 1.3e-06 56.6 100 44.0
FAN13G0097 Fragaria x ananassa HOM05D000502 ORTHO05D000356 2.2e-06 55.8 94 41.5
Sc08g0001310 Simmondsia chinensis HOM05D003477 ORTHO05D004043 2.9e-06 55.5 95 42.1
FAN26G2600 Fragaria x ananassa HOM05D003477 ORTHO05D004043 3.7e-06 55.1 91 45.1
TPR.G19065 Trifolium pratense HOM05D003477 ORTHO05D004043 4.9e-06 54.7 49 61.2
FAN28G0243 Fragaria x ananassa HOM05D003477 ORTHO05D004043 6.4e-06 54.3 100 42.0
Psat2g169360 Pisum sativum HOM05D003477 ORTHO05D004043 6.4e-06 54.3 97 41.2
RcHm_v2.0_Chr7g0203511 Rosa chinensis HOM05D006762 ORTHO05D003505 6.4e-06 54.3 94 41.5
VMungo1215G1682 Vigna mungo HOM05D002634 ORTHO05D003100 8.3e-06 53.9 73 43.8


User provided reference genes

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