Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p44630 Brassica napus HOM05D008158 ORTHO05D010323 1.7e-38 162.9 136 100.0
BraA03t13598Z Brassica rapa HOM05D008158 ORTHO05D010323 8.2e-33 144.1 136 94.1
C03p55460 Brassica napus HOM05D008158 ORTHO05D010323 5.3e-32 141.4 136 87.5
BolC3t17821H Brassica oleracea HOM05D008158 ORTHO05D010323 5.3e-32 141.4 136 87.5
BcaC01g03160 Brassica carinata HOM05D008158 ORTHO05D010323 1.2e-31 140.2 136 72.8
BcaB08g34502 Brassica carinata HOM05D008158 ORTHO05D010323 1.6e-25 119.8 142 83.8
Thhalv10017460m.g Eutrema salsugineum HOM05D008158 ORTHO05D010323 2.4e-24 115.9 138 63.0
Sp3g24030 Schrenkiella parvula HOM05D008158 ORTHO05D010323 1.1e-21 107.1 141 63.1
AL3G42950 Arabidopsis lyrata HOM05D008158 ORTHO05D010323 6.1e-20 101.3 155 70.3
AL3G42960 Arabidopsis lyrata HOM05D008158 ORTHO05D010323 1.4e-19 100.1 138 67.4
Sp3g24050 Schrenkiella parvula HOM05D008158 ORTHO05D010323 3.0e-19 99.0 138 61.6
AL3G42860 Arabidopsis lyrata HOM05D008158 ORTHO05D010323 5.1e-19 98.2 138 67.4
Sp3g24040 Schrenkiella parvula HOM05D008158 ORTHO05D010323 1.5e-18 96.7 135 80.0
CARHR103210 Cardamine hirsuta HOM05D008158 ORTHO05D010323 2.5e-18 95.9 136 45.6
AT2G05380 Arabidopsis thaliana HOM05D008158 ORTHO05D010323 3.3e-18 95.5 139 64.0
AT2G05530 Arabidopsis thaliana HOM05D008158 ORTHO05D010323 3.3e-18 95.5 148 56.1
Carub.0003s2685 Capsella rubella HOM05D008158 ORTHO05D010323 3.3e-18 95.5 146 70.5
AT2G05520 Arabidopsis thaliana HOM05D008158 ORTHO05D010323 7.4e-18 94.4 147 73.5
BraA04t17885Z Brassica rapa HOM05D008158 ORTHO05D010323 2.2e-17 92.8 137 61.3
C04p60060 Brassica napus HOM05D008158 ORTHO05D010323 3.7e-17 92.0 137 70.1
BolC4t27509H Brassica oleracea HOM05D008158 ORTHO05D010323 3.7e-17 92.0 137 70.1
Carub.0003s2686 Capsella rubella HOM05D008158 ORTHO05D010323 6.3e-17 91.3 136 68.4
A04p23590 Brassica napus HOM05D008158 ORTHO05D010323 1.4e-16 90.1 137 60.6
BcaB06g28391 Brassica carinata HOM05D008158 ORTHO05D010323 1.2e-15 87.0 148 53.4
BraA03t13597Z Brassica rapa HOM05D008158 ORTHO05D010323 3.2e-13 79.0 141 72.3
Aa31LG1G19090 Aethionema arabicum HOM05D008158 ORTHO05D010323 1.6e-12 76.6 136 69.1
THA.LOC104826607 Tarenaya hassleriana HOM05D008158 ORTHO05D010323 4.7e-12 75.1 139 63.3
CARHR103220 Cardamine hirsuta HOM05D008158 ORTHO05D010323 1.0e-11 73.9 139 63.3
BraA10t42972Z Brassica rapa HOM05D008158 ORTHO05D010323 5.1e-11 71.6 139 40.3
A10p08930 Brassica napus HOM05D008158 ORTHO05D010323 3.3e-10 68.9 139 39.6
Carub.0003s2679 Capsella rubella HOM05D008158 ORTHO05D010323 3.3e-10 68.9 136 36.0
BolC9t55330H Brassica oleracea HOM05D008158 ORTHO05D010323 4.4e-10 68.6 140 38.6
CARHR103240 Cardamine hirsuta HOM05D008158 ORTHO05D010323 9.7e-10 67.4 137 50.4
C03p55470 Brassica napus HOM05D008158 ORTHO05D010323 2.8e-09 65.9 139 56.8
BcaB08g34503 Brassica carinata HOM05D008158 ORTHO05D010323 4.8e-09 65.1 139 59.0
BcaC01g03159 Brassica carinata HOM05D008158 ORTHO05D010323 6.3e-09 64.7 139 59.0
A03p44640 Brassica napus HOM05D008158 ORTHO05D010323 6.3e-09 64.7 139 59.0
THA.LOC104826606 Tarenaya hassleriana HOM05D008158 ORTHO05D010323 3.1e-08 62.4 148 48.6
Thhalv10003123m.g Eutrema salsugineum HOM05D008158 ORTHO05D010323 5.9e-07 58.2 46 67.4
Thhalv10002728m.g Eutrema salsugineum HOM05D008158 ORTHO05D010323 7.7e-07 57.8 134 55.2
AL3G42930 Arabidopsis lyrata HOM05D008158 ORTHO05D010323 1.0e-06 57.4 46 67.4
EL10Ac9g22778 Beta vulgaris HOM05D008132 ORTHO05D005763 1.7e-06 56.6 27 81.5
BcaC04g22045 Brassica carinata HOM05D008158 ORTHO05D010323 1.7e-06 56.6 33 69.7
AL3G42940 Arabidopsis lyrata HOM05D008158 ORTHO05D010323 2.9e-06 55.8 49 63.3
AL3G43030 Arabidopsis lyrata HOM05D008158 ORTHO05D010323 3.8e-06 55.5 50 62.0
Carub.0003s2677 Capsella rubella HOM05D008158 ORTHO05D010323 3.8e-06 55.5 130 34.6
Carub.0003s2682 Capsella rubella HOM05D008158 ORTHO05D010323 3.8e-06 55.5 49 61.2
EL10Ac9g22777 Beta vulgaris HOM05D008132 ORTHO05D005763 5.0e-06 55.1 27 77.8
Thhalv10002748m.g Eutrema salsugineum HOM05D008158 ORTHO05D010323 5.0e-06 55.1 51 68.6
THA.LOC104815348 Tarenaya hassleriana HOM05D008158 ORTHO05D010323 5.0e-06 55.1 133 46.6
AT2G05440 Arabidopsis thaliana HOM05D008158 ORTHO05D010323 8.5e-06 54.3 46 63.0
Carub.0003s2684 Capsella rubella HOM05D008158 ORTHO05D010323 8.5e-06 54.3 46 67.4


User provided reference genes

Program Settings