Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p44430 Brassica napus HOM05D007186 ORTHO05D008970 1.8e-96 355.9 175 100.0
BraA03t13576Z Brassica rapa HOM05D007186 ORTHO05D008970 7.4e-95 350.5 175 98.9
C03p55120 Brassica napus HOM05D007186 ORTHO05D008970 1.2e-84 316.6 165 93.9
BcaC01g03185 Brassica carinata HOM05D007186 ORTHO05D008970 5.0e-75 284.6 172 83.7
BolC3t17784H Brassica oleracea HOM05D007186 ORTHO05D008970 2.5e-74 282.3 146 94.5
C03p55060 Brassica napus HOM05D007186 ORTHO05D008970 2.1e-73 279.3 146 95.2
BolC3t17781H Brassica oleracea HOM05D007186 ORTHO05D008970 2.1e-73 279.3 146 95.2
BcaC01g03189 Brassica carinata HOM05D007186 ORTHO05D008970 1.0e-72 276.9 146 94.5
Sp3g23400 Schrenkiella parvula HOM05D007186 ORTHO05D008970 2.8e-62 242.3 146 81.5
Carub.0003s2639 Capsella rubella HOM05D007186 ORTHO05D008970 4.8e-62 241.5 146 78.8
Thhalv10002690m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 3.1e-61 238.8 146 79.5
CARHR102760 Cardamine hirsuta HOM05D007186 ORTHO05D008970 6.8e-56 221.1 146 78.1
BcaB08g34487 Brassica carinata HOM05D007186 ORTHO05D008970 1.5e-55 219.9 118 89.8
AL3G42380 Arabidopsis lyrata HOM05D007186 ORTHO05D008970 8.3e-54 214.2 144 73.6
BcaC01g03187 Brassica carinata HOM05D007186 ORTHO05D008970 2.7e-52 209.1 109 93.6
THA.LOC104808856 Tarenaya hassleriana HOM05D007186 ORTHO05D008970 2.1e-49 199.5 149 65.8
MD09G1119400 Malus domestica HOM05D007186 ORTHO05D008970 4.5e-44 181.8 135 62.2
Dinv07835 Davidia involucrata HOM05D007186 ORTHO05D008970 1.2e-41 173.7 140 57.9
AUR62015089 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.6e-41 173.3 137 59.1
AUR62044229 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.6e-41 173.3 137 59.1
AUR62044345 Chenopodium quinoa HOM05D007186 ORTHO05D008970 1.6e-41 173.3 137 59.1
TPR.G15068 Trifolium pratense HOM05D007186 ORTHO05D008970 2.1e-41 172.9 134 59.7
Atru.chr6.3329 Acer truncatum HOM05D007186 ORTHO05D008970 2.8e-41 172.6 150 55.3
Aa31sc53G20 Aethionema arabicum HOM05D007186 ORTHO05D006113 2.8e-41 172.6 131 67.9
AUR62017547 Chenopodium quinoa HOM05D007186 ORTHO05D008970 2.8e-41 172.6 137 58.4
LjContig00081g0025535 Lotus japonicus HOM05D000229 ORTHO05D008970 6.1e-41 171.4 146 55.5
FvH4_6g41490 Fragaria vesca HOM05D007186 ORTHO05D008970 8.0e-41 171.0 133 61.7
Potri.014G162700 Populus trichocarpa HOM05D007186 ORTHO05D008970 1.0e-40 170.6 146 56.2
CiPaw.04G194300 Carya illinoinensis HOM05D007186 ORTHO05D008970 1.4e-40 170.2 135 60.7
FAN05G2361 Fragaria x ananassa HOM05D007186 ORTHO05D008970 1.4e-40 170.2 133 60.2
Gorai.001G219300 Gossypium raimondii HOM05D007186 ORTHO05D008970 1.8e-40 169.9 132 59.1
Medtr5g097970 Medicago truncatula HOM05D007186 ORTHO05D008970 1.8e-40 169.9 134 59.0
Prupe.3G204800 Prunus persica HOM05D007186 ORTHO05D008970 4.0e-40 168.7 135 59.3
PGR142G1014 Punica granatum HOM05D007186 ORTHO05D008970 4.0e-40 168.7 150 55.3
Gohir.D07G195800 Gossypium hirsutum HOM05D007186 ORTHO05D008970 5.2e-40 168.3 132 58.3
RcHm_v2.0_Chr2g0157151 Rosa chinensis HOM05D007186 ORTHO05D008970 5.2e-40 168.3 133 60.2
CANSAT54G2500 Cannabis sativa HOM05D007186 ORTHO05D008970 1.2e-39 167.2 150 55.3
QL08p029418 Quercus lobata HOM05D007186 ORTHO05D008970 1.2e-39 167.2 135 60.0
FAN09G3526 Fragaria x ananassa HOM05D007186 ORTHO05D008970 1.5e-39 166.8 133 60.2
Glyma.02G307400 Glycine max HOM05D007186 ORTHO05D008970 1.5e-39 166.8 135 58.5
Phvul.008G287400 Phaseolus vulgaris HOM05D007186 ORTHO05D008970 1.5e-39 166.8 134 59.0
VMungo0647G1315 Vigna mungo HOM05D007186 ORTHO05D008970 1.5e-39 166.8 134 59.0
Lalb_Chr04g0247191 Lupinus albus HOM05D007186 ORTHO05D008970 2.0e-39 166.4 131 58.8
Hund24136 Selenicereus undatus HOM05D007186 ORTHO05D008970 2.6e-39 166.0 142 55.6
PGSC0003DMG400030273 Solanum tuberosum HOM05D007186 ORTHO05D008970 2.6e-39 166.0 132 59.1
TWI36G0211 Tripterygium wilfordii HOM05D007186 ORTHO05D008970 2.6e-39 166.0 149 55.0
Sopen05g025420 Solanum pennellii HOM05D007186 ORTHO05D008970 5.7e-39 164.9 149 53.7
Ciclev10016992m.g Citrus clementina HOM05D007186 ORTHO05D008970 1.7e-38 163.3 150 56.0
Rhsim06G0171800 Rhododendron simsii HOM05D007186 ORTHO05D008970 1.7e-38 163.3 132 56.1
Sabra14G0124100 Salix brachista HOM05D007186 ORTHO05D008970 1.7e-38 163.3 145 54.5
Solyc05g041430.3 Solanum lycopersicum HOM05D007186 ORTHO05D008970 1.7e-38 163.3 149 53.0
GSVIVG01030422001 Vitis vinifera HOM05D007186 ORTHO05D008970 2.2e-38 162.9 149 51.7
arahy.Tifrunner.gnm1.ann1.HI5B62 Arachis hypogaea HOM05D007186 ORTHO05D008970 1.1e-37 160.6 157 50.3
Duzib138G0377 Durio zibethinus HOM05D007186 ORTHO05D008970 1.4e-37 160.2 132 59.8
Nitab4.5_0011275g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 1.4e-37 160.2 133 57.1
Peaxi162Scf00147g01818 Petunia axillaris HOM05D007186 ORTHO05D008970 1.4e-37 160.2 133 57.1
arahy.Tifrunner.gnm1.ann1.CRYT1U Arachis hypogaea HOM05D007186 ORTHO05D008970 1.8e-37 159.8 145 54.5
COL.COLO4_06941 Corchorus olitorius HOM05D007186 ORTHO05D008970 1.8e-37 159.8 135 57.0
Actinidia07891 Actinidia chinensis HOM05D007186 ORTHO05D008970 3.2e-37 159.1 131 58.0
MELO3C019365.2 Cucumis melo HOM05D007186 ORTHO05D008970 1.2e-36 157.1 146 54.1
Hma1.2p1_0133F.1_g061060 Hydrangea macrophylla HOM05D007186 ORTHO05D008970 2.7e-36 156.0 132 57.6
TAR624G0839 Trochodendron aralioides HOM05D007186 ORTHO05D008970 3.5e-36 155.6 149 50.3
CsaV3_6G009340 Cucumis sativus L. HOM05D007186 ORTHO05D008970 4.6e-36 155.2 146 54.8
Psat2g003840 Pisum sativum HOM05D007186 ORTHO05D008970 4.6e-36 155.2 130 56.9
CSS0038956 Camellia sinensis var. sinensis HOM05D007186 ORTHO05D008970 5.9e-36 154.8 155 51.0
ECA240G1183 Erigeron canadensis HOM05D007186 ORTHO05D008970 5.9e-36 154.8 140 55.0
MBI19_g06151_MAGBIO Magnolia biondii HOM05D007186 ORTHO05D008970 5.9e-36 154.8 131 56.5
Nitab4.5_0002877g0030 Nicotiana tabacum HOM05D007186 ORTHO05D008970 7.8e-36 154.5 132 53.8
Sed0024069 Sechium edule HOM05D007186 ORTHO05D008970 7.8e-36 154.5 149 53.7
unitig_578.g16640 Utricularia gibba HOM05D007186 ORTHO05D008970 2.9e-35 152.5 148 50.7
Manes.13G063846 Manihot esculenta HOM05D007186 ORTHO05D008970 8.6e-35 151.0 150 53.3
PSO675G5362 Papaver somniferum HOM05D007186 ORTHO05D008970 8.6e-35 151.0 139 51.8
HPP92_022801 Vanilla planifolia HOM05D007186 ORTHO05D008970 1.1e-34 150.6 142 52.8
Eucgr.K00670 Eucalyptus grandis HOM05D007186 ORTHO05D008970 4.3e-34 148.7 132 52.3
HanXRQChr03g0075731 Helianthus annuus HOM05D007186 ORTHO05D008970 9.5e-34 147.5 135 55.6
Glyma.14G005600 Glycine max HOM05D007186 ORTHO05D008970 1.6e-33 146.7 132 54.5
Lsat_1_v5_gn_9_105540 Lactuca sativa HOM05D007186 ORTHO05D008970 3.6e-33 145.6 134 54.5
Aqoxy1G02832 Aquilegia oxysepala HOM05D007186 ORTHO05D008970 3.1e-32 142.5 139 51.8
Zm00001eb245650 Zea mays HOM05D007186 ORTHO05D008970 1.2e-31 140.6 139 51.8
ClCG02G009490 Citrullus lanatus HOM05D007186 ORTHO05D008970 2.6e-31 139.4 210 39.5
ATR0712G003 Amborella trichopoda HOM05D007186 ORTHO05D008970 3.4e-31 139.0 136 50.0
Haze_12721 Corylus avellana HOM05D007186 ORTHO05D008970 4.4e-31 138.7 219 39.7
AUR62044292 Chenopodium quinoa HOM05D007186 ORTHO05D008970 8.3e-30 134.4 134 50.0
Os02g0588600 Oryza sativa ssp. japonica HOM05D007186 ORTHO05D008970 9.2e-29 131.0 153 45.8
Migut.M00010 Erythranthe guttata HOM05D007186 ORTHO05D008970 1.2e-28 130.6 138 50.0
SEGI_21441 Sequoiadendron giganteum HOM05D007186 ORTHO05D008970 6.6e-27 124.8 141 43.3
Lj8A132T57 Lonicera japonica HOM05D007186 ORTHO05D008970 5.6e-26 121.7 158 44.3
SalBow7G1582 Salvia bowleyana HOM05D000037 ORTHO05D000150 5.6e-26 121.7 133 46.6
Oeu040479.1 Olea europaea HOM05D007186 ORTHO05D008970 4.9e-22 108.6 97 52.6
FAN14G0401 Fragaria x ananassa HOM05D007186 ORTHO05D008970 1.4e-21 107.1 83 63.9
SMO364G0535 Selaginella moellendorffii HOM05D007186 ORTHO05D008970 1.6e-20 103.6 139 39.6
Pp3c15_5880 Physcomitrium patens HOM05D007186 ORTHO05D008970 4.6e-20 102.1 135 37.8
arahy.Tifrunner.gnm1.ann1.I316DY Arachis hypogaea HOM05D007186 ORTHO05D008970 7.8e-20 101.3 84 53.6
Gohir.A07G189700 Gossypium hirsutum HOM05D007186 ORTHO05D008970 1.0e-19 100.9 76 63.2
Sc20g0003870 Simmondsia chinensis HOM05D007186 ORTHO05D008970 3.0e-19 99.4 88 46.6
Thecc.01G185600 Theobroma cacao HOM05D007186 ORTHO05D008970 3.0e-19 99.4 87 57.5
FAN02G3692 Fragaria x ananassa HOM05D007186 ORTHO05D008970 8.6e-19 97.8 79 60.8
EL10Ac9g22768 Beta vulgaris HOM05D007186 ORTHO05D008970 1.1e-18 97.4 85 55.3
vmacro12130 Vaccinium macrocarpon HOM05D007186 ORTHO05D008970 1.9e-18 96.7 94 54.3
DCAR_032166 Daucus carota HOM05D000693 ORTHO05D008970 4.3e-18 95.5 84 53.6
MSTRG.6661 Avicennia marina HOM05D007186 ORTHO05D008970 9.5e-18 94.4 90 54.4
AT2G04790 Arabidopsis thaliana HOM05D007186 ORTHO05D008970 8.1e-17 91.3 64 71.9
arahy.Tifrunner.gnm1.ann1.ZIY68Y Arachis hypogaea HOM05D007186 ORTHO05D008970 1.4e-16 90.5 84 50.0
Thhalv10002943m.g Eutrema salsugineum HOM05D007186 ORTHO05D008970 1.4e-16 90.5 55 78.2
AUR62025215 Chenopodium quinoa HOM05D007186 ORTHO05D008970 2.2e-14 83.2 67 64.2
Mapoly0123s0026 Marchantia polymorpha HOM05D007186 ORTHO05D008970 1.9e-13 80.1 133 31.6
Nn1g07413 Nelumbo nucifera HOM05D007186 ORTHO05D008970 6.6e-11 71.6 57 54.4
Sopen05g025410 Solanum pennellii HOM05D007186 ORTHO05D008970 1.1e-10 70.9 65 55.4
arahy.Tifrunner.gnm1.ann1.5R4F72 Arachis hypogaea HOM05D007186 ORTHO05D008970 7.3e-10 68.2 86 41.9
Eucgr.K00669 Eucalyptus grandis HOM05D007186 ORTHO05D008970 7.3e-10 68.2 59 45.8


User provided reference genes

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