Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p44050 Brassica napus HOM05D004853 ORTHO05D005865 1.5e-43 179.1 92 100.0
BraA03t13535Z Brassica rapa HOM05D004853 ORTHO05D005865 2.9e-42 174.9 92 97.8
AT3G25100 Arabidopsis thaliana HOM05D004853 ORTHO05D005865 1.9e-33 145.6 79 92.4
BcaB06g26724 Brassica carinata HOM05D004853 ORTHO05D005865 1.9e-33 145.6 79 92.4
BcaC06g35779 Brassica carinata HOM05D004853 ORTHO05D005865 1.9e-33 145.6 79 92.4
A07p07260 Brassica napus HOM05D004853 ORTHO05D005865 1.9e-33 145.6 79 92.4
BolC7t41562H Brassica oleracea HOM05D004853 ORTHO05D005865 1.9e-33 145.6 79 92.4
AL3G40790 Arabidopsis lyrata HOM05D004853 ORTHO05D005865 3.2e-33 144.8 79 91.1
BcaB08g34434 Brassica carinata HOM05D004853 ORTHO05D005865 3.2e-33 144.8 79 92.4
BraA07t28514Z Brassica rapa HOM05D004853 ORTHO05D005865 5.5e-33 144.1 79 91.1
Thhalv10002454m.g Eutrema salsugineum HOM05D004853 ORTHO05D005865 1.2e-32 142.9 79 89.9
Sp3g22680 Schrenkiella parvula HOM05D004853 ORTHO05D005865 1.6e-32 142.5 79 89.9
Carub.0003s2543 Capsella rubella HOM05D004853 ORTHO05D005865 2.7e-32 141.7 79 89.9
BcaC01g03244 Brassica carinata HOM05D004853 ORTHO05D005865 4.7e-32 141.0 79 89.9
C03p54420 Brassica napus HOM05D004853 ORTHO05D005865 4.7e-32 141.0 79 89.9
BolC3t17728H Brassica oleracea HOM05D004853 ORTHO05D005865 4.7e-32 141.0 79 89.9
CARHR101430 Cardamine hirsuta HOM05D004853 ORTHO05D005865 4.7e-32 141.0 79 89.9
BraA03t13534Z Brassica rapa HOM05D004853 ORTHO05D005865 8.0e-32 140.2 79 88.6
Aa31LG8G11930 Aethionema arabicum HOM05D004853 ORTHO05D005865 1.8e-31 139.0 79 88.6
Aa31LG9G4920 Aethionema arabicum HOM05D004853 ORTHO05D005865 1.7e-29 132.5 79 83.5
THA.LOC104808789 Tarenaya hassleriana HOM05D004853 ORTHO05D005865 1.4e-28 129.4 79 79.7
Cpa.g.sc43.113 Carica papaya HOM05D004853 ORTHO05D005865 1.7e-26 122.5 79 72.2
COL.COLO4_15628 Corchorus olitorius HOM05D004853 ORTHO05D005865 3.8e-26 121.3 79 70.9
GSVIVG01000797001 Vitis vinifera HOM05D004853 ORTHO05D005865 3.8e-26 121.3 79 74.7
Eucgr.H00778 Eucalyptus grandis HOM05D004853 ORTHO05D005865 5.0e-26 120.9 79 73.4
Atru.chr6.1420 Acer truncatum HOM05D004853 ORTHO05D005865 8.5e-26 120.2 79 73.4
Cfa004377 Carpinus fangiana HOM05D004853 ORTHO05D005865 1.9e-25 119.0 79 70.9
Sed0013559 Sechium edule HOM05D004853 ORTHO05D005865 2.5e-25 118.6 79 69.6
CiPaw.02G023000 Carya illinoinensis HOM05D004853 ORTHO05D005865 5.5e-25 117.5 79 70.9
Os11g0128400 Oryza sativa ssp. japonica HOM05D004853 ORTHO05D005865 5.5e-25 117.5 79 69.6
Os12g0124700 Oryza sativa ssp. japonica HOM05D004853 ORTHO05D005865 5.5e-25 117.5 79 69.6
QL09p051756 Quercus lobata HOM05D004853 ORTHO05D005865 7.2e-25 117.1 78 70.5
QL09p052469 Quercus lobata HOM05D004853 ORTHO05D005865 7.2e-25 117.1 78 70.5
CiPaw.01G049500 Carya illinoinensis HOM05D004853 ORTHO05D005865 1.2e-24 116.3 79 70.9
MBI19_g34091_MAGBIO Magnolia biondii HOM05D004853 ORTHO05D005865 1.2e-24 116.3 79 68.4
Zm00001eb405460 Zea mays HOM05D004853 ORTHO05D005865 1.2e-24 116.3 79 69.6
Glyma.08G349400 Glycine max HOM05D004853 ORTHO05D005865 1.6e-24 115.9 79 67.1
PSO384G4190 Papaver somniferum HOM05D004853 ORTHO05D005865 1.6e-24 115.9 79 69.6
Thecc.01G221500 Theobroma cacao HOM05D004853 ORTHO05D005865 1.6e-24 115.9 79 68.4
Phvul.008G130700 Phaseolus vulgaris HOM05D004853 ORTHO05D005865 2.1e-24 115.5 79 68.4
TWI36G0697 Tripterygium wilfordii HOM05D004853 ORTHO05D005865 2.1e-24 115.5 79 73.4
TAR623G1093 Trochodendron aralioides HOM05D004853 ORTHO05D005865 2.1e-24 115.5 79 69.6
MSTRG.18839 Avicennia marina HOM05D004853 ORTHO05D005865 3.6e-24 114.8 78 67.9
Manes.13G048900 Manihot esculenta HOM05D004853 ORTHO05D005865 3.6e-24 114.8 78 70.5
Ciclev10019411m.g Citrus clementina HOM05D004853 ORTHO05D005865 4.7e-24 114.4 79 68.4
Gohir.D07G206000 Gossypium hirsutum HOM05D004853 ORTHO05D005865 6.1e-24 114.0 79 65.8
Gohir.D11G145500 Gossypium hirsutum HOM05D004853 ORTHO05D005865 6.1e-24 114.0 79 68.4
Gorai.001G232300 Gossypium raimondii HOM05D004853 ORTHO05D005865 6.1e-24 114.0 79 65.8
CANSAT01G2121 Cannabis sativa HOM05D004853 ORTHO05D005865 8.0e-24 113.6 79 67.1
Nn7g37081 Nelumbo nucifera HOM05D004853 ORTHO05D005865 8.0e-24 113.6 79 68.4
VMungo1383G0658 Vigna mungo HOM05D004853 ORTHO05D005865 8.0e-24 113.6 79 68.4
Duzib138G1868 Durio zibethinus HOM05D004853 ORTHO05D005865 1.4e-23 112.8 79 68.4
Duzib133G1132 Durio zibethinus HOM05D004853 ORTHO05D005865 1.8e-23 112.5 79 67.1
Migut.D02501 Erythranthe guttata HOM05D004853 ORTHO05D005865 1.8e-23 112.5 78 67.9
Gohir.A07G199500 Gossypium hirsutum HOM05D004853 ORTHO05D005865 1.8e-23 112.5 79 65.8
Gohir.A07G199600 Gossypium hirsutum HOM05D004853 ORTHO05D005865 1.8e-23 112.5 79 64.6
Gohir.D07G205900 Gossypium hirsutum HOM05D004853 ORTHO05D005865 1.8e-23 112.5 76 68.4
Lj1g0018468 Lotus japonicus HOM05D004853 ORTHO05D005865 1.8e-23 112.5 79 69.6
Potri.015G090600 Populus trichocarpa HOM05D004853 ORTHO05D005865 1.8e-23 112.5 78 67.9
TAR376G0972 Trochodendron aralioides HOM05D004853 ORTHO05D005865 1.8e-23 112.5 78 67.9
Cc01_g16780 Coffea canephora HOM05D004853 ORTHO05D005865 2.3e-23 112.1 78 67.9
Glyma.18G167000 Glycine max HOM05D004853 ORTHO05D005865 2.3e-23 112.1 79 64.6
Gohir.A11G139300 Gossypium hirsutum HOM05D004853 ORTHO05D005865 2.3e-23 112.1 79 65.8
Gorai.007G156000 Gossypium raimondii HOM05D004853 ORTHO05D005865 2.3e-23 112.1 79 67.1
MD05G1172300 Malus domestica HOM05D004853 ORTHO05D005865 2.3e-23 112.1 76 67.1
MD10G1160500 Malus domestica HOM05D004853 ORTHO05D005865 2.3e-23 112.1 76 67.1
Dinv19180 Davidia involucrata HOM05D004853 ORTHO05D005865 3.0e-23 111.7 79 67.1
CsaV3_7G026150 Cucumis sativus L. HOM05D004853 ORTHO05D005865 4.0e-23 111.3 79 63.3
Medtr7g056153 Medicago truncatula HOM05D004853 ORTHO05D005865 4.0e-23 111.3 79 64.6
Oeu037767.1 Olea europaea HOM05D004853 ORTHO05D005865 4.0e-23 111.3 78 67.9
Prupe.8G199700 Prunus persica HOM05D004853 ORTHO05D005865 4.0e-23 111.3 76 67.1
Rhsim09G0044900 Rhododendron simsii HOM05D004853 ORTHO05D005865 4.0e-23 111.3 78 67.9
EL10Ac7g17891 Beta vulgaris HOM05D004853 ORTHO05D005865 5.2e-23 110.9 79 68.4
CSS0034871 Camellia sinensis var. sinensis HOM05D004853 ORTHO05D005865 5.2e-23 110.9 78 66.7
ClCG09G008800 Citrullus lanatus HOM05D004853 ORTHO05D005865 5.2e-23 110.9 79 62.0
Lsat_1_v5_gn_8_89600 Lactuca sativa HOM05D004853 ORTHO05D005865 5.2e-23 110.9 78 65.4
MELO3C021058.2 Cucumis melo HOM05D004853 ORTHO05D005865 6.8e-23 110.5 79 63.3
Actinidia09471 Actinidia chinensis HOM05D004853 ORTHO05D005865 8.8e-23 110.2 78 67.9
Aqoxy1G00113 Aquilegia oxysepala HOM05D004853 ORTHO05D005865 8.8e-23 110.2 79 65.8
AUR62043704 Chenopodium quinoa HOM05D004853 ORTHO05D005865 1.2e-22 109.8 79 68.4
Ca_06554_v3 Cicer arietinum L. HOM05D004853 ORTHO05D005865 1.2e-22 109.8 79 64.6
Haze_15035 Corylus avellana HOM05D004853 ORTHO05D005865 1.2e-22 109.8 71 71.8
Dinv12655 Davidia involucrata HOM05D004853 ORTHO05D005865 1.2e-22 109.8 78 65.4
SalBow6G4054 Salvia bowleyana HOM05D004853 ORTHO05D005865 1.2e-22 109.8 78 65.4
Peaxi162Scf00238g00032 Petunia axillaris HOM05D004853 ORTHO05D005865 1.5e-22 109.4 78 64.1
AUR62038821 Chenopodium quinoa HOM05D004853 ORTHO05D005865 2.0e-22 109.0 79 68.4
Solyc09g059440.1 Solanum lycopersicum HOM05D004853 ORTHO05D005865 2.0e-22 109.0 78 64.1
Sopen09g022590 Solanum pennellii HOM05D004853 ORTHO05D005865 2.0e-22 109.0 78 64.1
PGSC0003DMG400027946 Solanum tuberosum HOM05D004853 ORTHO05D005865 2.0e-22 109.0 78 64.1
Hma1.2p1_0226F.1_g095440 Hydrangea macrophylla HOM05D004853 ORTHO05D005865 3.4e-22 108.2 78 65.4
Hma1.2p1_2668F.1_g326580 Hydrangea macrophylla HOM05D004853 ORTHO05D005865 3.4e-22 108.2 78 65.4
TPR.G6418 Trifolium pratense HOM05D004853 ORTHO05D005865 4.4e-22 107.8 79 62.0
DCAR_004725 Daucus carota HOM05D004853 ORTHO05D005865 5.7e-22 107.5 78 62.8
DCAR_004733 Daucus carota HOM05D004853 ORTHO05D005865 5.7e-22 107.5 78 62.8
SGA_v2.0_scaffold18G08333 Striga asiatica HOM05D004853 ORTHO05D005865 5.7e-22 107.5 78 64.1
CAN.G257.5 Capsicum annuum HOM05D004853 ORTHO05D005865 7.5e-22 107.1 78 62.8
Nitab4.5_0000045g0440 Nicotiana tabacum HOM05D004853 ORTHO05D005865 7.5e-22 107.1 78 62.8
ECA236G0997 Erigeron canadensis HOM05D004853 ORTHO05D005865 9.8e-22 106.7 78 64.1
RcHm_v2.0_Chr6g0284201 Rosa chinensis HOM05D004853 ORTHO05D005865 9.8e-22 106.7 79 62.0
CDE04G0889 Ceratophyllum demersum HOM05D004853 ORTHO05D005865 1.3e-21 106.3 79 62.0
Lalb_Chr03g0041521 Lupinus albus HOM05D004853 ORTHO05D005865 1.3e-21 106.3 79 65.8
Nitab4.5_0007437g0010 Nicotiana tabacum HOM05D004853 ORTHO05D005865 1.3e-21 106.3 78 62.8
CAN.G128.1 Capsicum annuum HOM05D004853 ORTHO05D005865 1.7e-21 105.9 78 61.5
FAN27G1226 Fragaria x ananassa HOM05D004853 ORTHO05D005865 1.7e-21 105.9 79 59.5
Psat3g148200 Pisum sativum HOM05D004853 ORTHO05D005865 1.7e-21 105.9 79 59.5
FvH4_2g18640 Fragaria vesca HOM05D004853 ORTHO05D005865 2.2e-21 105.5 79 59.5
FAN15G3437 Fragaria x ananassa HOM05D004853 ORTHO05D005865 2.2e-21 105.5 79 59.5
HanXRQChr10g0288791 Helianthus annuus HOM05D004853 ORTHO05D005865 2.2e-21 105.5 78 62.8
HanXRQChr14g0439971 Helianthus annuus HOM05D004853 ORTHO05D005865 2.2e-21 105.5 78 62.8
FAN24G1506 Fragaria x ananassa HOM05D004853 ORTHO05D005865 2.8e-21 105.1 79 59.5
CSS0030898 Camellia sinensis var. sinensis HOM05D004853 ORTHO05D005865 4.8e-21 104.4 81 60.5
Sc17g0002190 Simmondsia chinensis HOM05D004853 ORTHO05D005865 4.8e-21 104.4 77 63.6
Actinidia23713 Actinidia chinensis HOM05D004853 ORTHO05D005865 8.3e-21 103.6 75 65.3
Lj3C839T9 Lonicera japonica HOM05D004853 ORTHO05D005865 1.1e-20 103.2 72 65.3
arahy.Tifrunner.gnm1.ann1.23GIHT Arachis hypogaea HOM05D004853 ORTHO05D005865 3.1e-20 101.7 77 63.6
unitig_736.g22343 Utricularia gibba HOM05D004853 ORTHO05D005865 5.4e-20 100.9 79 63.3
unitig_899.g15017 Utricularia gibba HOM05D004853 ORTHO05D005865 5.4e-20 100.9 79 63.3
Sabra15G0112700 Salix brachista HOM05D004853 ORTHO05D005865 1.2e-19 99.8 78 61.5
CDE07G1728 Ceratophyllum demersum HOM05D004853 ORTHO05D005865 4.5e-19 97.8 72 59.7
ATR0068G062 Amborella trichopoda HOM05D004853 ORTHO05D005865 2.8e-16 88.6 79 55.7
Ah.15g093470 Amaranthus hybridus HOM05D004853 ORTHO05D005865 1.5e-14 82.8 65 67.7
SEGI_13565 Sequoiadendron giganteum HOM05D004853 ORTHO05D005865 1.4e-12 76.3 78 51.3
AagrBONN_evm.TU.Sc2ySwM_117.731 Anthoceros agrestis HOM05D004853 ORTHO05D005865 5.0e-10 67.8 62 53.2
Gorai.001G232100 Gossypium raimondii HOM05D004853 ORTHO05D005865 1.1e-09 66.6 43 67.4
SMO307G0064 Selaginella moellendorffii HOM05D004853 ORTHO05D005865 7.3e-09 63.9 77 42.9
C07p10970 Brassica napus HOM05D004853 ORTHO05D005865 8.9e-07 57.0 29 93.1
Mapoly0045s0042 Marchantia polymorpha HOM05D004853 ORTHO05D005865 2.0e-06 55.8 78 44.9
Pp3c23_19980 Physcomitrium patens HOM05D004853 ORTHO05D005865 3.4e-06 55.1 79 40.5


User provided reference genes

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