Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
A03p43050 Brassica napus HOM05D007902 ORTHO05D009839 4.9e-72 274.2 127 100.0
A09p12450 Brassica napus HOM05D007902 ORTHO05D009839 1.3e-69 266.2 127 97.6
BraA07t29812Z Brassica rapa HOM05D007902 ORTHO05D009839 1.1e-39 166.8 80 97.5
BraA10t45132Z Brassica rapa HOM05D007902 ORTHO05D009839 4.0e-34 148.3 95 78.9
C09p71380 Brassica napus HOM05D007902 ORTHO05D009839 9.0e-34 147.1 96 79.2
BolC9t59901H Brassica oleracea HOM05D007902 ORTHO05D009839 2.0e-33 146.0 96 78.1
BcaC06g32241 Brassica carinata HOM05D007902 ORTHO05D009839 2.2e-32 142.5 96 78.1
BcaB05g21722 Brassica carinata HOM05D007902 ORTHO05D009839 4.6e-30 134.8 79 81.0
Thhalv10014946m.g Eutrema salsugineum HOM05D007902 ORTHO05D009839 3.0e-29 132.1 81 79.0
BraA02t04842Z Brassica rapa HOM05D007902 ORTHO05D009839 7.4e-28 127.5 81 79.0
AT5G05330 Arabidopsis thaliana HOM05D007902 ORTHO05D009839 4.8e-27 124.8 81 75.3
Sp6g37500 Schrenkiella parvula HOM05D007902 ORTHO05D009839 6.2e-27 124.4 79 81.0
Carub.0006s0425 Capsella rubella HOM05D007902 ORTHO05D009839 8.2e-27 124.0 81 75.3
C02p02280 Brassica napus HOM05D007902 ORTHO05D009839 1.8e-26 122.9 81 75.3
AL6G15200 Arabidopsis lyrata HOM05D007902 ORTHO05D009839 3.1e-26 122.1 81 75.3
BolC2t06195H Brassica oleracea HOM05D007902 ORTHO05D009839 3.1e-26 122.1 81 75.3
CARHR207920 Cardamine hirsuta HOM05D007902 ORTHO05D009839 3.1e-26 122.1 82 78.0
BcaC03g13156 Brassica carinata HOM05D007902 ORTHO05D009839 5.3e-26 121.3 81 75.3
A08p12840 Brassica napus HOM05D007902 ORTHO05D009839 7.1e-23 110.9 85 65.9
BolC1t05278H Brassica oleracea HOM05D000689 ORTHO05D000015 3.8e-16 88.6 70 58.6
BcaC08g44616 Brassica carinata HOM05D000689 ORTHO05D000015 3.2e-15 85.5 63 63.5
C06p20880 Brassica napus HOM05D000689 ORTHO05D000015 3.2e-15 85.5 63 63.5
BolC6t37276H Brassica oleracea HOM05D000689 ORTHO05D000015 3.2e-15 85.5 63 63.5
Gohir.A13G005700 Gossypium hirsutum HOM05D007902 ORTHO05D009839 1.8e-10 69.7 80 46.2
Gohir.D13G005400 Gossypium hirsutum HOM05D007902 ORTHO05D009839 3.1e-10 68.9 80 46.2
Gorai.013G006100 Gossypium raimondii HOM05D007902 ORTHO05D009839 3.1e-10 68.9 80 46.2
BcaC07g40405 Brassica carinata HOM05D000689 ORTHO05D000015 1.2e-09 67.0 63 52.4
BcaC07g40549 Brassica carinata HOM05D000689 ORTHO05D000015 1.2e-09 67.0 63 52.4
C08p35040 Brassica napus HOM05D000689 ORTHO05D000015 1.2e-09 67.0 63 52.4
A09p52200 Brassica napus HOM05D000212 ORTHO05D000015 1.5e-09 66.6 63 52.4
BolC8t51087H Brassica oleracea HOM05D000212 ORTHO05D000015 2.0e-09 66.2 63 52.4
AL5G41630 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 2.6e-09 65.9 63 50.8
Eucgr.G03123 Eucalyptus grandis HOM05D007902 ORTHO05D009839 4.5e-09 65.1 79 41.8
Thecc.10G175100 Theobroma cacao HOM05D007902 ORTHO05D009839 1.0e-08 63.9 81 42.0
AL5G41960 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 1.3e-08 63.5 41 68.3
Carub.0005s2634 Capsella rubella HOM05D000689 ORTHO05D000015 1.3e-08 63.5 63 49.2
BolC8t51107H Brassica oleracea HOM05D000689 ORTHO05D000015 1.7e-08 63.2 38 73.7
C03p78260 Brassica napus HOM05D013651 ORTHO05D013480 2.2e-08 62.8 50 64.0
C08p15980 Brassica napus HOM05D013651 ORTHO05D013480 2.2e-08 62.8 50 64.0
Thhalv10025492m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 2.2e-08 62.8 41 68.3
BcaC07g40441 Brassica carinata HOM05D000689 ORTHO05D000015 2.9e-08 62.4 41 68.3
BolC7t44774H Brassica oleracea HOM05D013651 ORTHO05D013480 2.9e-08 62.4 58 53.4
Cpa.g.sc19.89 Carica papaya HOM05D007902 ORTHO05D009839 2.9e-08 62.4 81 45.7
BcaC07g40547 Brassica carinata HOM05D000689 ORTHO05D000015 3.8e-08 62.0 41 70.7
C08p34860 Brassica napus HOM05D000689 ORTHO05D000015 3.8e-08 62.0 41 70.7
BolC4t23447H Brassica oleracea HOM05D013651 ORTHO05D013480 3.8e-08 62.0 58 53.4
C07p42470 Brassica napus HOM05D013651 ORTHO05D013480 5.0e-08 61.6 52 57.7
AL5G41650 Arabidopsis lyrata HOM05D000689 ORTHO05D000015 6.5e-08 61.2 39 69.2
Carub.0005s2659 Capsella rubella HOM05D000689 ORTHO05D000015 8.5e-08 60.8 41 63.4
BolC3t17907H Brassica oleracea HOM05D000689 ORTHO05D000015 1.4e-07 60.1 59 50.8
Hma1.2p1_0292F.1_g115760 Hydrangea macrophylla HOM05D007902 ORTHO05D009839 1.9e-07 59.7 79 41.8
A03p45320 Brassica napus HOM05D000689 ORTHO05D000015 2.5e-07 59.3 59 50.8
BolC6t36021H Brassica oleracea HOM05D013651 ORTHO05D013480 2.5e-07 59.3 58 51.7
BcaC02g09961 Brassica carinata HOM05D001334 ORTHO05D001119 3.2e-07 58.9 41 65.9
A09p52220 Brassica napus HOM05D000689 ORTHO05D000015 3.2e-07 58.9 41 63.4
C04p34590 Brassica napus HOM05D000108 ORTHO05D012076 3.2e-07 58.9 41 65.9
BolC4t25019H Brassica oleracea HOM05D000108 ORTHO05D012076 3.2e-07 58.9 41 65.9
Thhalv10006459m.g Eutrema salsugineum HOM05D000689 ORTHO05D000015 3.2e-07 58.9 42 69.0
Potri.019G049100 Populus trichocarpa HOM05D007902 ORTHO05D009839 3.2e-07 58.9 82 43.9
Manes.07G138200 Manihot esculenta HOM05D007902 ORTHO05D009839 4.2e-07 58.5 81 42.0
TAR623G0347 Trochodendron aralioides HOM05D007902 ORTHO05D009839 4.2e-07 58.5 77 42.9
TWI53G0910 Tripterygium wilfordii HOM05D007902 ORTHO05D009839 5.5e-07 58.2 82 41.5
AT3G59460 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 7.2e-07 57.8 42 64.3
Sabra19G0058600 Salix brachista HOM05D007902 ORTHO05D009839 7.2e-07 57.8 82 42.7
Actinidia07804 Actinidia chinensis HOM05D007902 ORTHO05D009839 9.4e-07 57.4 79 43.0
EL10Ac2g04265 Beta vulgaris HOM05D007902 ORTHO05D009839 9.4e-07 57.4 113 30.1
BcaC07g40395 Brassica carinata HOM05D000689 ORTHO05D000015 9.4e-07 57.4 41 63.4
QL08p064506 Quercus lobata HOM05D007902 ORTHO05D009839 1.6e-06 56.6 83 39.8
Migut.F00588 Erythranthe guttata HOM05D007902 ORTHO05D009839 3.6e-06 55.5 80 38.8
BolC3t20084H Brassica oleracea HOM05D013651 ORTHO05D013480 6.1e-06 54.7 56 51.8
Carub.0005s1509 Capsella rubella HOM05D000689 ORTHO05D000015 6.1e-06 54.7 41 61.0
HanXRQChr09g0251491 Helianthus annuus HOM05D007902 ORTHO05D009839 7.9e-06 54.3 80 42.5


User provided reference genes

Program Settings